FFCP PHASE1:Hg19::chr8:1806935..1806947,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9639|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14103|TSSclassifier=S|UniProt=|association_with_transcript=14bp_to_ENST00000382795,uc003wpt.2_5end|coexpression_cluster_id=C98|description=CAGE_peak_3_at_ARHGEF10_5end|id=chr8:1806935..1806947,+|ontology_enrichment_celltype=CL:0000625!3.13e-37!11;CL:0000791!6.67e-28!18;CL:0000789!6.67e-28!18;CL:0002420!6.67e-28!18;CL:0002419!6.67e-28!18;CL:0000790!6.67e-28!18;CL:0000084!1.12e-19!25;CL:0000827!1.12e-19!25;CL:0000838!1.10e-08!52;CL:0000542!1.71e-08!53;CL:0000051!1.71e-08!53;CL:0002553!1.22e-07!1|ontology_enrichment_celltype_v019=CL:0000625;4.31e-72;11!CL:0000791;7.58e-44;18!CL:0000789;7.58e-44;18!CL:0002419;7.58e-44;18!CL:0000084;2.14e-31;25!CL:0000542;6.52e-08;53|ontology_enrichment_celltype_v019_2=CL:0000625,4.51e-72,11;CL:0000791,7.80e-44,18;CL:0000789,7.80e-44,18;CL:0002420,7.80e-44,18;CL:0002419,7.80e-44,18;CL:0000790,7.80e-44,18;CL:0000084,2.18e-31,25;CL:0000827,2.18e-31,25;CL:0000838,1.03e-14,52;CL:0000542,2.03e-14,53;CL:0000051,2.03e-14,53|ontology_enrichment_development_v019=CL:0000790;7.58e-44;18!CL:0000051;6.52e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!4.78e-33!15;UBERON:0000179!4.78e-33!15;UBERON:0000463!4.78e-33!15;UBERON:0000996!1.30e-07!1|ontology_enrichment_uberon_v019=UBERON:0000178;2.64e-51;15!UBERON:0000179;2.64e-51;15!UBERON:0000463;2.64e-51;15!UBERON:0002390;2.09e-22;32!UBERON:0002193;6.40e-13;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.55e-51,15;UBERON:0000179,2.55e-51,15;UBERON:0000463,2.55e-51,15;UBERON:0002390,3.92e-07,98;UBERON:0003061,3.92e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5126586726952,18.8814201618361,12.3558765778289,14.3046363123884,16.3822862277656,12.4930726552346,10.4181990899367,3.28451198768419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.10426652925037,7.64637207142375,6.26611905891579,6.67048971281809,8.63860773481008,3.8908398671563,4.86028293514303,7.9312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0|short_description=p3@ARHGEF10}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9639 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14103 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000382795,uc003wpt.2_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_3_at_ARHGEF10_5end | |||
|id=chr8:1806935..1806947,+ | |||
|ontology_enrichment_celltype=CL:0000625!3.13e-37!11;CL:0000791!6.67e-28!18;CL:0000789!6.67e-28!18;CL:0002420!6.67e-28!18;CL:0002419!6.67e-28!18;CL:0000790!6.67e-28!18;CL:0000084!1.12e-19!25;CL:0000827!1.12e-19!25;CL:0000838!1.10e-08!52;CL:0000542!1.71e-08!53;CL:0000051!1.71e-08!53;CL:0002553!1.22e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.31e-72;11!CL:0000791;7.58e-44;18!CL:0000789;7.58e-44;18!CL:0002419;7.58e-44;18!CL:0000084;2.14e-31;25!CL:0000542;6.52e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.51e-72,11;CL:0000791,7.80e-44,18;CL:0000789,7.80e-44,18;CL:0002420,7.80e-44,18;CL:0002419,7.80e-44,18;CL:0000790,7.80e-44,18;CL:0000084,2.18e-31,25;CL:0000827,2.18e-31,25;CL:0000838,1.03e-14,52;CL:0000542,2.03e-14,53;CL:0000051,2.03e-14,53 | |||
|ontology_enrichment_development_v019=CL:0000790;7.58e-44;18!CL:0000051;6.52e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.78e-33!15;UBERON:0000179!4.78e-33!15;UBERON:0000463!4.78e-33!15;UBERON:0000996!1.30e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.64e-51;15!UBERON:0000179;2.64e-51;15!UBERON:0000463;2.64e-51;15!UBERON:0002390;2.09e-22;32!UBERON:0002193;6.40e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.55e-51,15;UBERON:0000179,2.55e-51,15;UBERON:0000463,2.55e-51,15;UBERON:0002390,3.92e-07,98;UBERON:0003061,3.92e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5126586726952,18.8814201618361,12.3558765778289,14.3046363123884,16.3822862277656,12.4930726552346,10.4181990899367,3.28451198768419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.10426652925037,7.64637207142375,6.26611905891579,6.67048971281809,8.63860773481008,3.8908398671563,4.86028293514303,7.9312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.452888530700021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p3@ARHGEF10 | |||
}} |
Revision as of 04:24, 14 September 2013
Short description: | p3@ARHGEF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ARHGEF10_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 14bp_to_ENST00000382795, uc003wpt.2_5end |
EntrezGene: | ARHGEF10 |
HGNC: | 14103 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.51e-72 | 11 |
mature alpha-beta T cell | 7.80e-44 | 18 |
alpha-beta T cell | 7.80e-44 | 18 |
immature T cell | 7.80e-44 | 18 |
mature T cell | 7.80e-44 | 18 |
immature alpha-beta T cell | 7.80e-44 | 18 |
T cell | 2.18e-31 | 25 |
pro-T cell | 2.18e-31 | 25 |
lymphoid lineage restricted progenitor cell | 1.03e-14 | 52 |
lymphocyte | 2.03e-14 | 53 |
common lymphoid progenitor | 2.03e-14 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 2.55e-51 | 15 |
haemolymphatic fluid | 2.55e-51 | 15 |
organism substance | 2.55e-51 | 15 |
hematopoietic system | 3.92e-07 | 98 |
blood island | 3.92e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.