FFCP PHASE1:Hg19::chrX:138286539..138286568,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2258|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3670|TSSclassifier=S|UniProt=|association_with_transcript=-94bp_to_uc004faq.2_5end|description=CAGE_peak_9_at_FGF13_5end|id=chrX:138286539..138286568,-|ontology_enrichment_celltype=CL:0002057!7.60e-09!42;CL:0000860!9.94e-08!45|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000167,5.26e-07,1;CL:0000164,5.26e-07,1;CL:0000502,5.26e-07,1;CL:0000172,5.26e-07,1;CL:0000173,5.26e-07,1;CL:0002351,5.26e-07,1;CL:0000511,8.27e-07,1;CL:0002625,8.27e-07,1;CL:0000216,8.27e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3095!4.75e-07!22;DOID:2994!4.75e-07!22|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:4430,5.26e-07,1|ontology_enrichment_uberon=UBERON:0001017!9.05e-15!82;UBERON:0005743!4.34e-14!86;UBERON:0001049!1.37e-13!57;UBERON:0005068!1.37e-13!57;UBERON:0006241!1.37e-13!57;UBERON:0007135!1.37e-13!57;UBERON:0000073!1.40e-13!94;UBERON:0001016!1.40e-13!94;UBERON:0007023!5.13e-13!115;UBERON:0002780!1.20e-12!41;UBERON:0001890!1.20e-12!41;UBERON:0006240!1.20e-12!41;UBERON:0003080!4.05e-12!42;UBERON:0002346!1.41e-11!90;UBERON:0002616!8.01e-11!59;UBERON:0001893!1.02e-10!34;UBERON:0002791!1.82e-10!33;UBERON:0000955!2.37e-10!69;UBERON:0006238!2.37e-10!69;UBERON:0002020!5.19e-10!34;UBERON:0003528!5.19e-10!34;UBERON:0001869!6.94e-10!32;UBERON:0003075!7.63e-10!86;UBERON:0007284!7.63e-10!86;UBERON:0000956!4.98e-09!25;UBERON:0000203!4.98e-09!25;UBERON:0003056!1.37e-08!61;UBERON:0000924!3.39e-08!173;UBERON:0006601!3.39e-08!173;UBERON:0000473!6.24e-08!8;UBERON:0000033!1.31e-07!123;UBERON:0000153!1.91e-07!129;UBERON:0007811!1.91e-07!129;UBERON:0001950!2.20e-07!20;UBERON:0002619!2.51e-07!22;UBERON:0000468!4.61e-07!659;UBERON:0004121!5.28e-07!169;UBERON:0003101!8.80e-07!22;UBERON:0000079!8.80e-07!22|ontology_enrichment_uberon_v019=UBERON:0000473;9.62e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001831,6.99e-07,1;UBERON:0001567,6.99e-07,1;UBERON:0008801,6.99e-07,1;UBERON:0001136,8.27e-07,1;UBERON:0001343,8.27e-07,1;UBERON:0004910,8.27e-07,1;UBERON:0005154,8.27e-07,1;UBERON:0005295,8.27e-07,1;UBERON:0004813,8.27e-07,1;UBERON:0005297,8.27e-07,1;UBERON:0005294,8.27e-07,1;UBERON:0010141,8.27e-07,1;UBERON:0005891,8.27e-07,1|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0,0,1.03423704220986,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,1.16083695451434,2.26954089876456,0.622822248995575,0.251248665256743,1.0429658368404,0.434377689410233,0.605399502633369,1.84138817993782,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,1.00416183829401,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.516628905878827,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,1.05965950579781,1.20036438433761,0.824420233907511,0.772921620136887,0.558350568994769,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0.348581828608555,0.310983165046111,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0,0.433099343283221,0,1.14152491340759,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,1.84267891867784,1.27587750330633,0,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,2.52717460302113,0,0,2.50634477090067,0,0,0,0,0,0.614481528616916,0.447352215784832,0.1668491417119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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3670 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-94bp_to_uc004faq.2_5end | |||
|description=CAGE_peak_9_at_FGF13_5end | |||
|id=chrX:138286539..138286568,- | |||
|ontology_enrichment_celltype=CL:0002057!7.60e-09!42;CL:0000860!9.94e-08!45 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.26e-07,1;CL:0000164,5.26e-07,1;CL:0000502,5.26e-07,1;CL:0000172,5.26e-07,1;CL:0000173,5.26e-07,1;CL:0002351,5.26e-07,1;CL:0000511,8.27e-07,1;CL:0002625,8.27e-07,1;CL:0000216,8.27e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!4.75e-07!22;DOID:2994!4.75e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.05e-15!82;UBERON:0005743!4.34e-14!86;UBERON:0001049!1.37e-13!57;UBERON:0005068!1.37e-13!57;UBERON:0006241!1.37e-13!57;UBERON:0007135!1.37e-13!57;UBERON:0000073!1.40e-13!94;UBERON:0001016!1.40e-13!94;UBERON:0007023!5.13e-13!115;UBERON:0002780!1.20e-12!41;UBERON:0001890!1.20e-12!41;UBERON:0006240!1.20e-12!41;UBERON:0003080!4.05e-12!42;UBERON:0002346!1.41e-11!90;UBERON:0002616!8.01e-11!59;UBERON:0001893!1.02e-10!34;UBERON:0002791!1.82e-10!33;UBERON:0000955!2.37e-10!69;UBERON:0006238!2.37e-10!69;UBERON:0002020!5.19e-10!34;UBERON:0003528!5.19e-10!34;UBERON:0001869!6.94e-10!32;UBERON:0003075!7.63e-10!86;UBERON:0007284!7.63e-10!86;UBERON:0000956!4.98e-09!25;UBERON:0000203!4.98e-09!25;UBERON:0003056!1.37e-08!61;UBERON:0000924!3.39e-08!173;UBERON:0006601!3.39e-08!173;UBERON:0000473!6.24e-08!8;UBERON:0000033!1.31e-07!123;UBERON:0000153!1.91e-07!129;UBERON:0007811!1.91e-07!129;UBERON:0001950!2.20e-07!20;UBERON:0002619!2.51e-07!22;UBERON:0000468!4.61e-07!659;UBERON:0004121!5.28e-07!169;UBERON:0003101!8.80e-07!22;UBERON:0000079!8.80e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.62e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,6.99e-07,1;UBERON:0001567,6.99e-07,1;UBERON:0008801,6.99e-07,1;UBERON:0001136,8.27e-07,1;UBERON:0001343,8.27e-07,1;UBERON:0004910,8.27e-07,1;UBERON:0005154,8.27e-07,1;UBERON:0005295,8.27e-07,1;UBERON:0004813,8.27e-07,1;UBERON:0005297,8.27e-07,1;UBERON:0005294,8.27e-07,1;UBERON:0010141,8.27e-07,1;UBERON:0005891,8.27e-07,1 