FFCP PHASE1:Hg19::chrX:152770174..152770191,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=633|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1044|TSSclassifier=S|UniProt=B4DQD6|association_with_transcript=29bp_to_AK298756_5end|coexpression_cluster_id=C288|description=CAGE_peak_27_at_BGN_5end|id=chrX:152770174..152770191,+|ontology_enrichment_celltype=CL:0000055!1.54e-18!180;CL:0000057!5.05e-13!75;CL:0000183!3.10e-10!59;CL:0000187!1.99e-09!54;CL:0000680!5.87e-09!57;CL:0000056!5.87e-09!57;CL:0000355!5.87e-09!57;CL:0002334!6.72e-09!12;CL:0000327!1.12e-08!14;CL:0000359!1.33e-08!32;CL:0000393!5.72e-08!60;CL:0000211!5.72e-08!60;CL:0000222!2.76e-07!119;CL:0000499!5.32e-07!27;CL:0000192!8.33e-07!42;CL:0000514!8.33e-07!42|ontology_enrichment_celltype_v019=CL:0000327;3.49e-15;15!CL:0000499;1.33e-12;28!CL:0000138;4.18e-11;6!CL:0000153;5.02e-10;9!CL:0000447;5.02e-10;9!CL:0000135;1.07e-08;3!CL:0000388;1.07e-08;3!CL:0000197;1.41e-07;6!CL:0000098;1.41e-07;6!CL:0002167;1.41e-07;6!CL:0002575;8.02e-07;2|ontology_enrichment_celltype_v019_2=CL:0000327,3.17e-15,15;CL:0000499,1.26e-12,28;CL:0000058,5.87e-11,6;CL:0000138,5.87e-11,6;CL:0000153,5.55e-10,9;CL:0000447,5.55e-10,9;CL:0000057,2.58e-09,76;CL:0000135,1.09e-08,3;CL:0000388,1.09e-08,3;CL:0000197,9.91e-08,6;CL:0000098,9.91e-08,6;CL:0002167,9.91e-08,6;CL:0002575,8.53e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!1.08e-15!84;UBERON:0001009!4.01e-14!113;UBERON:0002049!6.85e-14!79;UBERON:0007798!6.85e-14!79;UBERON:0004535!5.04e-13!110;UBERON:0000055!7.83e-13!69;UBERON:0001981!4.59e-12!60;UBERON:0007500!4.59e-12!60;UBERON:0004537!4.59e-12!60;UBERON:0006965!4.59e-12!60;UBERON:0001637!3.82e-11!42;UBERON:0003509!3.82e-11!42;UBERON:0004572!3.82e-11!42;UBERON:0003914!1.26e-10!118;UBERON:0000025!7.93e-09!194;UBERON:0000477!1.77e-08!286;UBERON:0007100!2.80e-08!27;UBERON:0002385!2.92e-08!63;UBERON:0001015!2.92e-08!63;UBERON:0000383!2.92e-08!63;UBERON:0004111!6.21e-08!241;UBERON:0001134!1.09e-07!61;UBERON:0002036!1.09e-07!61;UBERON:0003082!1.09e-07!61;UBERON:0004573!1.22e-07!33;UBERON:0004571!1.22e-07!33;UBERON:0000947!1.63e-07!21;UBERON:0010191!1.63e-07!21;UBERON:0000914!3.02e-07!83;UBERON:0002329!3.02e-07!83;UBERON:0003077!3.02e-07!83;UBERON:0003059!3.02e-07!83;UBERON:0007282!3.02e-07!83;UBERON:0009618!3.02e-07!83;UBERON:0007285!3.02e-07!83;UBERON:0000948!5.24e-07!24;UBERON:0005498!5.24e-07!24;UBERON:0004140!5.24e-07!24;UBERON:0009881!5.24e-07!24;UBERON:0004141!5.24e-07!24;UBERON:0003084!5.24e-07!24;UBERON:0007005!5.24e-07!24;UBERON:0004139!5.24e-07!24;UBERON:0004291!5.24e-07!24;UBERON:0004290!6.48e-07!70|ontology_enrichment_uberon_v019=UBERON:0007846;1.07e-08;3!UBERON:0000043;1.07e-08;3!UBERON:0007845;1.07e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-08,3;UBERON:0000043,1.09e-08,3;UBERON:0007845,1.09e-08,3;UBERON:0004872,2.23e-07,83;UBERON:0000948,3.90e-07,24;UBERON:0005498,3.90e-07,24;UBERON:0004140,3.90e-07,24;UBERON:0009881,3.90e-07,24;UBERON:0004141,3.90e-07,24;UBERON:0003084,3.90e-07,24;UBERON:0007005,3.90e-07,24;UBERON:0004139,3.90e-07,24;UBERON:0004291,3.90e-07,24|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,1.34088328328186,0,0,0,0,0,0,0,0,0.495065411840187,0.994192127183747,1.34465029290355,1.20538905604795,0.730310090387373,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,2.1686349143074,1.00267582127178,1.59331170856906,9.54343136461319,8.75942766544745,0,0,0.263504357079378,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0.825354125820202,0.417989933073621,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0.549605231791222,0,0,0,4.47274756525787