FFCP PHASE1:Mm9::chr19:47932377..47932386,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47932377..47932386,-|id=chr19:47932377..47932386,-|ontology_enrichment_celltype=CL:0000068!9.40e-10!3;CL:0002202!9.40e-10!3;CL:0000069!9.40e-10!3;CL:0002632!9.40e-10!3;CL:0002368!9.40e-10!3;CL:0000307!9.40e-10!3;CL:0000377!9.40e-10!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.33e-65,3;CL:0002202,1.33e-65,3;CL:0000069,1.33e-65,3;CL:0002632,1.33e-65,3;CL:0002368,1.33e-65,3;CL:0000307,1.33e-65,3;CL:0000377,1.33e-65,3;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!9.40e-10!3;UBERON:0001005!9.40e-10!3;UBERON:0007196!9.40e-10!3;UBERON:0001558!9.40e-10!3;UBERON:0000945!2.54e-07!16;UBERON:0010039!2.54e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.33e-65,3;UBERON:0001005,1.33e-65,3;UBERON:0007196,1.33e-65,3;UBERON:0001558,1.33e-65,3;UBERON:0000996,1.39e-22,1;UBERON:0005178,1.84e-12,17;UBERON:0005181,1.84e-12,17;UBERON:0002224,1.84e-12,17;UBERON:0000915,1.84e-12,17;UBERON:0008947,1.84e-12,17;UBERON:0003258,1.84e-12,17;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0000072,3.59e-08,27|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97929394325792,3.29367825117628,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0.418176592028937,0.218362563746178,0.404593039154462,0,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr19:47932377..47932386,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:47932377..47932386,- | |||
|id=chr19:47932377..47932386,- | |||
|ontology_enrichment_celltype=CL:0000068!9.40e-10!3;CL:0002202!9.40e-10!3;CL:0000069!9.40e-10!3;CL:0002632!9.40e-10!3;CL:0002368!9.40e-10!3;CL:0000307!9.40e-10!3;CL:0000377!9.40e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.33e-65,3;CL:0002202,1.33e-65,3;CL:0000069,1.33e-65,3;CL:0002632,1.33e-65,3;CL:0002368,1.33e-65,3;CL:0000307,1.33e-65,3;CL:0000377,1.33e-65,3;CL:0002076,5.35e-14,15;CL:0000223,9.91e-11,20;CL:0000066,9.29e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!9.40e-10!3;UBERON:0001005!9.40e-10!3;UBERON:0007196!9.40e-10!3;UBERON:0001558!9.40e-10!3;UBERON:0000945!2.54e-07!16;UBERON:0010039!2.54e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.33e-65,3;UBERON:0001005,1.33e-65,3;UBERON:0007196,1.33e-65,3;UBERON:0001558,1.33e-65,3;UBERON:0000996,1.39e-22,1;UBERON:0005178,1.84e-12,17;UBERON:0005181,1.84e-12,17;UBERON:0002224,1.84e-12,17;UBERON:0000915,1.84e-12,17;UBERON:0008947,1.84e-12,17;UBERON:0003258,1.84e-12,17;UBERON:0000162,1.88e-08,3;UBERON:0001353,1.88e-08,3;UBERON:0000163,1.88e-08,3;UBERON:0006866,1.88e-08,3;UBERON:0001046,1.88e-08,3;UBERON:0000164,1.88e-08,3;UBERON:0000931,1.88e-08,3;UBERON:0000072,3.59e-08,27 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97929394325792,3.29367825117628,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.597423819763102,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345369963731791,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0,0,0.418176592028937,0.218362563746178,0.404593039154462,0,0.785267825952089,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0,0,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:47932377..47932386,- | |||
}} |
Revision as of 17:57, 13 September 2013
Short description: | p@chr19:47932377..47932386, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47932377..47932386, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.33e-65 | 3 |
epithelial cell of tracheobronchial tree | 1.33e-65 | 3 |
branched duct epithelial cell | 1.33e-65 | 3 |
epithelial cell of lower respiratory tract | 1.33e-65 | 3 |
respiratory epithelial cell | 1.33e-65 | 3 |
tracheal epithelial cell | 1.33e-65 | 3 |
tracheoblast | 1.33e-65 | 3 |
endo-epithelial cell | 5.35e-14 | 15 |
endodermal cell | 9.91e-11 | 20 |
epithelial cell | 9.29e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.33e-65 | 3 |
respiratory airway | 1.33e-65 | 3 |
tracheobronchial tree | 1.33e-65 | 3 |
lower respiratory tract | 1.33e-65 | 3 |
vagina | 1.39e-22 | 1 |
thoracic cavity element | 1.84e-12 | 17 |
thoracic segment organ | 1.84e-12 | 17 |
thoracic cavity | 1.84e-12 | 17 |
thoracic segment of trunk | 1.84e-12 | 17 |
respiratory primordium | 1.84e-12 | 17 |
endoderm of foregut | 1.84e-12 | 17 |
cloaca | 1.88e-08 | 3 |
anal region | 1.88e-08 | 3 |
embryonic cloaca | 1.88e-08 | 3 |
terminal part of digestive tract | 1.88e-08 | 3 |
hindgut | 1.88e-08 | 3 |
primitive urogenital sinus | 1.88e-08 | 3 |
proctodeum | 1.88e-08 | 3 |
segment of respiratory tract | 3.59e-08 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.