FFCP PHASE1:Hg19::chr7:137139601..137139626,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9162|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2855|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000477835_5end|coexpression_cluster_id=C4656|description=CAGE_peak_6_at_DGKI_5end|id=chr7:137139601..137139626,-|ontology_enrichment_celltype=CL:0000057!2.99e-10!75;CL:0000055!1.83e-09!180;CL:0002334!3.82e-07!12|ontology_enrichment_celltype_v019=CL:0002549;3.10e-17;2!CL:0002579;5.27e-12;3!CL:0000134;1.07e-10;55!CL:0000048;1.71e-09;58!CL:0002537;7.09e-08;5!CL:0002552;1.30e-07;5!CL:0000723;2.32e-07;61!CL:0000034;3.56e-07;69|ontology_enrichment_celltype_v019_2=CL:0002549,2.41e-17,2;CL:0002579,6.59e-12,3;CL:0002537,7.46e-08,5;CL:0002552,1.08e-07,5|ontology_enrichment_development_v019=UBERON:0004140;4.66e-10;1!UBERON:0010227;8.90e-10;1|ontology_enrichment_disease=DOID:2394!7.47e-11!14|ontology_enrichment_disease_v019=DOID:2394;1.14e-09;14|ontology_enrichment_disease_v019_2=DOID:2394,1.14e-09,14|ontology_enrichment_uberon=UBERON:0000948!1.83e-07!24;UBERON:0005498!1.83e-07!24;UBERON:0004140!1.83e-07!24;UBERON:0009881!1.83e-07!24;UBERON:0004141!1.83e-07!24;UBERON:0003084!1.83e-07!24;UBERON:0007005!1.83e-07!24;UBERON:0004139!1.83e-07!24;UBERON:0004291!1.83e-07!24|ontology_enrichment_uberon_v019=UBERON:0005629;3.10e-17;2!UBERON:0005358;3.10e-17;2!UBERON:0001886;3.10e-17;2!UBERON:0004086;3.10e-17;2!UBERON:0005282;3.10e-17;2!UBERON:0005281;3.10e-17;2!UBERON:0002079;8.90e-10;1!UBERON:0002118;1.15e-07;5!UBERON:0005284;1.96e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.41e-17,2;UBERON:0005358,2.41e-17,2;UBERON:0001886,2.41e-17,2;UBERON:0004086,2.41e-17,2;UBERON:0005282,2.41e-17,2;UBERON:0005281,2.41e-17,2;UBERON:0002079,7.50e-10,1;UBERON:0002118,1.15e-07,5;UBERON:0005284,1.77e-07,5|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.794455084879313,0,0,0,0,0,0.622422070799533,0.134710672069688,0,1.51357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0.206651562351531,3.56400857184616,1.97813543422845,0,0,0,0,0,0,0,0.901428353439581,0.226864366320042,0,0,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0,0.184099797284599,0,0,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,1.14596527667483,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,15.9562869950922,3.12022310734098,0,0,0,1.00084595560703,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,1.02511319404561,2.55853624533352,0.160853921143607,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.574072240823034,0.364182336013434,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0,0.471249609382746,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,3.75635766871975,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,5.50904474391155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.157363764404994,0,0,0,2.85878130549347,0,0,0,0.864221491201268,1.95952416065645,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,10.4637891103737,0.285465333544967,0,0,0,0,0.467426619694449,1.10961172300523,0.189403005275089,3.27038272278348,0,0.457680136793847,2.11723293268535,0,0,0.796483835818512,1.79921244865442,0.465788870628778,0,0.265841714557995,1.04349012362347,0.150257608997218,0.380805212168795,0,2.54588122883583,0,2.78420255927096,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0.431299245586727,0,0.655257829152084,0,0,0.371807292777007,0,0,0,0,0.352675943690684,0.6124909547064,0.0642292250964595,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,5.8281310465261,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0|short_description=p6@DGKI}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9162 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2855 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000477835_5end | |||
|coexpression_cluster_id=C4656 | |||
|description=CAGE_peak_6_at_DGKI_5end | |||
|id=chr7:137139601..137139626,- | |||
