FFCP PHASE1:Mm9::chr4:151792859..151792870,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16498|HGNC=|MCL_coexpression_id=16|UniProt=|association_with_transcript=-343bp_to_ENSMUST00000161844_5end|description=CAGE_peak_12_at_Kcnab2_5end|id=chr4:151792859..151792870,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000217,4.13e-10,2;CL:0000328,4.13e-10,2;CL:0002573,4.13e-10,2;CL:0002376,4.13e-10,2;CL:0000218,4.13e-10,2;CL:0000692,4.13e-10,2;CL:0002377,4.13e-10,2;CL:0002375,4.13e-10,2;CL:0000215,3.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!2.11e-12!9;UBERON:0000019!2.11e-12!9;UBERON:0000047!2.11e-12!9;UBERON:0004088!2.11e-12!9;UBERON:0002104!2.11e-12!9;UBERON:0001456!2.11e-12!9;UBERON:0003072!2.11e-12!9;UBERON:0003071!2.11e-12!9;UBERON:0004128!2.11e-12!9;UBERON:0001444!6.30e-10!11;UBERON:0000010!1.37e-09!11;UBERON:0000020!5.33e-09!12;UBERON:0001032!5.33e-09!12;UBERON:0004456!5.33e-09!12;UBERON:0005085!3.24e-08!13;UBERON:0002346!4.36e-08!71;UBERON:0003075!4.36e-08!71;UBERON:0007284!4.36e-08!71;UBERON:0004121!4.38e-08!102;UBERON:0000924!4.38e-08!102;UBERON:0006601!4.38e-08!102;UBERON:0002005!2.02e-07!3;UBERON:0005428!2.02e-07!3;UBERON:0002342!3.96e-07!10;UBERON:0005062!3.96e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.27e-31,9;UBERON:0000019,2.27e-31,9;UBERON:0000047,2.27e-31,9;UBERON:0010312,2.27e-31,9;UBERON:0004088,2.27e-31,9;UBERON:0002104,2.27e-31,9;UBERON:0001456,2.27e-31,9;UBERON:0003072,2.27e-31,9;UBERON:0004128,2.27e-31,9;UBERON:0003071,2.27e-31,9;UBERON:0001444,7.89e-26,11;UBERON:0000020,9.49e-24,12;UBERON:0001032,9.49e-24,12;UBERON:0004456,9.49e-24,12;UBERON:0000033,5.48e-22,13;UBERON:0005085,5.48e-22,13;UBERON:0007811,2.19e-08,36;UBERON:0000153,4.09e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0,0.302904773332736,1.36028808192214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0,0,0,0,0,1.26265113531884,0,0,0.180062129805349,0.30140963567143,1.02054748726992,0.640568601424249,1.21812241927647,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,0,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p12@Kcnab2}} | ||
|EntrezGene=16498 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|UniProt= | |||
|association_with_transcript=-343bp_to_ENSMUST00000161844_5end | |||
|description=CAGE_peak_12_at_Kcnab2_5end | |||
|id=chr4:151792859..151792870,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,4.13e-10,2;CL:0000328,4.13e-10,2;CL:0002573,4.13e-10,2;CL:0002376,4.13e-10,2;CL:0000218,4.13e-10,2;CL:0000692,4.13e-10,2;CL:0002377,4.13e-10,2;CL:0002375,4.13e-10,2;CL:0000215,3.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.11e-12!9;UBERON:0000019!2.11e-12!9;UBERON:0000047!2.11e-12!9;UBERON:0004088!2.11e-12!9;UBERON:0002104!2.11e-12!9;UBERON:0001456!2.11e-12!9;UBERON:0003072!2.11e-12!9;UBERON:0003071!2.11e-12!9;UBERON:0004128!2.11e-12!9;UBERON:0001444!6.30e-10!11;UBERON:0000010!1.37e-09!11;UBERON:0000020!5.33e-09!12;UBERON:0001032!5.33e-09!12;UBERON:0004456!5.33e-09!12;UBERON:0005085!3.24e-08!13;UBERON:0002346!4.36e-08!71;UBERON:0003075!4.36e-08!71;UBERON:0007284!4.36e-08!71;UBERON:0004121!4.38e-08!102;UBERON:0000924!4.38e-08!102;UBERON:0006601!4.38e-08!102;UBERON:0002005!2.02e-07!3;UBERON:0005428!2.02e-07!3;UBERON:0002342!3.96e-07!10;UBERON:0005062!3.96e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.27e-31,9;UBERON:0000019,2.27e-31,9;UBERON:0000047,2.27e-31,9;UBERON:0010312,2.27e-31,9;UBERON:0004088,2.27e-31,9;UBERON:0002104,2.27e-31,9;UBERON:0001456,2.27e-31,9;UBERON:0003072,2.27e-31,9;UBERON:0004128,2.27e-31,9;UBERON:0003071,2.27e-31,9;UBERON:0001444,7.89e-26,11;UBERON:0000020,9.49e-24,12;UBERON:0001032,9.49e-24,12;UBERON:0004456,9.49e-24,12;UBERON:0000033,5.48e-22,13;UBERON:0005085,5.48e-22,13;UBERON:0007811,2.19e-08,36;UBERON:0000153,4.09e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0,0,0.302904773332736,1.36028808192214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0.301445281105245,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0,0,0,0,0,1.26265113531884,0,0,0.180062129805349,0.30140963567143,1.02054748726992,0.640568601424249,1.21812241927647,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0.315508219416257,0.390438744296638,0.430846795465598,0,0,0,0,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.523511883968059,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p12@Kcnab2 | |||
}} |
Revision as of 04:36, 14 September 2013
Short description: | p12@Kcnab2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Kcnab2_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -343bp_to_ENSMUST00000161844_5end |
EntrezGene: | Kcnab2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 4.13e-10 | 2 |
myelin accumulating cell | 4.13e-10 | 2 |
Schwann cell | 4.13e-10 | 2 |
non-myelinating Schwann cell | 4.13e-10 | 2 |
myelinating Schwann cell;;Schwann cell | 4.13e-10 | 2 |
terminal Schwann cell | 4.13e-10 | 2 |
immature Schwann cell | 4.13e-10 | 2 |
Schwann cell precursor | 4.13e-10 | 2 |
barrier cell | 3.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 2.27e-31 | 9 |
camera-type eye | 2.27e-31 | 9 |
simple eye | 2.27e-31 | 9 |
immature eye | 2.27e-31 | 9 |
ocular region | 2.27e-31 | 9 |
visual system | 2.27e-31 | 9 |
face | 2.27e-31 | 9 |
optic cup | 2.27e-31 | 9 |
optic vesicle | 2.27e-31 | 9 |
eye primordium | 2.27e-31 | 9 |
subdivision of head | 7.89e-26 | 11 |
sense organ | 9.49e-24 | 12 |
sensory system | 9.49e-24 | 12 |
entire sense organ system | 9.49e-24 | 12 |
head | 5.48e-22 | 13 |
ectodermal placode | 5.48e-22 | 13 |
craniocervical region | 2.19e-08 | 36 |
anterior region of body | 4.09e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.