FFCP PHASE1:Mm9::chr5:108561532..108561557,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=73130|HGNC=|MCL_coexpression_id=3492|UniProt=Q3V440,D3Z615|association_with_transcript=0bp_to_ENSMUST00000117759,ENSMUST00000119784_5end|description=CAGE_peak_2_at_Tmed5_5end|id=chr5:108561532..108561557,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!1.03e-09!131;UBERON:0009142!1.03e-09!131;UBERON:0000077!2.68e-09!97;UBERON:0005256!2.42e-08!47;UBERON:0001041!4.65e-08!92;UBERON:0002365!6.65e-07!25;UBERON:0002330!6.65e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.43e-09,45;UBERON:0002100,1.47e-08,90;UBERON:0002365,6.65e-07,25;UBERON:0002330,6.65e-07,25|phase1_expression=4.96461426024861,3.14077866875425,2.72999543633722,5.44435580352294,4.50806156951712,7.21880869221126,5.13947809310157,5.4231795845462,29.0024767632433,30.4283884218592,11.6428218393343,11.7265073723145,2.9104124088305,3.84649770643589,9.32707333083856,4.04950534779652,2.09868563438444,4.88966356305268,3.01651753932625,5.51706547337439,4.42225108785563,9.63122226648587,13.5823890352246,6.87967418011649,6.42345986988076,1.14846392823004,9.04600191934057,4.95583835177545,5.70070258369122,6.5527833737582,10.8647950221099,0.635030673459631,0.61506478758457,0,2.3108129580102,5.15327400611326,2.85837098767317,10.8818223991596,10.1573594788094,8.89990364755457,8.2352408324342,12.294818729252,13.5942898848723,18.2550386064587,17.740962963415,17.4369414553597,3.9119567217402,4.36050312760893,4.17403747195497,9.72149495371417,5.5994568650145,1.43752564364972,14.2615215149076,7.97898356212479,9.07453257684653,14.1492689819771,11.4613375975503,10.3134418455488,0.202316460859598,0.528990979272033,0,4.74382344896785,7.11435836888911,3.1496490104849,5.93319817540185,3.5524005747305,2.09720077362883,4.2264013585371,2.28117147078651,1.08004750665353,1.47227472945967,2.85650984403804,1.76694832761291,1.34739879136449,0.575072826109418,0,1.10115880999389,4.21368215681119,4.91540906419979,1.05509030184155,1.09785172322892,0.52091337055676,5.30447698102624,5.6276261003168,5.65353516774197,3.53554302568401,3.41692033917847,2.42319279572891,18.0228340132978,17.986031305415,8.69593466105033,16.3480536626463,21.759082678648,29.1439723484421,27.2906095328021,43.0105811613442,12.9208866521212,15.5091593546033,6.75443611967459,9.89350808628953,3.23939865486365,1.28326477414318,2.54805239706646,0,11.6905162146056,10.8944742154292,10.1104889002957,22.7225920640929,16.8309624370662,11.4300447079915,7.11289839741157,9.74289530598852,5.99600292865752,8.89263579260473,7.17291113527799,13.0693254982862,8.40462890296871,58.4181401956443,6.19227386364912,5.82360659810673,5.74187947997023,5.33362778448744,16.775258509631,4.09893115816166,2.93225389538837,8.17462576667492,13.539109069169,11.3981518888747,15.75670815706,4.49371918214468,8.23501085073528,1.63350657746724,4.51943232499919,4.34716277461562,3.74018480207208,5.51620294430376,5.70300437561771,7.34001126599549,5.81262344397452,54.7148825304832,4.29397461776922,3.21862946206862,4.32149111532838,3.0140963567143,2.38127747029647,4.22775276940004,2.90475346135159,13.7112786491678,2.15567992932842,5.29497024469894,6.15828934573821,5.47989331068937,9.73165372289593,8.00979983000983,14.1989674121481,4.57778813682534,7.72434506044558,12.3526995415063,15.9131559661532,4.97101854085205,4.45599513964083,5.94204802821349,4.97163944728941,4.32881309844288,4.62801338662135,4.41814495025775,4.56064782379353,6.07179780309281,6.41783414662574,7.88003827579657,8.18794976413143,7.74859933354261,8.34290438105992,8.72341721942416,7.14985825118033,2.77842453424068,6.93879444265976,8.72686869989696,5.33220626338085,3.94802342162745,5.67016829817211,7.46229041106367,6.22658522765637,7.79925067061493,5.21981967698963