FFCP PHASE1:Mm9::chr2:165112043..165112060,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=228875|HGNC=|MCL_coexpression_id=3|UniProt=Q5GMG7|association_with_transcript=0bp_to_ENSMUST00000129210_5end|description=CAGE_peak_5_at_Slc35c2_5end|id=chr2:165112043..165112060,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,8.34e-16,19;CL:0000988,6.22e-14,32;CL:0002032,6.22e-14,32;CL:0000037,6.22e-14,32;CL:0000837,6.22e-14,32;CL:0000553,6.12e-11,6;CL:0000556,6.12e-11,6;CL:0000763,6.27e-10,16;CL:0002320,8.53e-09,46;CL:0000134,8.53e-09,46;CL:0002027,2.29e-08,3;CL:0002006,2.29e-08,3;CL:0002024,2.29e-08,3;CL:0000050,3.37e-07,9;CL:0000219,4.54e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-10,3;DOID:4045,6.21e-10,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.68e-10,32;UBERON:0002371,6.27e-10,16;UBERON:0002384,8.53e-09,46;UBERON:0001474,8.73e-09,22;UBERON:0004765,8.73e-09,22;UBERON:0001434,8.73e-09,22|phase1_expression=0,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,1.33243904726265,1.01237633694913,2.09868563438444,1.73504190947031,1.91960207048034,0.42438965179803,0.0850432901510698,1.09220046320974,1.82839852397255,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,10.1573594788094,8.89990364755457,19.4116391050235,10.9287277593351,11.6522484727477,0,0,0,0,0,0,0,0,0,1.17447824240415,0.725362142011344,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.148442139064825,0,0,0,0,0.23517741427141,0,0,0,2.65383165584962,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,2.75574786363617,2.39961092397363,2.41433431438823,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,3.51106593656617,2.57347907114715,3.9782889915383,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,0,0,2.64335026387038,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.823494773620054,0.754005626400808,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0,0.449724224769707,0.811440485554012,0.964708639009667,0.50925170356284,0.863088412352432,0.810676133875177,1.64736847912849,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,1.29327233116623,0,0,0,0,0,0.238043640886014,0.975668239288994,0.630540576424764,0.664394068946325,0.478364305972461,0.983179888294428,0.690739927463582,0.289298117163023,0,0,2.45882136509518,1.65562047782839,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0,0.16488625294148,0,0,0,0,1.1659233465194,0,1.70870880797853,0.206386867963223,0.925972636848558,1.13021074202815,1.23024804948923,0.915112692826091,0.339956859987711,1.25956307091292,0.690999869022119,0,0.316335993581135,0,0.108005340821801,0,0,0,0.247960367176008,0,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0.295379054349154,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p5@Slc35c2}} | ||
|EntrezGene=228875 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q5GMG7 | |||
|association_with_transcript=0bp_to_ENSMUST00000129210_5end | |||
|description=CAGE_peak_5_at_Slc35c2_5end | |||
|id=chr2:165112043..165112060,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,8.34e-16,19;CL:0000988,6.22e-14,32;CL:0002032,6.22e-14,32;CL:0000037,6.22e-14,32;CL:0000837,6.22e-14,32;CL:0000553,6.12e-11,6;CL:0000556,6.12e-11,6;CL:0000763,6.27e-10,16;CL:0002320,8.53e-09,46;CL:0000134,8.53e-09,46;CL:0002027,2.29e-08,3;CL:0002006,2.29e-08,3;CL:0002024,2.29e-08,3;CL:0000050,3.37e-07,9;CL:0000219,4.54e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-10,3;DOID:4045,6.21e-10,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.68e-10,32;UBERON:0002371,6.27e-10,16;UBERON:0002384,8.53e-09,46;UBERON:0001474,8.73e-09,22;UBERON:0004765,8.73e-09,22;UBERON:0001434,8.73e-09,22 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,1.33243904726265,1.01237633694913,2.09868563438444,1.73504190947031,1.91960207048034,0.42438965179803,0.0850432901510698,1.09220046320974,1.82839852397255,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,10.1573594788094,8.89990364755457,19.4116391050235,10.9287277593351,11.6522484727477,0,0,0,0,0,0,0,0,0,1.17447824240415,0.725362142011344,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.148442139064825,0,0,0,0,0.23517741427141,0,0,0,2.65383165584962,0.161766849947409,0.662524555381181,0.484875253135222,0,0,0,0,2.75574786363617,2.39961092397363,2.41433431438823,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,3.51106593656617,2.57347907114715,3.9782889915383,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0.219550115291051,0,0,0,2.64335026387038,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.823494773620054,0.754005626400808,0.596869416123452,0.974820435595601,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0.166845105716094,0,0.449724224769707,0.811440485554012,0.964708639009667,0.50925170356284,0.863088412352432,0.810676133875177,1.64736847912849,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,1.29327233116623,0,0,0,0,0,0.238043640886014,0.975668239288994,0.630540576424764,0.664394068946325,0.478364305972461,0.983179888294428,0.690739927463582,0.289298117163023,0,0,2.45882136509518,1.65562047782839,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0,0,0,0.177340233642274,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0,0.16488625294148,0,0,0,0,1.1659233465194,0,1.70870880797853,0.206386867963223,0.925972636848558,1.13021074202815,1.23024804948923,0.915112692826091,0.339956859987711,1.25956307091292,0.690999869022119,0,0.316335993581135,0,0.108005340821801,0,0,0,0.247960367176008,0,0,1.24267862617385,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0.295379054349154,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p5@Slc35c2 | |||
}} |
Revision as of 22:56, 13 September 2013
Short description: | p5@Slc35c2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc35c2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000129210_5end |
EntrezGene: | Slc35c2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 8.34e-16 | 19 |
hematopoietic cell | 6.22e-14 | 32 |
hematopoietic oligopotent progenitor cell | 6.22e-14 | 32 |
hematopoietic stem cell | 6.22e-14 | 32 |
hematopoietic multipotent progenitor cell | 6.22e-14 | 32 |
megakaryocyte progenitor cell | 6.12e-11 | 6 |
megakaryocyte | 6.12e-11 | 6 |
myeloid cell | 6.27e-10 | 16 |
connective tissue cell | 8.53e-09 | 46 |
mesenchymal cell | 8.53e-09 | 46 |
CD9-positive, CD41-positive megakaryocyte cell | 2.29e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.29e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.29e-08 | 3 |
megakaryocyte-erythroid progenitor cell | 3.37e-07 | 9 |
motile cell | 4.54e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.68e-10 | 32 |
bone marrow | 6.27e-10 | 16 |
connective tissue | 8.53e-09 | 46 |
bone element | 8.73e-09 | 22 |
skeletal element | 8.73e-09 | 22 |
skeletal system | 8.73e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.21e-10 | 3 |
muscle cancer | 6.21e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.