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0,0,1.03423704220986,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0.426224750532694,1.16083695451434,2.26954089876456,0.622822248995575,0.251248665256743,1.0429658368404,0.434377689410233,0.605399502633369,1.84138817993782,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.71153252537342,1.00416183829401,0.402829317109147,0,0.488124115096339,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.516628905878827,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,1.05965950579781,1.20036438433761,0.824420233907511,0.772921620136887,0.558350568994769,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0.731842236777572,0.132529768321485,0.348581828608555,0.310983165046111,1.00928340350251,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.579652024875384,0,0.433099343283221,0,1.14152491340759,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,1.84267891867784,1.27587750330633,0,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,2.52717460302113,0,0,2.50634477090067,0,0,0,0,0,0.614481528616916,0.447352215784832,0.166849141711909,0.390776190804081,0,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0.699679999969566,0,0.1137934482855,1.27126825146383,0,0,0.583209226766509,0,0,0.361789315876224,1.52581736317083,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.335643173951685,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0.313265848516366,0.269604531922708,0,0.702793337176017,0,0,0,0,0,3.0607276163049,0.505492637027904,0.751617097072463,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0.577901179803038,0,0.136905378891993,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0.272406812223151,0,0.275078873194468,0.415440338029185,0,0,0.425246896606173,0,0.236417121897595,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.453248366080503,0.146552233678082,1.32506888912221,0,0.39669780522807,0,0,0.213574825135389,0,0,0,0,0,0,0,0.7520696820681,0.306345576763462,0.327872630709804,0.157054096250234,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0.255788742607303,0,0.471797825567689,0,0.169732529954025,0.212574920101683,0.743614585554013,0.558644917973244,0,0,0,0.705351887381368,0.3062454773532,0.256916900385838,0,0.478901577171454,0.205116364240755,3.78107544332577,0.484100767249525,0.161475645631851,0,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.253663240775627,1.64092442705466,1.64477330057155,0,0.879356221798103,0.383287282918786,0.535701835878287,0,0,0.227662191351298,0.0887023701626388,0,0,0,0.263091094251396,0,0.111231401892069,0.39246546425257,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0.347716544605159,1.60342272946051,0,0.17071847709395,0,3.44181887056222,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0,0,0.48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| |||
|short_description=p9@FGF13 | |||
}} |
Revision as of 10:57, 14 September 2013
Short description: | p9@FGF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_FGF13_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_uc004faq.2_5end |
EntrezGene: | FGF13 |
HGNC: | 3670 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.26e-07 | 1 |
enteroendocrine cell | 5.26e-07 | 1 |
type D enteroendocrine cell | 5.26e-07 | 1 |
somatostatin secreting cell | 5.26e-07 | 1 |
pancreatic D cell | 5.26e-07 | 1 |
progenitor cell of endocrine pancreas | 5.26e-07 | 1 |
androgen binding protein secreting cell | 8.27e-07 | 1 |
seminiferous tubule epithelial cell | 8.27e-07 | 1 |
Sertoli cell | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 6.99e-07 | 1 |
cheek | 6.99e-07 | 1 |
parotid gland primordium | 6.99e-07 | 1 |
mesothelium | 8.27e-07 | 1 |
seminiferous tubule of testis | 8.27e-07 | 1 |
epithelium of male gonad | 8.27e-07 | 1 |
epithelial cord | 8.27e-07 | 1 |
sex cord | 8.27e-07 | 1 |
seminiferous tubule epithelium | 8.27e-07 | 1 |
testis sex cord | 8.27e-07 | 1 |
genital ridge | 8.27e-07 | 1 |
primitive sex cord of indifferent gonad | 8.27e-07 | 1 |
coelomic epithelium | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.26e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.