,8.89374355509659,6.78605063760728,5.76973768919337,5.65395852645448,6.29173586057955,3.24207074812041,6.57166201739412,1.70701110857774,5.9409226557059,2.25415471346161,7.127796474586,5.62462212786115,5.26018649177389,5.31186911843761,7.67572769493931,8.16393384775149,9.87177311374404,43.2820835547237,3.00321190288969,6.4864468387357,7.19558759631532,5.07150303471257,5.30589751455317,8.14802725700543,5.17853047411459,25.9416362840057,15.1008777253445,12.9391385874619,20.0956111740992,19.9704110793319,19.9537313578218,21.7070870361514,41.9725863586129,11.0851914099963,7.95863929436036,7.00749398700711,3.05541154395339,5.63256595892405,5.02518772325447,4.99891645860629,8.97614780145875,9.14283835815908,8.19419351700467,6.218735977642,9.99566219766002,10.7064688756855,11.8612228036839,10.5553898757491,14.1415477792864,48.6846630288846,33.3883463028726,4.49541651965817,6.79827782234778,17.3771042099276,11.8661335786055,7.2566890465739,7.41833614163613,3.66219776145758,5.01834475700359,4.45597348164788,4.81230102341015,4.45291771842384,6.42962887404886,2.76701444562566,2.57057053137446,11.7810270722863,1.95872164033981,6.51547837414304,7.09371528781903,21.2392221343941,4.127270814634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| ||
|EntrezGene=73130 | |||
|HGNC= | |||
|MCL_coexpression_id=3492 | |||
|UniProt=Q3V440,D3Z615 | |||
|association_with_transcript=0bp_to_ENSMUST00000117759,ENSMUST00000119784_5end | |||
|description=CAGE_peak_2_at_Tmed5_5end | |||
|id=chr5:108561532..108561557,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.03e-09!131;UBERON:0009142!1.03e-09!131;UBERON:0000077!2.68e-09!97;UBERON:0005256!2.42e-08!47;UBERON:0001041!4.65e-08!92;UBERON:0002365!6.65e-07!25;UBERON:0002330!6.65e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.43e-09,45;UBERON:0002100,1.47e-08,90;UBERON:0002365,6.65e-07,25;UBERON:0002330,6.65e-07,25 | |||
|phase1_expression=4.96461426024861,3.14077866875425,2.72999543633722,5.44435580352294,4.50806156951712,7.21880869221126,5.13947809310157,5.4231795845462,29.0024767632433,30.4283884218592,11.6428218393343,11.7265073723145,2.9104124088305,3.84649770643589,9.32707333083856,4.04950534779652,2.09868563438444,4.88966356305268,3.01651753932625,5.51706547337439,4.42225108785563,9.63122226648587,13.5823890352246,6.87967418011649,6.42345986988076,1.14846392823004,9.04600191934057,4.95583835177545,5.70070258369122,6.5527833737582,10.8647950221099,0.635030673459631,0.61506478758457,0,2.3108129580102,5.15327400611326,2.85837098767317,10.8818223991596,10.1573594788094,8.89990364755457,8.2352408324342,12.294818729252,13.5942898848723,18.2550386064587,17.740962963415,17.4369414553597,3.9119567217402,4.36050312760893,4.17403747195497,9.72149495371417,5.5994568650145,1.43752564364972,14.2615215149076,7.97898356212479,9.07453257684653,14.1492689819771,11.4613375975503,10.3134418455488,0.202316460859598,0.528990979272033,0,4.74382344896785,7.11435836888911,3.1496490104849,5.93319817540185,3.5524005747305,2.09720077362883,4.2264013585371,2.28117147078651,1.08004750665353,1.47227472945967,2.85650984403804,1.76694832761291,1.34739879136449,0.575072826109418,0,1.10115880999389,4.21368215681119,4.91540906419979,1.05509030184155,1.09785172322892,0.52091337055676,5.30447698102624,5.6276261003168,5.65353516774197,3.53554302568401,3.41692033917847,2.42319279572891,18.0228340132978,17.986031305415,8.69593466105033,16.3480536626463,21.759082678648,29.1439723484421,27.2906095328021,43.0105811613442,12.9208866521212,15.5091593546033,6.75443611967459,9.89350808628953,3.23939865486365,1.28326477414318,2.54805239706646,0,11.6905162146056,10.8944742154292,10.1104889002957,22.7225920640929,16.8309624370662,11.4300447079915,7.11289839741157,9.74289530598852,5.99600292865752