Personal tools

FFCP PHASE1:Mm9::chr19:37772353..37772360,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=13082|HGNC=|MCL_coexpression_id=277|UniProt=O55127|association_with_transcript=55bp_to_ENSMUST00000025946,NM_007811,uc008his.2_5end|description=CAGE_peak_1_at_Cyp26a1_5end|id=chr19:37772353..37772360,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.63e-14,5;CL:0000107,3.66e-13,9;CL:0000349,7.75e-09,3;CL:0000351,7.75e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.20e-18,9;UBERON:0000019,5.20e-18,9;UBERON:0000047,5.20e-18,9;UBERON:0010312,5.20e-18,9;UBERON:0004088,5.20e-18,9;UBERON:0002104,5.20e-18,9;UBERON:0001456,5.20e-18,9;UBERON:0003072,5.20e-18,9;UBERON:0004128,5.20e-18,9;UBERON:0003071,5.20e-18,9;UBERON:0001444,1.69e-14,11;UBERON:0000020,3.51e-13,12;UBERON:0001032,3.51e-13,12;UBERON:0004456,3.51e-13,12;UBERON:0002410,3.66e-13,9;UBERON:0000033,4.56e-12,13;UBERON:0005085,4.56e-12,13;UBERON:0000010,1.34e-10,11;UBERON:0002107,3.15e-09,22;UBERON:0007499,3.15e-09,22;UBERON:0006925,3.15e-09,22;UBERON:0009497,3.15e-09,22;UBERON:0000015,3.15e-09,22;UBERON:0002423,3.15e-09,22;UBERON:0006235,3.15e-09,22;UBERON:0008835,3.15e-09,22;UBERON:0003894,3.15e-09,22;UBERON:0004161,3.15e-09,22;UBERON:0008836,3.15e-09,22;UBERON:0000358,7.75e-09,3;UBERON:0000307,7.75e-09,3;UBERON:0007010,7.75e-09,3;UBERON:0009854,9.43e-09,23;UBERON:0009856,9.43e-09,23;UBERON:0010313,9.89e-09,3;UBERON:0002342,9.89e-09,3;UBERON:0002005,9.89e-09,3;UBERON:0005428,9.89e-09,3;UBERON:0005062,9.89e-09,3;UBERON:0000011,4.13e-08,3;UBERON:0002365,6.47e-08,25;UBERON:0002330,6.47e-08,25|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0,0.0755715601067855,1.15945795480671,29.2544118173671,107.435470725825,18.8896117073236,65.6274181622146,39.8743929516629,2.80888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,2.05530983494308,0,0.445326417194474,0.346970653532272,0,0,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0.758168275301024,0,3.6433724029557,5.28774840196988,5.22180176435513,3.76762044589288,6.05524842446818,3.58718416797579,3.84177070694888,1.29351685369508,0.646703978798527,0.189106080167819,1.40760899331159,0.657587197282725,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.987359099480883,0.820837320395476,0.243206428637567,0.146199987425332,0.219550115291051,0.536825675041487,0.210289948564127,0,0,0,0.639864751605702,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.350679099451593,0.252946148497029,0,0.156998727841375,0,17.7871576252289,0,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,7.53469136792031,12.0610880340842,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.504941854408746,2.83957397474631,5.46614242015294,5.17016154558717,3.58453196928828,2.67358408898873,1.69845918473299,0,0.292255857911312,1.18586333383957,0,3.12268187458191,0,0,1.64970122972535,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,1.44048875225048,0.517434735131018,0.857348140126369,0.709360934569094,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0,0.238744688006273,0.656563598980245,0,0,0,0.619160603889667,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.966336483304024,0.576060012515731,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.596044064343795,0.120195449519969,0.443068581523732,0.403865799792591,0.381034033274999,0.201652370273681,0.194915761479505,0.288635524920988,0,0,3.7737612073591,12.829081495155,3.18980771091749,0,24.5864042841048,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.682934423016537,0.729320151204882,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.811190281613988,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0,0.282328141245992,0,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843|short_description=p1@Cyp26a1}}
|EntrezGene=13082
|HGNC=
|MCL_coexpression_id=277
|UniProt=O55127
|association_with_transcript=55bp_to_ENSMUST00000025946,NM_007811,uc008his.2_5end
|description=CAGE_peak_1_at_Cyp26a1_5end
|id=chr19:37772353..37772360,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,1.63e-14,5;CL:0000107,3.66e-13,9;CL:0000349,7.75e-09,3;CL:0000351,7.75e-09,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.20e-18,9;UBERON:0000019,5.20e-18,9;UBERON:0000047,5.20e-18,9;UBERON:0010312,5.20e-18,9;UBERON:0004088,5.20e-18,9;UBERON:0002104,5.20e-18,9;UBERON:0001456,5.20e-18,9;UBERON:0003072,5.20e-18,9;UBERON:0004128,5.20e-18,9;UBERON:0003071,5.20e-18,9;UBERON:0001444,1.69e-14,11;UBERON:0000020,3.51e-13,12;UBERON:0001032,3.51e-13,12;UBERON:0004456,3.51e-13,12;UBERON:0002410,3.66e-13,9;UBERON:0000033,4.56e-12,13;UBERON:0005085,4.56e-12,13;UBERON:0000010,1.34e-10,11;UBERON:0002107,3.15e-09,22;UBERON:0007499,3.15e-09,22;UBERON:0006925,3.15e-09,22;UBERON:0009497,3.15e-09,22;UBERON:0000015,3.15e-09,22;UBERON:0002423,3.15e-09,22;UBERON:0006235,3.15e-09,22;UBERON:0008835,3.15e-09,22;UBERON:0003894,3.15e-09,22;UBERON:0004161,3.15e-09,22;UBERON:0008836,3.15e-09,22;UBERON:0000358,7.75e-09,3;UBERON:0000307,7.75e-09,3;UBERON:0007010,7.75e-09,3;UBERON:0009854,9.43e-09,23;UBERON:0009856,9.43e-09,23;UBERON:0010313,9.89e-09,3;UBERON:0002342,9.89e-09,3;UBERON:0002005,9.89e-09,3;UBERON:0005428,9.89e-09,3;UBERON:0005062,9.89e-09,3;UBERON:0000011,4.13e-08,3;UBERON:0002365,6.47e-08,25;UBERON:0002330,6.47e-08,25
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0,0.0755715601067855,1.15945795480671,29.2544118173671,107.435470725825,18.8896117073236,65.6274181622146,39.8743929516629,2.80888840263504,0,0,0,0.845060518660083,0,0,0,0,0,0,2.05530983494308,0,0.445326417194474,0.346970653532272,0,0,0,0,0,0,0,0,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0.124406970610093,0.758168275301024,0,3.6433724029557,5.28774840196988,5.22180176435513,3.76762044589288,6.05524842446818,3.58718416797579,3.84177070694888,1.29351685369508,0.646703978798527,0.189106080167819,1.40760899331159,0.657587197282725,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.154267112887378,0.232533944750408,0,0.233530684734339,0.987359099480883,0.820837320395476,0.243206428637567,0.146199987425332,0.219550115291051,0.536825675041487,0.210289948564127,0,0,0,0.639864751605702,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0.350679099451593,0.252946148497029,0,0.156998727841375,0,17.7871576252289,0,0.393117990226406,0,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,7.53469136792031,12.0610880340842,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.504941854408746,2.83957397474631,5.46614242015294,5.17016154558717,3.58453196928828,2.67358408898873,1.69845918473299,0,0.292255857911312,1.18586333383957,0,3.12268187458191,0,0,1.64970122972535,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,1.44048875225048,0.517434735131018,0.857348140126369,0.709360934569094,0.178368817602071,0.329098041204242,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0,0,0.238744688006273,0.656563598980245,0,0,0,0.619160603889667,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,0.209088296014469,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0.966336483304024,0.576060012515731,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0.596044064343795,0.120195449519969,0.443068581523732,0.403865799792591,0.381034033274999,0.201652370273681,0.194915761479505,0.288635524920988,0,0,3.7737612073591,12.829081495155,3.18980771091749,0,24.5864042841048,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.682934423016537,0.729320151204882,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.811190281613988,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0,0.282328141245992,0,0.182927972872773,0,0.135804113845862,0,0,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.463735671240843
|short_description=p1@Cyp26a1
}}

