FFCP PHASE1:Mm9::chr4:88084804..88084837,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66775|HGNC=|MCL_coexpression_id=3|UniProt=A2AKM2,F7CPS1|association_with_transcript=0bp_to_ENSMUST00000030221,ENSMUST00000068220,ENSMUST00000132493,ENSMUST00000151280,NM_025760,uc008tmx.2,uc008tmy.2_5end|description=CAGE_peak_1_at_Ptplad2_5end|id=chr4:88084804..88084837,-|ontology_enrichment_celltype=CL:0000355!3.30e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,3.15e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.36e-09!193;UBERON:0004120!1.36e-09!193;UBERON:0006603!1.36e-09!193;UBERON:0004872!1.82e-07!33;UBERON:0001134!3.30e-07!9;UBERON:0002036!3.30e-07!9;UBERON:0002385!3.30e-07!9;UBERON:0000486!3.30e-07!9;UBERON:0001015!3.30e-07!9;UBERON:0004290!3.30e-07!9;UBERON:0003082!3.30e-07!9;UBERON:0000383!3.95e-07!10;UBERON:0002100!4.46e-07!98;UBERON:0002204!7.22e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.48e-09,90;UBERON:0004872,1.73e-07,33;UBERON:0001134,3.15e-07,9;UBERON:0002036,3.15e-07,9;UBERON:0002385,3.15e-07,9;UBERON:0000486,3.15e-07,9;UBERON:0007503,3.15e-07,9;UBERON:0001015,3.15e-07,9;UBERON:0002329,3.15e-07,9;UBERON:0003082,3.15e-07,9;UBERON:0003059,3.15e-07,9;UBERON:0007282,3.15e-07,9;UBERON:0004290,3.15e-07,9;UBERON:0009618,3.15e-07,9;UBERON:0000383,3.78e-07,10;UBERON:0002204,8.05e-07,32|phase1_expression=2.24208385946712,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,5.66286595086627,4.25198061518635,4.19737126876888,5.20512572841092,5.34746291062381,3.81950686618227,5.52781385981954,0.992909512008853,0.522399578277871,0.319984845586813,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,213.451131675823,128.138996501903,141.874934616899,271.762947470329,233.601555855788,204.399858626116,34.1180376713814,29.0951792600007,24.5952647896653,5.47673941043627,15.4797861030117,17.3552084360233,26.6368961731768,33.596741190087,7.18762821824858,0,0,0,44.2486229981829,57.8797548676289,66.5216999037901,0.809265843438391,0,0.633831403506179,5.42151251310611,11.5608323494448,27.4469413770827,22.7439263390404,28.419204597844,12.583204641773,8.83702102239575,0.725827286159344,1.62007125998029,0.630974884054146,1.99955689082663,3.53389665522582,0.734944795289724,0.287536413054709,0,0,2.29837208553338,1.22885226604995,0.791317726381163,0.365950574409639,2.6045668527838,1.11673199600552,5.06486349028512,5.04234217663473,2.94628585473668,2.84743361598206,1.67759501242771,0.302904773332736,0.604572480854284,8.40607017234866,1.72084775396277,0,0,0,0,4.63466586434781,27.9505729028015,24.1600984280668,28.2671659608272,0.704217098883403,20.5322363862909,7.64415719119937,0,2.81438353314578,2.02687892380079,4.04419556011827,5.36664234679582,8.80388804400384,10.5393918736026,3.12273588179045,5.1759131313064,5.99600292865752,3.16517545160507,5.29149182110672,4.77533047052767,4.6967043869531,20.6777080395474,33.6152009740952,10.0295446967394,10.8212344045593,13.5765070877862,9.31958806090611,1.17112318804619,1.04723353406728,6.13096932500619,2.39630249011841,4.19931911695385,3.55796635804581,2.39665023047716,1.37250180845588,1.13088916901578,2.60736480288415,2.55715457330331,1.66230435647648,2.59586020908412,13.3409566643914,17.416975885413,12.3834151632501,7.57590681191306,4.68433594665733,6.66716102857071,11.1638520479317,7.9873553452929,7.21186891004075,7.43059577652129,7.30873451565885,8.2785078636485,1.5089759505299,4.53854592402766,5.98233822157426,7.89104636739269,9.45360647367033,9.75106066262066,14.1989674121481,5.7719937377363,9.83098462238529,1.80143534980301,3.6941254921427,10.1491628542396,9.61556845922494,9.54328925743379,10.8902578369197,8.85439042863317,6.47921874126989,5.11574678450897,8.04820204198858,6.07179780309281,2.79751744852917,5.41752631461014,7.29619285912702,9.0643992203706,11.1970558798436,11.2733391758712,1.47202963994889,3.19004298375782,1.32167513193519,1.85115396664481,12.3707185310436,11.3795969211615,12.371276286921,7.66397393568702,8.00560957841533,10.4624094361908,4.2707615539006,8.07024878147653,9.80207314321051,11.5394753783867,8.96834800747953,7.19055526923377,7.5648317456143,5.17767310461355,5.