FFCP PHASE1:Hg19::chr6:42531912..42531927,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23304|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21289|TSSclassifier=S|UniProt=Q8IWV8|association_with_transcript=112bp_to_ENST00000372899,ENST00000372901,ENST00000372903_5end|description=CAGE_peak_4_at_UBR2_5end|id=chr6:42531912..42531927,+|ontology_enrichment_celltype=CL:0000791!9.00e-08!18;CL:0000789!9.00e-08!18;CL:0002420!9.00e-08!18;CL:0002419!9.00e-08!18;CL:0000790!9.00e-08!18;CL:0000037!2.73e-07!172;CL:0000566!2.73e-07!172;CL:0000625!9.28e-07!11|ontology_enrichment_celltype_v019=CL:0000791;1.28e-07;18!CL:0000789;1.28e-07;18!CL:0002419;1.28e-07;18|ontology_enrichment_celltype_v019_2=CL:0000791,2.70e-08,18;CL:0000789,2.70e-08,18;CL:0002420,2.70e-08,18;CL:0002419,2.70e-08,18;CL:0000790,2.70e-08,18;CL:0000625,3.34e-07,11;CL:0000037,6.41e-07,168;CL:0000084,7.66e-07,25;CL:0000827,7.66e-07,25;CL:0000988,9.11e-07,177|ontology_enrichment_development_v019=CL:0000790;1.28e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.40e-09!115;UBERON:0000178!4.44e-07!15;UBERON:0000179!4.44e-07!15;UBERON:0000463!4.44e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.97e-08;15!UBERON:0000179;3.97e-08;15!UBERON:0000463;3.97e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.95e-08,114;UBERON:0000178,6.54e-08,15;UBERON:0000179,6.54e-08,15;UBERON:0000463,6.54e-08,15|phase1_expression=1.63510541343501,0.214100523890983,1.55049844505568,4.00293193412522,0.446961094427288,2.61701557230111,0,0.631719873426831,0.522371256399677,0,0,0.436882744260345,1.05506791291381,2.47532705920093,0.994192127183747,4.03395087871065,1.20538905604795,0,1.46379839637152,0.738726348460727,0.204000691244253,0,0.286235987131057,0.821246550437305,0.87879847716362,0.458480434487708,1.23150884174919,1.25937250101887,0.393364276848904,2.30297638858328,0.928896739896456,0,0,1.10926203050036,0.542270404062111,0.710846162437108,1.17440175733939,0.553995408531877,1.20326668482085,1.30206522429511,0.671746422719773,0.971680998056939,0.77272670290256,2.18097358169347,1.88937971844405,1.69808842831471,1.16214518452842,0.822335776043652,1.23882548358041,0.28769239232215,0.768482119587302,0.945928919554341,1.03423704220986,0.645484683583826,2.70852973188684,0.564727018627814,1.36453075028923,1.34834090667051,2.14258724659632,0,2.55734850319616,1.31940520074686,0.797854630486527,1.27867425159808,0.290209238628584,0.56738522469114,1.24564449799115,1.00499466102697,0,1.52032191293582,0,0.736555271975129,0.316462387440884,0.211255286311942,1.06302149982522,1.25795187305026,1.46027220490444,2.55300717830561,1.76798145366788,1.71007646244749,1.39241674039363,1.64397738388171,0,2.18455444504853,3.55803701545422,1.28019066769952,2.40237592221607,1.72425731986345,0.661044872784862,1.90810750907073,0.569212969109448,1.76171156811282,2.29363936875137,1.32171328579026,5.04457706683382,1.84368859342554,2.16380747125216,3.93010762749165,2.05601498999509,2.17342444007882,1.62961133316795,1.4203434172042,5.84480185223734,2.33961959458865,2.94605907474837,2.21533894583621,2.43723477388514,1.5370958367081,2.47112760363769,0.822189523018381,2.48715016007264,2.60822777161547,2.96573126324121,3.47803076516627,4.18142095219907,2.26618685395132,2.68254345521345,2.40539211837841,3.03623630423403,3.82278497188916,3.90650072313851,1.90090408889675,3.61380285786655,3.07167866770604,6.24653632761729,3.55165878066025,4.92676798152628,1.81446068902259,3.7441627409691,2.75166367377318,2.43806866313962,0.670700859703636,1.02290049474824,1.44575660953827,1.50401373190767,0.434539556882471,0,1.45990461090791,1.13441780596881,1.99556457716308,0.966182642624386,1.44076983047484,0,0,0.97364218096405,1.21890816109487,0.797747763113191,5.00830311041218,13.1558829479429,8.91498003190956,0.596287222100115,1.72046919021225,1.04142150482278,0.56530794192401,0.838998872419812,0.275118041940067,0.208994966536811,