Revision as of 17:30, 13 September 2013

Short description:p1@Cyp26a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cyp26a1_5end
Coexpression cluster:MCL_coexpression_mm9:277
Association with transcript: 55bp_to_ENSMUST00000025946, NM_007811, uc008his.2_5end
EntrezGene:Cyp26a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cyp26a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F729.25
Mouse hepatocyte, donor1.CNhs13078.11714-123C4107.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F465.63
Mouse hepatocyte, donor8.CNhs13091.11824-124F639.87
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B217.79
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H17.53
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F524.59
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte1.63e-145
autonomic neuron3.66e-139
extraembryonic cell7.75e-093
trophoblast cell7.75e-093

Uber anatomy
Ontology termp-valuen
eye5.20e-189
camera-type eye5.20e-189
simple eye5.20e-189
immature eye5.20e-189
ocular region5.20e-189
visual system5.20e-189
face5.20e-189
optic cup5.20e-189
optic vesicle5.20e-189
eye primordium5.20e-189
subdivision of head1.69e-1411
sense organ3.51e-1312
sensory system3.51e-1312
entire sense organ system3.51e-1312
autonomic nervous system3.66e-139
head4.56e-1213
ectodermal placode4.56e-1213
peripheral nervous system1.34e-1011
liver3.15e-0922
epithelial sac3.15e-0922
digestive gland3.15e-0922
epithelium of foregut-midgut junction3.15e-0922
anatomical boundary3.15e-0922
hepatobiliary system3.15e-0922
foregut-midgut junction3.15e-0922
hepatic diverticulum3.15e-0922
liver primordium3.15e-0922
septum transversum3.15e-0922
liver bud3.15e-0922
blastocyst7.75e-093
blastula7.75e-093
cleaving embryo7.75e-093
digestive tract diverticulum9.43e-0923
sac9.43e-0923
neural crest-derived structure9.89e-093
neural crest9.89e-093
enteric nervous system9.89e-093
vagal neural crest9.89e-093
neural fold9.89e-093
parasympathetic nervous system4.13e-083
exocrine gland6.47e-0825
exocrine system6.47e-0825







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:37772353..37772360,%2B&oldid=2957534"