FFCP PHASE1:Mm9::chr18:68558585..68558589,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=28|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:68558585..68558589,+|id=chr18:68558585..68558589,+|ontology_enrichment_celltype=CL:0002027!6.98e-10!3;CL:0002006!6.98e-10!3;CL:0002024!6.98e-10!3;CL:0000553!5.79e-08!6;CL:0000556!5.79e-08!6|ontology_enrichment_celltype_v019_2=CL:0002027,6.04e-65,3;CL:0002006,6.04e-65,3;CL:0002024,6.04e-65,3;CL:0000553,4.33e-33,6;CL:0000556,4.33e-33,6;CL:0000050,1.96e-22,9;CL:0000839,7.54e-16,13;CL:0000763,4.65e-13,16;CL:0000049,3.83e-11,19;CL:0002031,1.11e-08,25;CL:0000988,5.85e-07,32;CL:0002032,5.85e-07,32;CL:0000037,5.85e-07,32;CL:0000837,5.85e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!7.07e-12!6;UBERON:0004457!7.07e-12!6;UBERON:0000042!7.07e-12!6;UBERON:0004854!7.07e-12!6;UBERON:0009034!7.07e-12!6;UBERON:0002095!7.07e-12!6;UBERON:0004782!7.07e-12!6;UBERON:0003281!7.07e-12!6;UBERON:0009664!7.07e-12!6;UBERON:0002296!7.07e-12!6;UBERON:0005602!7.07e-12!6;UBERON:0001179!7.07e-12!6;UBERON:0006293!7.07e-12!6;UBERON:0003887!8.87e-10!10|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-13,16;UBERON:0001474,9.57e-10,22;UBERON:0004765,9.57e-10,22;UBERON:0001434,9.57e-10,22;UBERON:0002204,5.85e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,2.09868563438444,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,5.26104639716185,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.683483523191411,0,0.740778109478847,0.188368457004691,0.683471138605126,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:68558585..68558589,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=28 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:68558585..68558589,+ | |||
|id=chr18:68558585..68558589,+ | |||
|ontology_enrichment_celltype=CL:0002027!6.98e-10!3;CL:0002006!6.98e-10!3;CL:0002024!6.98e-10!3;CL:0000553!5.79e-08!6;CL:0000556!5.79e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,6.04e-65,3;CL:0002006,6.04e-65,3;CL:0002024,6.04e-65,3;CL:0000553,4.33e-33,6;CL:0000556,4.33e-33,6;CL:0000050,1.96e-22,9;CL:0000839,7.54e-16,13;CL:0000763,4.65e-13,16;CL:0000049,3.83e-11,19;CL:0002031,1.11e-08,25;CL:0000988,5.85e-07,32;CL:0002032,5.85e-07,32;CL:0000037,5.85e-07,32;CL:0000837,5.85e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!7.07e-12!6;UBERON:0004457!7.07e-12!6;UBERON:0000042!7.07e-12!6;UBERON:0004854!7.07e-12!6;UBERON:0009034!7.07e-12!6;UBERON:0002095!7.07e-12!6;UBERON:0004782!7.07e-12!6;UBERON:0003281!7.07e-12!6;UBERON:0009664!7.07e-12!6;UBERON:0002296!7.07e-12!6;UBERON:0005602!7.07e-12!6;UBERON:0001179!7.07e-12!6;UBERON:0006293!7.07e-12!6;UBERON:0003887!8.87e-10!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.65e-13,16;UBERON:0001474,9.57e-10,22;UBERON:0004765,9.57e-10,22;UBERON:0001434,9.57e-10,22;UBERON:0002204,5.85e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,2.09868563438444,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,5.26104639716185,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393117990226406,0.449724224769707,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.683483523191411,0,0.740778109478847,0.188368457004691,0.683471138605126,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:68558585..68558589,+ | |||
}} |
Revision as of 16:40, 13 September 2013
Short description: | p@chr18:68558585..68558589, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:68558585..68558589, + |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 6.04e-65 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.04e-65 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.04e-65 | 3 |
megakaryocyte progenitor cell | 4.33e-33 | 6 |
megakaryocyte | 4.33e-33 | 6 |
megakaryocyte-erythroid progenitor cell | 1.96e-22 | 9 |
myeloid lineage restricted progenitor cell | 7.54e-16 | 13 |
myeloid cell | 4.65e-13 | 16 |
common myeloid progenitor | 3.83e-11 | 19 |
hematopoietic lineage restricted progenitor cell | 1.11e-08 | 25 |
hematopoietic cell | 5.85e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.85e-07 | 32 |
hematopoietic stem cell | 5.85e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.85e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.65e-13 | 16 |
bone element | 9.57e-10 | 22 |
skeletal element | 9.57e-10 | 22 |
skeletal system | 9.57e-10 | 22 |
musculoskeletal system | 5.85e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.