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FFCP PHASE1:Hg19::chr9:126777688..126777700,+: Difference between revisions

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{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=9355|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6594|TSSclassifier=S|UniProt=|association_with_transcript=12bp_to_ENST00000488674_5end|coexpression_cluster_id=C16|description=CAGE_peak_6_at_LHX2_5end|id=chr9:126777688..126777700,+|ontology_enrichment_celltype=CL:0002605!2.09e-09!3;CL:0002150!1.88e-08!3;CL:0000861!1.88e-08!3|ontology_enrichment_celltype_v019=CL:0002586;2.59e-12;3!CL:0000149;1.44e-09;4!CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6|ontology_enrichment_celltype_v019_2=CL:0002586,2.31e-12,3;CL:0000149,1.32e-09,4;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6|ontology_enrichment_development_v019=CL:0000031;8.48e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:154;9.07e-18;2!DOID:4236;9.07e-18;2|ontology_enrichment_disease_v019_2=DOID:154,1.07e-17,2;DOID:4236,1.07e-17,2|ontology_enrichment_uberon=UBERON:0001893!1.25e-37!34;UBERON:0001869!4.92e-37!32;UBERON:0000956!7.48e-37!25;UBERON:0000203!7.48e-37!25;UBERON:0002791!7.44e-36!33;UBERON:0002780!4.28e-33!41;UBERON:0001890!4.28e-33!41;UBERON:0006240!4.28e-33!41;UBERON:0003056!5.72e-33!61;UBERON:0003080!3.74e-32!42;UBERON:0002020!1.14e-31!34;UBERON:0003528!1.14e-31!34;UBERON:0002619!1.10e-29!22;UBERON:0001950!6.47e-29!20;UBERON:0005743!1.59e-27!86;UBERON:0000955!3.36e-27!69;UBERON:0006238!3.36e-27!69;UBERON:0000073!1.39e-25!94;UBERON:0001016!1.39e-25!94;UBERON:0001017!2.58e-25!82;UBERON:0002616!6.82e-23!59;UBERON:0001049!5.88e-22!57;UBERON:0005068!5.88e-22!57;UBERON:0006241!5.88e-22!57;UBERON:0007135!5.88e-22!57;UBERON:0002346!3.91e-21!90;UBERON:0003075!6.27e-21!86;UBERON:0007284!6.27e-21!86;UBERON:0000033!3.66e-20!123;UBERON:0000153!9.15e-19!129;UBERON:0007811!9.15e-19!129;UBERON:0001871!1.72e-16!7;UBERON:0000924!4.55e-15!173;UBERON:0006601!4.55e-15!173;UBERON:0004121!1.09e-14!169;UBERON:0000200!3.53e-11!6;UBERON:0002771!1.83e-09!3;UBERON:0002021!6.01e-09!5;UBERON:0000349!8.00e-09!5;UBERON:0007023!1.46e-07!115|ontology_enrichment_uberon_v019=UBERON:0002771;5.48e-18;2!UBERON:0001781;2.59e-12;3!UBERON:0001782;2.59e-12;3!UBERON:0000966;6.55e-08;5!UBERON:0002021;6.55e-08;5!UBERON:0005388;6.55e-08;5!UBERON:0001802;6.55e-08;5!UBERON:0001950;2.60e-07;20!UBERON:0000200;7.17e-07;6!UBERON:0002619;9.39e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.48e-18,2;UBERON:0001782,2.31e-12,3;UBERON:0005424,2.31e-12,3;UBERON:0001781,1.32e-09,4;UBERON:0002021,7.49e-08,5;UBERON:0001950,2.77e-07,20;UBERON:0001017,6.43e-07,81;UBERON:0000200,7.17e-07,6;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6;UBERON:0002619,9.95e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.958120975510189,0.87879847716362,0.458480434487708,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,1.04174996959975,0,0.60298219312704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.387025325156341,0.292357268344742,0.164230914106418,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.544813624446302,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53876168215693,0.876336514945499,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2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|DPIdataset=robustDPI
|EntrezGene=9355
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=6594
|TSSclassifier=S
|UniProt=
|association_with_transcript=12bp_to_ENST00000488674_5end
|coexpression_cluster_id=C16
|description=CAGE_peak_6_at_LHX2_5end
|id=chr9:126777688..126777700,+
|ontology_enrichment_celltype=CL:0002605!2.09e-09!3;CL:0002150!1.88e-08!3;CL:0000861!1.88e-08!3