12103332573321,11.7675967988021,11.270773567308,16.4957575554705,13.9645790760691,13.4660774189412,12.8370170362242,9.88987991463334,10.8329122210549,5.42947521255922,3.85388415213294,4.83850806576673,4.32429789249047,6.2961391467759,12.3744674046987,8.68237775108701,8.91190481234969,14.3848068725405,6.80967952455149,6.58947391651396,4.31304619582064,9.67566463938109,4.68056509671841,2.77836765741823,4.12614051100398,4.3419916922703,23.6484083413254,7.20067364727842,7.65935389277522,6.45031325945715,8.21415869009757,8.5428191295326,11.9021820443007,6.43941037930736,12.1379060961767,17.0527811029557,11.6401981119966,13.6006551214063,16.7504432409919,11.1379775107764,88.9668575241706,85.3931923595374,5.4094070032094,7.45029215022778,4.65596710964597,2.93029216480508,0.655739781506702,8.07906967053994,5.04813151066011,5.856581164449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| ||
|EntrezGene=66775 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=A2AKM2,F7CPS1 | |||
|association_with_transcript=0bp_to_ENSMUST00000030221,ENSMUST00000068220,ENSMUST00000132493,ENSMUST00000151280,NM_025760,uc008tmx.2,uc008tmy.2_5end | |||
|description=CAGE_peak_1_at_Ptplad2_5end | |||
|id=chr4:88084804..88084837,- | |||
|ontology_enrichment_celltype=CL:0000355!3.30e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.15e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.36e-09!193;UBERON:0004120!1.36e-09!193;UBERON:0006603!1.36e-09!193;UBERON:0004872!1.82e-07!33;UBERON:0001134!3.30e-07!9;UBERON:0002036!3.30e-07!9;UBERON:0002385!3.30e-07!9;UBERON:0000486!3.30e-07!9;UBERON:0001015!3.30e-07!9;UBERON:0004290!3.30e-07!9;UBERON:0003082!3.30e-07!9;UBERON:0000383!3.95e-07!10;UBERON:0002100!4.46e-07!98;UBERON:0002204!7.22e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.48e-09,90;UBERON:0004872,1.73e-07,33;UBERON:0001134,3.15e-07,9;UBERON:0002036,3.15e-07,9;UBERON:0002385,3.15e-07,9;UBERON:0000486,3.15e-07,9;UBERON:0007503,3.15e-07,9;UBERON:0001015,3.15e-07,9;UBERON:0002329,3.15e-07,9;UBERON:0003082,3.15e-07,9;UBERON:0003059,3.15e-07,9;UBERON:0007282,3.15e-07,9;UBERON:0004290,3.15e-07,9;UBERON:0009618,3.15e-07,9;UBERON:0000383,3.78e-07,10;UBERON:0002204,8.05e-07,32 | |||
|phase1_expression=2.24208385946712,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,5.66286595086627,4.25198061518635,4.19737126876888,5.20512572841092,5.34746291062381,3.81950686618227,5.52781385981954,0.992909512008853,0.522399578277871,0.319984845586813,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,213.451131675823,128.138996501903,141.874934616899,271.762947470329,233.601555855788,204.399858626116,34.1180376713814,29.0951792600007,24.5952647896653,5.47673941043627,15.4797861030117,17.3552084360233,26.6368961731768,33.596741190087,7.18762821824858,0,0,0,44.2486229981829,57.8797548676289,66.5216999037901,0.809265843438391,0,0.633831403506179,5.42151251310611,11.5608323494448,27.4469413770827,22.7439263390404,28.419204597844,12.583204641773,8.83702102239575,0.725827286159344,1.62007125998029,0.630974884054146,1.99955689082663,3.53389665522582,0.734944795289724,0.287536413054709,0,0,2.29837208553338,1.22885226604995,0.791317726381163,0.365950574409639,2.6045668527838,1.11673199600552,5.06486349028512,5.04234217663473,2.94628585473668,2.84743361598206,1.67759501242771,0.302904773332736,0.604572480854284,8.40607017234866,1.72084775396277,0,0,0,0,4.63466586434781,27.9505729028015,24.1600984280668,28.2671659608272,0.704217098883403,20.5322363862909,7.64415719119937,0,2.81438353314578,2.02687892380079,4.04419556011827,5.36664234679582,8.80388804400384,10.5393918736026,3.12273588179045,5.1759131313064,5.99600292865752,3.16517545160507,5.29149182110672,4.77533047052767,4.6967043869531,20.6777080395474,33.6152009740952,10.0295446967394,10.8212344045593,13.5765070877862,9.31958806090611,1.17112318804619,1.04723353406728,6.13096932500619,2.39630249011841,4.19931911695385,3.55796635804581,2.39665023047716,1.37250180845588,1.13088916901578,2.60736480288415,2.55715457330331,1.66230435647648,2.59586020908412,13.3409566643914,17.416975885413,12.3834151632501,7.57590681191306,4.68433594