FFCP PHASE1:Mm9::chr1:182186425..182186436,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19165|HGNC=|UniProt=Q3U4P5,Q61144|association_with_transcript=0bp_to_ENSMUST00000111108,NM_001128605,uc007dwd.2,uc007dwe.1_5end|description=CAGE_peak_5_at_Psen2_5end|id=chr1:182186425..182186436,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,3.02e-12,8;CL:0000333,2.23e-09,10;CL:0000095,2.23e-09,10;CL:0000243,2.23e-09,10;CL:0000123,2.23e-09,10;CL:0000125,2.23e-09,10;CL:0000030,2.23e-09,10;CL:0000339,2.23e-09,10;CL:0000128,2.26e-09,6;CL:0000126,2.26e-09,6;CL:0000127,2.26e-09,6;CL:0002319,4.07e-08,43;CL:0000221,8.27e-08,44;CL:0000133,8.27e-08,44;CL:0002321,8.38e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.21e-07!73;UBERON:0005743!3.21e-07!73;UBERON:0000073!4.12e-07!75;UBERON:0001016!4.12e-07!75;UBERON:0004121!7.22e-07!102;UBERON:0000924!7.22e-07!102;UBERON:0006601!7.22e-07!102|ontology_enrichment_uberon_v019_2=|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0.0797721589953364,0,0.437102012094987,0,0.202475267389826,0.699561878128147,0.315462165358238,0.411343300817216,0.42438965179803,0.510259740906419,0.0992909512008853,0.261199789138935,0,0.68822784320151,0,0,0,0.570070258369122,0,0.665191531965914,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0.503587271902309,1.11514624341466,1.10128051297009,5.47673941043627,1.74420125104357,1.75748946187577,2.52758868796568,3.3596741190087,1.43752564364972,0,0,0,2.05807548828758,2.0057340795713,0.515672092277442,0.606949382578793,1.05798195854407,0,2.71075625655306,3.55717918444456,2.2497492932035,3.9554654502679,1.4209602298922,3.89480143673926,3.84218305321555,0.311068836925433,0.540023753326763,0,1.42825492201902,2.20868540951614,0.367472397644862,0.287536413054709,0,1.10115880999389,1.14918604276669,1.38245879930619,0.395658863190582,1.00636407962651,0,1.67509799400829,2.8138130501584,1.83357897332172,0.883885756421003,0.711858403995515,0.372798891650601,0.37863096666592,0.529000920747499,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0.704217098883403,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,0.11418387971906,0.517875767294343,1.1875371125186,1.04091196059682,1.21786191324856,0.461230994512117,0.753613202763113,0.587943535678524,0.879666139307728,0.988779870937496,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.04853447583376,0.915001205637253,0.125654352112864,0.173824320192276,1.27857728665165,0.62336413367868,1.1356888414743,0.916554274652847,0.124406970610093,0.758168275301024,0.210441855886474,0.130120442962704,0,0.360124259610698,0.30140963567143,0.680364991513279,0.768682321709099,0.655912071918102,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0.205782136407943,0.995171334092466,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,1.16765342367169,0.658239399653922,0.656669856316381,0.972825714550269,1.46199987425332,1.09775057645525,1.20785776884335,1.05144974282064,0.411618449517138,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0.658795818896044,1.00534083520108,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.569003702859245,0.342745537829186,1.1270773567308,0.407302655690628,0.775809948670503,0.49095073923223,0.505892296994058,0.590440591918409,0.627994911365499,0.493588655687202,0.592905254174298,0,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0,0.757736633841335,0,0,0.369506380333209,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.952174563544055,0.390267295715598,0.472905432318573,1.10732344824387,0.637819074629948,0.327726629431476,1.03610989119537,0.289298117163023,0,1.63171705145613,0.491764273019036,0.275936746304732,0.642202359951168,0.937693492737625,0.163934