|ontology_enrichment_celltype_v019=CL:0002586;2.59e-12;3!CL:0000149;1.44e-09;4!CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6
|ontology_enrichment_celltype_v019_2=CL:0002586,2.31e-12,3;CL:0000149,1.32e-09,4;CL:0000540,8.48e-07,6;CL:0000031,8.48e-07,6;CL:0000404,8.48e-07,6
|ontology_enrichment_development_v019=CL:0000031;8.48e-07;6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:154;9.07e-18;2!DOID:4236;9.07e-18;2
|ontology_enrichment_disease_v019_2=DOID:154,1.07e-17,2;DOID:4236,1.07e-17,2
|ontology_enrichment_uberon=UBERON:0001893!1.25e-37!34;UBERON:0001869!4.92e-37!32;UBERON:0000956!7.48e-37!25;UBERON:0000203!7.48e-37!25;UBERON:0002791!7.44e-36!33;UBERON:0002780!4.28e-33!41;UBERON:0001890!4.28e-33!41;UBERON:0006240!4.28e-33!41;UBERON:0003056!5.72e-33!61;UBERON:0003080!3.74e-32!42;UBERON:0002020!1.14e-31!34;UBERON:0003528!1.14e-31!34;UBERON:0002619!1.10e-29!22;UBERON:0001950!6.47e-29!20;UBERON:0005743!1.59e-27!86;UBERON:0000955!3.36e-27!69;UBERON:0006238!3.36e-27!69;UBERON:0000073!1.39e-25!94;UBERON:0001016!1.39e-25!94;UBERON:0001017!2.58e-25!82;UBERON:0002616!6.82e-23!59;UBERON:0001049!5.88e-22!57;UBERON:0005068!5.88e-22!57;UBERON:0006241!5.88e-22!57;UBERON:0007135!5.88e-22!57;UBERON:0002346!3.91e-21!90;UBERON:0003075!6.27e-21!86;UBERON:0007284!6.27e-21!86;UBERON:0000033!3.66e-20!123;UBERON:0000153!9.15e-19!129;UBERON:0007811!9.15e-19!129;UBERON:0001871!1.72e-16!7;UBERON:0000924!4.55e-15!173;UBERON:0006601!4.55e-15!173;UBERON:0004121!1.09e-14!169;UBERON:0000200!3.53e-11!6;UBERON:0002771!1.83e-09!3;UBERON:0002021!6.01e-09!5;UBERON:0000349!8.00e-09!5;UBERON:0007023!1.46e-07!115
|ontology_enrichment_uberon_v019=UBERON:0002771;5.48e-18;2!UBERON:0001781;2.59e-12;3!UBERON:0001782;2.59e-12;3!UBERON:0000966;6.55e-08;5!UBERON:0002021;6.55e-08;5!UBERON:0005388;6.55e-08;5!UBERON:0001802;6.55e-08;5!UBERON:0001950;2.60e-07;20!UBERON:0000200;7.17e-07;6!UBERON:0002619;9.39e-07;22
|ontology_enrichment_uberon_v019_2=UBERON:0002771,5.48e-18,2;UBERON:0001782,2.31e-12,3;UBERON:0005424,2.31e-12,3;UBERON:0001781,1.32e-09,4;UBERON:0002021,7.49e-08,5;UBERON:0001950,2.77e-07,20;UBERON:0001017,6.43e-07,81;UBERON:0000200,7.17e-07,6;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6;UBERON:0002619,9.95e-07,22
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.958120975510189,0.87879847716362,0.458480434487708,0.246301768349837,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,0,0,0,0.27470839445503,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0.1137934482855,0,0,0,0,1.04174996959975,0,0.60298219312704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.387025325156341,0.292357268344742,0.164230914106418,0,0.0882561266915003,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0.229073192331831,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0.544813624446302,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53876168215693,0.876336514945499,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.553033744606923,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.205116364240755,1.00828678488687,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0.500335809236594,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0.315543124386369,0.339957450954573,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p6@LHX2
}}

Revision as of 07:22, 14 September 2013

Short description:p6@LHX2
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_LHX2_5end
Coexpression cluster:C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain
Association with transcript: 12bp_to_ENST00000488674_5end
EntrezGene:LHX2
HGNC: 6594
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








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