1.29208379584664,1.06729878806013,1.00416183829401,0,0.760272105718513,0.24406205754817,0,0,1.87529429396568,2.91888184414021,1.57656072676651,0,0,0.366403487860815,10.5424333948851,7.75560528296651,0.436094052142534,1.98788780678127,1.01304409331664,3.57504788195691,2.86836620748814,1.06400514659507,2.24271040056923,0,0.74000264525148,3.11211035399766,1.48181739276657,1.63461903113459,0.756787138224657,1.15235184896,0,2.18512053781224,0.570471821544449,1.34503812496621,1.996386476944,2.5899671098901,0.842704840213491,2.24569588380383,0.737005903870608,1.03325781175765,0,0.741800787835671,0,0,2.02003336744879,1.62654075833553,1.10825646193673,2.63386572528503,1.5324389789951,2.10333282469236,0.567160915800105,2.15267562826634,0.640672166455702,1.69545520927649,3.00091096084402,2.26715564324566,3.86460810068444,1.67505170698431,2.70042131586026,1.07180705677318,2.52433774244115,1.38074847963449,0.80823028409406,2.4850671476163,0.806016785821122,0.847802961552438,1.35282597214308,0.545492241181669,0.573609190778008,0.48789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78,2.48750831837634,1.34462894620464,0.639701945702943,2.3806443146374,4.00451240983238,2.48298857183432,1.23345048838675,0.763765899337979,0.808468755832877,0.870866991587845,0.684466602170562,1.14498490124799,1.79305513481691,0.99798106963804,0.814032686109745,1.60091018816573,5.7921684686082,0.808426818959282,0,3.66724332548599,1.62758471326295,3.99454064511308,1.40891655513718,0.641136984606466|short_description=p4@UBR2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23304 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21289 | |||
|TSSclassifier=S | |||
|UniProt=Q8IWV8 | |||
|association_with_transcript=112bp_to_ENST00000372899,ENST00000372901,ENST00000372903_5end | |||
|description=CAGE_peak_4_at_UBR2_5end | |||
|id=chr6:42531912..42531927,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.00e-08!18;CL:0000789!9.00e-08!18;CL:0002420!9.00e-08!18;CL:0002419!9.00e-08!18;CL:0000790!9.00e-08!18;CL:0000037!2.73e-07!172;CL:0000566!2.73e-07!172;CL:0000625!9.28e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.28e-07;18!CL:0000789;1.28e-07;18!CL:0002419;1.28e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.70e-08,18;CL:0000789,2.70e-08,18;CL:0002420,2.70e-08,18;CL:0002419,2.70e-08,18;CL:0000790,2.70e-08,18;CL:0000625,3.34e-07,11;CL:0000037,6.41e-07,168;CL:0000084,7.66e-07,25;CL:0000827,7.66e-07,25;CL:0000988,9.11e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.28e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.40e-09!115;UBERON:0000178!4.44e-07!15;UBERON:0000179!4.44e-07!15;UBERON:0000463!4.44e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.97e-08;15!UBERON:0000179;3.97e-08;15!UBERON:0000463;3.97e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.95e-08,114;UBERON:0000178,6.54e-08,15;UBERON:0000179,6.54e-08,15;UBERON:0000463,6.54e-08,15 | |||
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| |||
|short_description=p4@UBR2 | |||
}} |
Revision as of 21:02, 13 September 2013
Short description: | p4@UBR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_UBR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 112bp_to_ENST00000372899, ENST00000372901, ENST00000372903_5end |
EntrezGene: | UBR2 |
HGNC: | 21289 |
UniProt: | Q8IWV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.70e-08 | 18 |
alpha-beta T cell | 2.70e-08 | 18 |
immature T cell | 2.70e-08 | 18 |
mature T cell | 2.70e-08 | 18 |
immature alpha-beta T cell | 2.70e-08 | 18 |
CD8-positive, alpha-beta T cell | 3.34e-07 | 11 |
hematopoietic stem cell | 6.41e-07 | 168 |
T cell | 7.66e-07 | 25 |
pro-T cell | 7.66e-07 | 25 |
hematopoietic cell | 9.11e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.95e-08 | 114 |
blood | 6.54e-08 | 15 |
haemolymphatic fluid | 6.54e-08 | 15 |
organism substance | 6.54e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.