|ontology_enrichment_celltype=CL:0000057!2.99e-10!75;CL:0000055!1.83e-09!180;CL:0002334!3.82e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002549;3.10e-17;2!CL:0002579;5.27e-12;3!CL:0000134;1.07e-10;55!CL:0000048;1.71e-09;58!CL:0002537;7.09e-08;5!CL:0002552;1.30e-07;5!CL:0000723;2.32e-07;61!CL:0000034;3.56e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,2.41e-17,2;CL:0002579,6.59e-12,3;CL:0002537,7.46e-08,5;CL:0002552,1.08e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.66e-10;1!UBERON:0010227;8.90e-10;1 | |||
|ontology_enrichment_disease=DOID:2394!7.47e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.14e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.14e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000948!1.83e-07!24;UBERON:0005498!1.83e-07!24;UBERON:0004140!1.83e-07!24;UBERON:0009881!1.83e-07!24;UBERON:0004141!1.83e-07!24;UBERON:0003084!1.83e-07!24;UBERON:0007005!1.83e-07!24;UBERON:0004139!1.83e-07!24;UBERON:0004291!1.83e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.10e-17;2!UBERON:0005358;3.10e-17;2!UBERON:0001886;3.10e-17;2!UBERON:0004086;3.10e-17;2!UBERON:0005282;3.10e-17;2!UBERON:0005281;3.10e-17;2!UBERON:0002079;8.90e-10;1!UBERON:0002118;1.15e-07;5!UBERON:0005284;1.96e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.41e-17,2;UBERON:0005358,2.41e-17,2;UBERON:0001886,2.41e-17,2;UBERON:0004086,2.41e-17,2;UBERON:0005282,2.41e-17,2;UBERON:0005281,2.41e-17,2;UBERON:0002079,7.50e-10,1;UBERON:0002118,1.15e-07,5;UBERON:0005284,1.77e-07,5 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.794455084879313,0,0,0,0,0,0.622422070799533,0.134710672069688,0,1.51357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0.206651562351531,3.56400857184616,1.97813543422845,0,0,0,0,0,0,0,0.901428353439581,0.226864366320042,0,0,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.292311015483596,0,0.184099797284599,0,0,0.806016785821122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,1.14596527667483,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,15.9562869950922,3.12022310734098,0,0,0,1.00084595560703,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,1.02511319404561,2.55853624533352,0.160853921143607,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.574072240823034,0.364182336013434,1.04899531967539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0,0.471249609382746,0,0,0.421258456238981,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,3.75635766871975,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,5.50904474391155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.157363764404994,0,0,0,2.85878130549347,0,0,0,0.864221491201268,1.95952416065645,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,10.4637891103737,0.285465333544967,0,0,0,0,0.467426619694449,1.10961172300523,0.189403005275089,3.27038272278348,0,0.457680136793847,2.11723293268535,0,0,0.796483835818512,1.79921244865442,0.465788870628778,0,0.265841714557995,1.04349012362347,0.150257608997218,0.380805212168795,0,2.54588122883583,0,2.78420255927096,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0.431299245586727,0,0.655257829152084,0,0,0.371807292777007,0,0,0,0,0.352675943690684,0.6124909547064,0.0642292250964595,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,5.8281310465261,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p6@DGKI | |||
}} |
Revision as of 23:26, 13 September 2013
Short description: | p6@DGKI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_DGKI_5end |
Coexpression cluster: | C4656_Mesenchymal_melanoma_heart_teratocarcinoma_Fibroblast_mesenchymal_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000477835_5end |
EntrezGene: | DGKI |
HGNC: | 2855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 2.41e-17 | 2 |
omentum preadipocyte | 6.59e-12 | 3 |
amnion mesenchymal stem cell | 7.46e-08 | 5 |
fibroblast of gingiva | 1.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.41e-17 | 2 |
ventricle of nervous system | 2.41e-17 | 2 |
choroid plexus | 2.41e-17 | 2 |
brain ventricle | 2.41e-17 | 2 |
ventricular system of brain | 2.41e-17 | 2 |
ventricular system of central nervous system | 2.41e-17 | 2 |
left cardiac atrium | 7.50e-10 | 1 |
right ovary | 1.15e-07 | 5 |
brain vasculature | 1.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.14e-09 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.