945376675,1.00988370881749,0,1.17131623288992,0.430846795465598,0.477937595905104,0.222798674082394,0.849229592366497,0.809621403349789,1.16902343164525,0.790575555893047,0.642642632843614,0.99358059645788,0.890328018336276,1.46598263418218,0.329940245945071,0,1.45668381692989,0.906970670894253,0.565815239267694,0.885905678642318,1.22974059177571,1.03371317267288,1.45413491791002,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.720244376125241,0.517434735131018,0.643011105094777,0.532020700926821,0.535106452806212,0.987294123612726,0.304464949114599,0.23467170806371,1.27099242518292,0.661585194164886,0.32977250588296,0.322928853391811,0.241251699712623,0.358117032009409,0.328281799490123,0,1.11255181206306,0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| ||
|EntrezGene=19165 | |||
|HGNC= | |||
|UniProt=Q3U4P5,Q61144 | |||
|association_with_transcript=0bp_to_ENSMUST00000111108,NM_001128605,uc007dwd.2,uc007dwe.1_5end | |||
|description=CAGE_peak_5_at_Psen2_5end | |||
|id=chr1:182186425..182186436,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.02e-12,8;CL:0000333,2.23e-09,10;CL:0000095,2.23e-09,10;CL:0000243,2.23e-09,10;CL:0000123,2.23e-09,10;CL:0000125,2.23e-09,10;CL:0000030,2.23e-09,10;CL:0000339,2.23e-09,10;CL:0000128,2.26e-09,6;CL:0000126,2.26e-09,6;CL:0000127,2.26e-09,6;CL:0002319,4.07e-08,43;CL:0000221,8.27e-08,44;CL:0000133,8.27e-08,44;CL:0002321,8.38e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.21e-07!73;UBERON:0005743!3.21e-07!73;UBERON:0000073!4.12e-07!75;UBERON:0001016!4.12e-07!75;UBERON:0004121!7.22e-07!102;UBERON:0000924!7.22e-07!102;UBERON:0006601!7.22e-07!102 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0.0797721589953364,0,0.437102012094987,0,0.202475267389826,0.699561878128147,0.315462165358238,0.411343300817216,0.42438965179803,0.510259740906419,0.0992909512008853,0.261199789138935,0,0.68822784320151,0,0,0,0.570070258369122,0,0.665191531965914,0,0,0,0.577703239502549,0,0.204169356262369,0,0,0,0.588231488031014,0.683045484958446,0.971020706062307,0.503587271902309,1.11514624341466,1.10128051297009,5.47673941043627,1.74420125104357,1.75748946187577,2.52758868796568,3.3596741190087,1.43752564364972,0,0,0,2.05807548828758,2.0057340795713,0.515672092277442,0.606949382578793,1.05798195854407,0,2.71075625655306,3.55717918444456,2.2497492932035,3.9554654502679,1.4209602298922,3.89480143673926,3.84218305321555,0.311068836925433,0.540023753326763,0,1.42825492201902,2.20868540951614,0.367472397644862,0.287536413054709,0,1.10115880999389,1.14918604276669,1.38245879930619,0.395658863190582,1.00636407962651,0,1.67509799400829,2.8138130501584,1.83357897332172,0.883885756421003,0.711858403995515,0.372798891650601,0.37863096666592,0.529000920747499,0.289864488701678,0,0.679971333707751,0,0.649776417447669,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0.704217098883403,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,0.11418387971906,0.517875767294343,1.1875371125186,1.04091196059682,1.21786191324856,0.461230994512117,0.753613202763113,0.587943535678524,0.879666139307728,0.988779870937496,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.04853447583376,0.915001205637253,0.125654352112864,0.173824320192276,1.27857728665165,0.62336413367868,1.1356888414743,0.916554274652847,0.124406970610093,0.758168275301024,0.210441855886474,0.130120442962704,0,0.360124259610698,0.30140963567143,0.680364991513279,0.768682321709099,0.655912071918102,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0.696504333044333,0.205782136407943,0.995171334092466,0.702213187313235,0.257347907114715,0,0.414251545071004,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,1.16