FFCP PHASE1:Mm9::chr6:54191887..54191906,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:54191887..54191906,-|id=chr6:54191887..54191906,-|ontology_enrichment_celltype=CL:0000473!9.93e-08!3;CL:0000627!9.93e-08!3;CL:0000682!9.93e-08!3|ontology_enrichment_celltype_v019_2=CL:0000682,1.75e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.54e-17!15;UBERON:0000160!2.31e-13!43;UBERON:0001242!2.85e-13!13;UBERON:0000060!2.85e-13!13;UBERON:0001262!2.85e-13!13;UBERON:0004786!2.85e-13!13;UBERON:0004923!1.12e-09!24;UBERON:0005409!1.50e-08!59;UBERON:0000331!2.15e-08!3;UBERON:0002116!2.15e-08!3;UBERON:0001204!2.15e-08!3;UBERON:0001168!2.15e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.55e-33,4;UBERON:0000331,4.47e-25,3;UBERON:0002116,4.47e-25,3;UBERON:0001204,4.47e-25,3;UBERON:0001168,4.47e-25,3;UBERON:0000160,2.23e-20,31;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0000344,1.79e-13,15;UBERON:0005409,2.99e-13,47;UBERON:0004923,1.95e-08,24|phase1_expression=0,2.44282785347553,0.909998478779072,0.90739263392049,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,1.72269589234506,0.430761996159075,1.72376986148711,8.17100703662408,10.3332353201572,1.55211357458713,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0,0,3.32170343081158,0.164698954724011,0,0.198956472041151,0,0.898819408654221,1.29682829924817,0.597423819763102,0,0,0,0.407302655690628,0,0,0.0632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0,0,0,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:54191887..54191906,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:54191887..54191906,- | |||
|id=chr6:54191887..54191906,- | |||
|ontology_enrichment_celltype=CL:0000473!9.93e-08!3;CL:0000627!9.93e-08!3;CL:0000682!9.93e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.75e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.54e-17!15;UBERON:0000160!2.31e-13!43;UBERON:0001242!2.85e-13!13;UBERON:0000060!2.85e-13!13;UBERON:0001262!2.85e-13!13;UBERON:0004786!2.85e-13!13;UBERON:0004923!1.12e-09!24;UBERON:0005409!1.50e-08!59;UBERON:0000331!2.15e-08!3;UBERON:0002116!2.15e-08!3;UBERON:0001204!2.15e-08!3;UBERON:0001168!2.15e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.55e-33,4;UBERON:0000331,4.47e-25,3;UBERON:0002116,4.47e-25,3;UBERON:0001204,4.47e-25,3;UBERON:0001168,4.47e-25,3;UBERON:0000160,2.23e-20,31;UBERON:0001242,1.57e-15,13;UBERON:0001262,1.57e-15,13;UBERON:0004786,1.57e-15,13;UBERON:0000344,1.79e-13,15;UBERON:0005409,2.99e-13,47;UBERON:0004923,1.95e-08,24 | |||
|phase1_expression=0,2.44282785347553,0.909998478779072,0.90739263392049,1.50268718983904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,1.72269589234506,0.430761996159075,1.72376986148711,8.17100703662408,10.3332353201572,1.55211357458713,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.793351699990633,0,0,0,0,0,0,3.32170343081158,0.164698954724011,0,0.198956472041151,0,0.898819408654221,1.29682829924817,0.597423819763102,0,0,0,0.407302655690628,0,0,0.0632365371242573,0.442830443938806,0.470996183524124,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0,0,0,0.717589654087649,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:54191887..54191906,- | |||
}} |
Revision as of 10:19, 14 September 2013
Short description: | p@chr6:54191887..54191906, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:54191887..54191906, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.75e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 8.55e-33 | 4 |
ileal mucosa | 4.47e-25 | 3 |
ileum | 4.47e-25 | 3 |
mucosa of small intestine | 4.47e-25 | 3 |
wall of small intestine | 4.47e-25 | 3 |
intestine | 2.23e-20 | 31 |
intestinal mucosa | 1.57e-15 | 13 |
wall of intestine | 1.57e-15 | 13 |
gastrointestinal system mucosa | 1.57e-15 | 13 |
mucosa | 1.79e-13 | 15 |
gastrointestinal system | 2.99e-13 | 47 |
organ component layer | 1.95e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.