FFCP PHASE1:Mm9::chr1:189516085..189516094,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=840|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:189516085..189516094,+|id=chr1:189516085..189516094,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!1.54e-10!43;UBERON:0001008!3.94e-08!17;UBERON:0006554!1.29e-07!16;UBERON:0002113!2.01e-07!14;UBERON:0003918!2.01e-07!14;UBERON:0005095!2.01e-07!14;UBERON:0007687!2.01e-07!14;UBERON:0007100!2.61e-07!18;UBERON:0000948!2.61e-07!18;UBERON:0005498!2.61e-07!18;UBERON:0004140!2.61e-07!18;UBERON:0009881!2.61e-07!18;UBERON:0004141!2.61e-07!18;UBERON:0003084!2.61e-07!18;UBERON:0007005!2.61e-07!18;UBERON:0004139!2.61e-07!18;UBERON:0004291!2.61e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0003103,7.36e-24,43;UBERON:0002113,1.33e-18,14;UBERON:0003918,1.33e-18,14;UBERON:0011143,1.33e-18,14;UBERON:0005095,1.33e-18,14;UBERON:0007687,1.33e-18,14;UBERON:0007100,5.63e-16,18;UBERON:0000948,5.63e-16,18;UBERON:0005498,5.63e-16,18;UBERON:0004140,5.63e-16,18;UBERON:0009881,5.63e-16,18;UBERON:0004141,5.63e-16,18;UBERON:0003084,5.63e-16,18;UBERON:0007005,5.63e-16,18;UBERON:0004139,5.63e-16,18;UBERON:0004291,5.63e-16,18;UBERON:0006554,5.10e-14,18;UBERON:0001008,3.56e-13,19;UBERON:0004535,5.07e-12,23;UBERON:0001009,5.07e-12,23;UBERON:0000489,9.95e-12,21;UBERON:0003914,2.91e-08,47;UBERON:0004872,1.00e-07,33|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0,0.861884930743556,0,0,0,0,0,0,1.1554064790051,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0,1.12552522006336,0.61119299110724,0,0.142371680799103,0,0,0,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.890652834388949,0.346970653532272,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0.86759614151947,0,0,0,0,0,0.292780797011547,0.628340120440365,0.766371165625774,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.101839363850316,0.248813941220186,1.26361379216837,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,1.44988040774851,0.234526059981096,0.720248245844059,0.710234206755631,1.18058539048442,1.23413690309903,1.39520366850245,3.48755421819505,2.10177616260905,0.822799249567402,2.62667942526552,1.13496333364198,1.31579988682799,2.19550115291051,1.47627060636409,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0.864552199498777,1.1948476395262,0,1.71372768914593,1.1270773567308,2.8511185898344,3.29719228184964,2.52488951605147,4.61626721007078,4.87113488332687,4.55296310739987,3.33172342588861,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.823684239564244,7.18841032636773,0.372140947668503,0.624075346229121,0.757736633841335,0.538192240565737,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.329940245945071,0,0.242780636154981,1.209294227859,0.377210159511796,0,0.614870295887855,0.258428293168221,0,1.78248689192361,0.316036757935816,0,0,1.36175842301515,0.540183282093931,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0,0,0.269728692769641,0,0.785267825952089,0.129614973291793,20.5041973318685,0,0.149516546043979,0,0,0,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0,0.857473516316263,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0,0,1.81256963593682,0,0,0.399024873401031,0,0,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.5646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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=840 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:189516085..189516094,+ | |||
|id=chr1:189516085..189516094,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.54e-10!43;UBERON:0001008!3.94e-08!17;UBERON:0006554!1.29e-07!16;UBERON:0002113!2.01e-07!14;UBERON:0003918!2.01e-07!14;UBERON:0005095!2.01e-07!14;UBERON:0007687!2.01e-07!14;UBERON:0007100!2.61e-07!18;UBERON:0000948!2.61e-07!18;UBERON:0005498!2.61e-07!18;UBERON:0004140!2.61e-07!18;UBERON:0009881!2.61e-07!18;UBERON:0004141!2.61e-07!18;UBERON:0003084!2.61e-07!18;UBERON:0007005!2.61e-07!18;UBERON:0004139!2.61e-07!18;UBERON:0004291!2.61e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,7.36e-24,43;UBERON:0002113,1.33e-18,14;UBERON:0003918,1.33e-18,14;UBERON:0011143,1.33e-18,14;UBERON:0005095,1.33e-18,14;UBERON:0007687,1.33e-18,14;UBERON:0007100,5.63e-16,18;UBERON:0000948,5.63e-16,18;UBERON:0005498,5.63e-16,18;UBERON:0004140,5.63e-16,18;UBERON:0009881,5.63e-16,18;UBERON:0004141,5.63e-16,18;UBERON:0003084,5.63e-16,18;UBERON:0007005,5.63e-16,18;UBERON:0004139,5.63e-16,18;UBERON:0004291,5.63e-16,18;UBERON:0006554,5.10e-14,18;UBERON:0001008,3.56e-13,19;UBERON:0004535,5.07e-12,23;UBERON:0001009,5.07e-12,23;UBERON:0000489,9.95e-12,21;UBERON:0003914,2.91e-08,47;UBERON:0004872,1.00e-07,33 