765342367169,0.658239399653922,0.656669856316381,0.972825714550269,1.46199987425332,1.09775057645525,1.20785776884335,1.05144974282064,0.411618449517138,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0.658795818896044,1.00534083520108,0.198956472041151,0.58489226135736,0,0.216138049874694,0.199141273254367,0.569003702859245,0.342745537829186,1.1270773567308,0.407302655690628,0.775809948670503,0.49095073923223,0.505892296994058,0.590440591918409,0.627994911365499,0.493588655687202,0.592905254174298,0,0.196558995113203,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.324270453550071,0,0,0,0,0.757736633841335,0,0,0.369506380333209,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.952174563544055,0.390267295715598,0.472905432318573,1.10732344824387,0.637819074629948,0.327726629431476,1.03610989119537,0.289298117163023,0,1.63171705145613,0.491764273019036,0.275936746304732,0.642202359951168,0.937693492737625,0.163934945376675,1.00988370881749,0,1.17131623288992,0.430846795465598,0.477937595905104,0.222798674082394,0.849229592366497,0.809621403349789,1.16902343164525,0.790575555893047,0.642642632843614,0.99358059645788,0.890328018336276,1.46598263418218,0.329940245945071,0,1.45668381692989,0.906970670894253,0.565815239267694,0.885905678642318,1.22974059177571,1.03371317267288,1.45413491791002,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.720244376125241,0.517434735131018,0.643011105094777,0.532020700926821,0.535106452806212,0.987294123612726,0.304464949114599,0.23467170806371,1.27099242518292,0.661585194164886,0.32977250588296,0.322928853391811,0.241251699712623,0.358117032009409,0.328281799490123,0,1.11255181206306,0.341741761595705,0.82554747185289,0.185194527369712,0.753473828018764,0.27338845544205,0.686334519619568,0.339956859987711,0.559805809294632,0.414599921413271,0,0.158167996790568,0.203319467126849,0.540026704109006,0,0.436725127492355,0.269728692769641,0.826534557253359,1.30877970992015,0.259229946583586,0,0.56369293868419,0.448549638131936,0.330916980914195,0.583353565032143,1.03327858782185,1.520605129417,1.29092962510329,0.781226309063701,0.838874755405687,0,0.576060012515731,0.316011120628178,0.608175645870493,0,0.25984164595559,0,0.39736270956253,0,0.295379054349154,0,0.228620419965,0.100826185136841,0,0.0962118416403295,0.116876902181569,0.453460767230423,0.221985953374065,0.269141569828427,0.167884616364078,1.15913756419314,0.93841237725591,0.73260649706906,0.214368379079066,0,1.12950368523413,0.460325236507177,0,0.859265911718438,0,0,1.35004500046361,0.900642406448441,0.453142408984205,1.55328093525546,0,1.197074620203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| |||
|short_description=p5@Psen2 | |||
}} | |||
Revision as of 19:55, 13 September 2013
| Short description: | p5@Psen2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Psen2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000111108, NM_001128605, uc007dwd.2, uc007dwe.1_5end |
| EntrezGene: | Psen2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| oligodendrocyte precursor cell | 3.02e-12 | 8 |
| migratory neural crest cell | 2.23e-09 | 10 |
| neuron associated cell | 2.23e-09 | 10 |
| glial cell (sensu Vertebrata) | 2.23e-09 | 10 |
| neuron associated cell (sensu Vertebrata) | 2.23e-09 | 10 |
| glial cell | 2.23e-09 | 10 |
| glioblast | 2.23e-09 | 10 |
| glioblast (sensu Vertebrata) | 2.23e-09 | 10 |
| oligodendrocyte | 2.26e-09 | 6 |
| macroglial cell | 2.26e-09 | 6 |
| astrocyte | 2.26e-09 | 6 |
| neural cell | 4.07e-08 | 43 |
| ectodermal cell | 8.27e-08 | 44 |
| neurectodermal cell | 8.27e-08 | 44 |
| embryonic cell | 8.38e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
