FFCP PHASE1:Mm9::chr19:46728523..46728531,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:46728523..46728531,+|id=chr19:46728523..46728531,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.00e-08,9;CL:0002610,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,5.11e-24,3;DOID:4045,5.11e-24,3;DOID:0050686,1.41e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.00e-08,9;UBERON:0002036,1.00e-08,9;UBERON:0002385,1.00e-08,9;UBERON:0000486,1.00e-08,9;UBERON:0007503,1.00e-08,9;UBERON:0001015,1.00e-08,9;UBERON:0002329,1.00e-08,9;UBERON:0003082,1.00e-08,9;UBERON:0003059,1.00e-08,9;UBERON:0007282,1.00e-08,9;UBERON:0004290,1.00e-08,9;UBERON:0009618,1.00e-08,9;UBERON:0000383,5.99e-08,10;UBERON:0007524,2.59e-07,11;UBERON:0003077,2.59e-07,11;UBERON:0007285,2.59e-07,11;UBERON:0004684,5.46e-07,3;UBERON:0002275,5.46e-07,3|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,0.523523743973798,13.5293242247133,4.78131839470912,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0.412773735926445,0.555583582109135,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.39736270956253,0,0,0.100966449948148,0.15241361331,0.201652370273681,0,0,0.350630706544707,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p@chr19:46728523..46728531,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:46728523..46728531,+ | |||
|id=chr19:46728523..46728531,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.00e-08,9;CL:0002610,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.11e-24,3;DOID:4045,5.11e-24,3;DOID:0050686,1.41e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.00e-08,9;UBERON:0002036,1.00e-08,9;UBERON:0002385,1.00e-08,9;UBERON:0000486,1.00e-08,9;UBERON:0007503,1.00e-08,9;UBERON:0001015,1.00e-08,9;UBERON:0002329,1.00e-08,9;UBERON:0003082,1.00e-08,9;UBERON:0003059,1.00e-08,9;UBERON:0007282,1.00e-08,9;UBERON:0004290,1.00e-08,9;UBERON:0009618,1.00e-08,9;UBERON:0000383,5.99e-08,10;UBERON:0007524,2.59e-07,11;UBERON:0003077,2.59e-07,11;UBERON:0007285,2.59e-07,11;UBERON:0004684,5.46e-07,3;UBERON:0002275,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,1.5626706890476,0.523523743973798,13.5293242247133,4.78131839470912,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0.539703191637817,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0.412773735926445,0.555583582109135,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.39736270956253,0,0,0.100966449948148,0.15241361331,0.201652370273681,0,0,0.350630706544707,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr19:46728523..46728531,+ | |||
}} |
Revision as of 17:53, 13 September 2013
Short description: | p@chr19:46728523..46728531, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46728523..46728531, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.00e-08 | 9 |
raphe nuclei neuron | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.00e-08 | 9 |
striated muscle tissue | 1.00e-08 | 9 |
muscle tissue | 1.00e-08 | 9 |
multilaminar epithelium | 1.00e-08 | 9 |
epithelial vesicle | 1.00e-08 | 9 |
musculature | 1.00e-08 | 9 |
somite | 1.00e-08 | 9 |
myotome | 1.00e-08 | 9 |
presomitic mesoderm | 1.00e-08 | 9 |
presumptive segmental plate | 1.00e-08 | 9 |
dermomyotome | 1.00e-08 | 9 |
trunk paraxial mesoderm | 1.00e-08 | 9 |
musculature of body | 5.99e-08 | 10 |
dense mesenchyme tissue | 2.59e-07 | 11 |
paraxial mesoderm | 2.59e-07 | 11 |
presumptive paraxial mesoderm | 2.59e-07 | 11 |
raphe nuclei | 5.46e-07 | 3 |
reticular formation | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.11e-24 | 3 |
muscle cancer | 5.11e-24 | 3 |
organ system cancer | 1.41e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.