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.47997726838022,0.22940928106717,0,0,0.861884930743556,0,0,0,0,0,0,1.1554064790051,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,1.10115880999389,0.127687338085188,0.307213066512487,0.131886287730194,0,0,0,1.12552522006336,0.61119299110724,0,0.142371680799103,0,0,0,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.890652834388949,0.346970653532272,0,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0.86759614151947,0,0,0,0,0,0.292780797011547,0.628340120440365,0.766371165625774,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0.511430914660661,0.41557608911912,0.324482526135515,0.101839363850316,0.248813941220186,1.26361379216837,0.631325567659422,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.512454881139399,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,1.44988040774851,0.234526059981096,0.720248245844059,0.710234206755631,1.18058539048442,1.23413690309903,1.39520366850245,3.48755421819505,2.10177616260905,0.822799249567402,2.62667942526552,1.13496333364198,1.31579988682799,2.19550115291051,1.47627060636409,0.210289948564127,0,0,0.528901133327089,0,0,0,0.201683524623343,0,0,0,0,0.502670417600539,0.397912944082302,0,0,0.864552199498777,1.1948476395262,0,1.71372768914593,1.1270773567308,2.8511185898344,3.29719228184964,2.52488951605147,4.61626721007078,4.87113488332687,4.55296310739987,3.33172342588861,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.823684239564244,7.18841032636773,0.372140947668503,0.624075346229121,0.757736633841335,0.538192240565737,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.329940245945071,0,0.242780636154981,1.209294227859,0.377210159511796,0,0.614870295887855,0.258428293168221,0,1.78248689192361,0.316036757935816,0,0,1.36175842301515,0.540183282093931,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0,0,0.269728692769641,0,0.785267825952089,0.129614973291793,20.5041973318685,0,0.149516546043979,0,0,0,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0,0.857473516316263,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0,0,0,0,1.81256963593682,0,0,0.399024873401031,0,0,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.192075457214608,0.229741875822453,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.564656282491984,0.338458431566706,0.548783918618318,0,0.407412341537585,0,0.593175090620871,0.0985044823755635,0.409231043169689,0.77468420592983,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr1:189516085..189516094,+ | |||
}} |
Revision as of 20:02, 13 September 2013
Short description: | p@chr1:189516085..189516094, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:189516085..189516094, + |
Coexpression cluster: | MCL_coexpression_mm9:840 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
compound organ | 7.36e-24 | 43 |
kidney | 1.33e-18 | 14 |
kidney mesenchyme | 1.33e-18 | 14 |
upper urinary tract | 1.33e-18 | 14 |
kidney rudiment | 1.33e-18 | 14 |
kidney field | 1.33e-18 | 14 |
primary circulatory organ | 5.63e-16 | 18 |
heart | 5.63e-16 | 18 |
primitive heart tube | 5.63e-16 | 18 |
primary heart field | 5.63e-16 | 18 |
anterior lateral plate mesoderm | 5.63e-16 | 18 |
heart tube | 5.63e-16 | 18 |
heart primordium | 5.63e-16 | 18 |
cardiac mesoderm | 5.63e-16 | 18 |
cardiogenic plate | 5.63e-16 | 18 |
heart rudiment | 5.63e-16 | 18 |
urinary system structure | 5.10e-14 | 18 |
renal system | 3.56e-13 | 19 |
cardiovascular system | 5.07e-12 | 23 |
circulatory system | 5.07e-12 | 23 |
cavitated compound organ | 9.95e-12 | 21 |
epithelial tube | 2.91e-08 | 47 |
splanchnic layer of lateral plate mesoderm | 1.00e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.