665733,6.66716102857071,11.1638520479317,7.9873553452929,7.21186891004075,7.43059577652129,7.30873451565885,8.2785078636485,1.5089759505299,4.53854592402766,5.98233822157426,7.89104636739269,9.45360647367033,9.75106066262066,14.1989674121481,5.7719937377363,9.83098462238529,1.80143534980301,3.6941254921427,10.1491628542396,9.61556845922494,9.54328925743379,10.8902578369197,8.85439042863317,6.47921874126989,5.11574678450897,8.04820204198858,6.07179780309281,2.79751744852917,5.41752631461014,7.29619285912702,9.0643992203706,11.1970558798436,11.2733391758712,1.47202963994889,3.19004298375782,1.32167513193519,1.85115396664481,12.3707185310436,11.3795969211615,12.371276286921,7.66397393568702,8.00560957841533,10.4624094361908,4.2707615539006,8.07024878147653,9.80207314321051,11.5394753783867,8.96834800747953,7.19055526923377,7.5648317456143,5.17767310461355,5.12103332573321,11.7675967988021,11.270773567308,16.4957575554705,13.9645790760691,13.4660774189412,12.8370170362242,9.88987991463334,10.8329122210549,5.42947521255922,3.85388415213294,4.83850806576673,4.32429789249047,6.2961391467759,12.3744674046987,8.68237775108701,8.91190481234969,14.3848068725405,6.80967952455149,6.58947391651396,4.31304619582064,9.67566463938109,4.68056509671841,2.77836765741823,4.12614051100398,4.3419916922703,23.6484083413254,7.20067364727842,7.65935389277522,6.45031325945715,8.21415869009757,8.5428191295326,11.9021820443007,6.43941037930736,12.1379060961767,17.0527811029557,11.6401981119966,13.6006551214063,16.7504432409919,11.1379775107764,88.9668575241706,85.3931923595374,5.4094070032094,7.45029215022778,4.65596710964597,2.93029216480508,0.655739781506702,8.07906967053994,5.04813151066011,5.85658116444958,3.87762115919038,6.93009514062401,5.34716817797746,5.09537755419898,3.64329631507405,4.67609372658099,5.13874111330481,3.53453448063988,16.4650498841592,7.47875535402472,14.8227133011754,24.9104885688529,5.30980553359851,8.49732226542435,5.74414758233027,5.28094223316515,5.02013217897314,8.9156192903739,7.75284879504663,13.0872142611902,10.6949213515416,6.63677191665214,7.37930260024991,10.3135543248187,1.36175842301515,5.40183282093931,4.01011919726539,8.57348140126369,11.5271151867478,7.66985915688903,8.72109809191241,4.56697423671899,10.3255551548033,5.93129798418696,5.29268155331909,5.44124634706884,4.52100394748536,5.12659861889325,8.35606408021955,5.25250879184196,6.99554007911642,3.8939313422207,12.4735742982432,18.9875918526165,21.6677597022563,6.59289599516419,3.8274383761887,5.71945433016307,10.538662659619,8.11718423477216,9.53579819250524,7.63736494412091,7.43389584915668,11.5892096262304,9.82848601478391,9.19988502463662,11.3548533148012,9.17077555416781,10.1663750542163,13.0877970992015,6.09190374471426,6.83473244395618,2.25477175473676,1.64468200648377,3.14371131868485,3.11121901350476,1.6790777052105,3.71703476079712,2.69921648885234,4.6873578543822,1.8874681996628,2.17425708743405,1.72818003754719,3.47612232690996,3.85177909051312,2.67048488628551,2.33857481360031,3.222480522014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| |||
|short_description=p1@Ptplad2 | |||
}} |
Revision as of 05:34, 14 September 2013
Short description: | p1@Ptplad2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptplad2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000030221, ENSMUST00000068220, ENSMUST00000132493, ENSMUST00000151280, NM_025760, uc008tmx.2, uc008tmy.2_5end |
EntrezGene: | Ptplad2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.48e-09 | 90 |
splanchnic layer of lateral plate mesoderm | 1.73e-07 | 33 |
skeletal muscle tissue | 3.15e-07 | 9 |
striated muscle tissue | 3.15e-07 | 9 |
muscle tissue | 3.15e-07 | 9 |
multilaminar epithelium | 3.15e-07 | 9 |
epithelial vesicle | 3.15e-07 | 9 |
musculature | 3.15e-07 | 9 |
somite | 3.15e-07 | 9 |
myotome | 3.15e-07 | 9 |
presomitic mesoderm | 3.15e-07 | 9 |
presumptive segmental plate | 3.15e-07 | 9 |
dermomyotome | 3.15e-07 | 9 |
trunk paraxial mesoderm | 3.15e-07 | 9 |
musculature of body | 3.78e-07 | 10 |
musculoskeletal system | 8.05e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.