,8.89263579260473,7.17291113527799,13.0693254982862,8.40462890296871,58.4181401956443,6.19227386364912,5.82360659810673,5.74187947997023,5.33362778448744,16.775258509631,4.09893115816166,2.93225389538837,8.17462576667492,13.539109069169,11.3981518888747,15.75670815706,4.49371918214468,8.23501085073528,1.63350657746724,4.51943232499919,4.34716277461562,3.74018480207208,5.51620294430376,5.70300437561771,7.34001126599549,5.81262344397452,54.7148825304832,4.29397461776922,3.21862946206862,4.32149111532838,3.0140963567143,2.38127747029647,4.22775276940004,2.90475346135159,13.7112786491678,2.15567992932842,5.29497024469894,6.15828934573821,5.47989331068937,9.73165372289593,8.00979983000983,14.1989674121481,4.57778813682534,7.72434506044558,12.3526995415063,15.9131559661532,4.97101854085205,4.45599513964083,5.94204802821349,4.97163944728941,4.32881309844288,4.62801338662135,4.41814495025775,4.56064782379353,6.07179780309281,6.41783414662574,7.88003827579657,8.18794976413143,7.74859933354261,8.34290438105992,8.72341721942416,7.14985825118033,2.77842453424068,6.93879444265976,8.72686869989696,5.33220626338085,3.94802342162745,5.67016829817211,7.46229041106367,6.22658522765637,7.79925067061493,5.21981967698963,8.89374355509659,6.78605063760728,5.76973768919337,5.65395852645448,6.29173586057955,3.24207074812041,6.57166201739412,1.70701110857774,5.9409226557059,2.25415471346161,7.127796474586,5.62462212786115,5.26018649177389,5.31186911843761,7.67572769493931,8.16393384775149,9.87177311374404,43.2820835547237,3.00321190288969,6.4864468387357,7.19558759631532,5.07150303471257,5.30589751455317,8.14802725700543,5.17853047411459,25.9416362840057,15.1008777253445,12.9391385874619,20.0956111740992,19.9704110793319,19.9537313578218,21.7070870361514,41.9725863586129,11.0851914099963,7.95863929436036,7.00749398700711,3.05541154395339,5.63256595892405,5.02518772325447,4.99891645860629,8.97614780145875,9.14283835815908,8.19419351700467,6.218735977642,9.99566219766002,10.7064688756855,11.8612228036839,10.5553898757491,14.1415477792864,48.6846630288846,33.3883463028726,4.49541651965817,6.79827782234778,17.3771042099276,11.8661335786055,7.2566890465739,7.41833614163613,3.66219776145758,5.01834475700359,4.45597348164788,4.81230102341015,4.45291771842384,6.42962887404886,2.76701444562566,2.57057053137446,11.7810270722863,1.95872164033981,6.51547837414304,7.09371528781903,21.2392221343941,4.12727081463468,7.55808892411878,16.597247018519,6.496641643377,12.912276213645,9.56184684722418,9.45187696641514,9.26893183800275,22.4386098134429,22.1379078007497,26.8152412445286,5.7874732978144,2.88097750450096,1.16422815404479,3.42939256050548,4.61084607469911,3.56737635204141,4.60737257685939,1.2178597964584,17.835049812842,14.4045808187398,8.60060752414351,16.818397800031,15.1776561094151,17.6716870039497,17.7864792564673,17.3989353729765,6.12109756922687,6.30446026835733,5.98048082792484,4.54051109519089,6.48180845793991,3.76736914009382,2.32380187125743,3.20289442489132,19.2075625893056,13.8551937800421,15.4783970660955,18.1387417422872,5.53587988766987,6.30290348093231,7.34436317588249,8.15444354456428,14.848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| |||
|short_description=p2@Tmed5 | |||
}} | |||
Revision as of 05:52, 14 September 2013
| Short description: | p2@Tmed5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Tmed5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:3492 |
| Association with transcript: | 0bp_to_ENSMUST00000117759, ENSMUST00000119784_5end |
| EntrezGene: | Tmed5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk mesenchyme | 2.43e-09 | 45 |
| trunk | 1.47e-08 | 90 |
| exocrine gland | 6.65e-07 | 25 |
| exocrine system | 6.65e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