,1.77282716330412,0,5.44989579422746,0.354668382198357,0,3.20246987189115,2.22000793575444,0,1.0776853765575,0.980771418680752,2.11900398702904,2.30470369792,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0,0,0,0,0.30648779579902,0.45071417671979,0.340296549480063,0.717558542755448,0,1.05965950579781,1.50045548042201,0.824420233907511,0.257640540045629,0.37223371266318,2.19409231913646,1.26668106709558,0.504867548488229,0.276149695926898,0.969876340912871,0.355009592516614,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.433099343283221,0.925971025153221,2.28304982681518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,1.30788020649984,0.95339771567235,0.517086863031111,3.57656445851882,1.690605505112,0.26593811658487,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1044 | |||
|TSSclassifier=S | |||
|UniProt=B4DQD6 | |||
|association_with_transcript=29bp_to_AK298756_5end | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_27_at_BGN_5end | |||
|id=chrX:152770174..152770191,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.54e-18!180;CL:0000057!5.05e-13!75;CL:0000183!3.10e-10!59;CL:0000187!1.99e-09!54;CL:0000680!5.87e-09!57;CL:0000056!5.87e-09!57;CL:0000355!5.87e-09!57;CL:0002334!6.72e-09!12;CL:0000327!1.12e-08!14;CL:0000359!1.33e-08!32;CL:0000393!5.72e-08!60;CL:0000211!5.72e-08!60;CL:0000222!2.76e-07!119;CL:0000499!5.32e-07!27;CL:0000192!8.33e-07!42;CL:0000514!8.33e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000327;3.49e-15;15!CL:0000499;1.33e-12;28!CL:0000138;4.18e-11;6!CL:0000153;5.02e-10;9!CL:0000447;5.02e-10;9!CL:0000135;1.07e-08;3!CL:0000388;1.07e-08;3!CL:0000197;1.41e-07;6!CL:0000098;1.41e-07;6!CL:0002167;1.41e-07;6!CL:0002575;8.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000327,3.17e-15,15;CL:0000499,1.26e-12,28;CL:0000058,5.87e-11,6;CL:0000138,5.87e-11,6;CL:0000153,5.55e-10,9;CL:0000447,5.55e-10,9;CL:0000057,2.58e-09,76;CL:0000135,1.09e-08,3;CL:0000388,1.09e-08,3;CL:0000197,9.91e-08,6;CL:0000098,9.91e-08,6;CL:0002167,9.91e-08,6;CL:0002575,8.53e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.08e-15!84;UBERON:0001009!4.01e-14!113;UBERON:0002049!6.85e-14!79;UBERON:0007798!6.85e-14!79;UBERON:0004535!5.04e-13!110;UBERON:0000055!7.83e-13!69;UBERON:0001981!4.59e-12!60;UBERON:0007500!4.59e-12!60;UBERON:0004537!4.59e-12!60;UBERON:0006965!4.59e-12!60;UBERON:0001637!3.82e-11!42;UBERON:0003509!3.82e-11!42;UBERON:0004572!3.82e-11!42;UBERON:0003914!1.26e-10!118;UBERON:0000025!7.93e-09!194;UBERON:0000477!1.77e-08!286;UBERON:0007100!2.80e-08!27;UBERON:0002385!2.92e-08!63;UBERON:0001015!2.92e-08!63;UBERON:0000383!2.92e-08!63;UBERON:0004111!6.21e-08!241;UBERON:0001134!1.09e-07!61;UBERON:0002036!1.09e-07!61;UBERON:0003082!1.09e-07!61;UBERON:0004573!1.22e-07!33;UBERON:0004571!1.22e-07!33;UBERON:0000947!1.63e-07!21;UBERON:0010191!1.63e-07!21;UBERON:0000914!3.02e-07!83;UBERON:0002329!3.02e-07!83;UBERON:0003077!3.02e-07!83;UBERON:0003059!3.02e-07!83;UBERON:0007282!3.02e-07!83;UBERON:0009618!3.02e-07!83;UBERON:0007285!3.02e-07!83;UBERON:0000948!5.24e-07!24;UBERON:0005498!5.24e-07!24;UBERON:0004140!5.24e-07!24;UBERON:0009881!5.24e-07!24;UBERON:0004141!5.24e-07!24;UBERON:0003084!5.24e-07!24;UBERON:0007005!5.24e-07!24;UBERON:0004139!5.24e-07!24;UBERON:0004291!5.24e-07!24;UBERON:0004290!6.48e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.07e-08;3!UBERON:0000043;1.07e-08;3!UBERON:0007845;1.07e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-08,3;UBERON:0000043,1.09e-08,3;UBERON:0007845,1.09e-08,3;UBERON:0004872,2.23e-07,83;UBERON:0000948,3.90e-07,24;UBERON:0005498,3.90e-07,24;UBERON:0004140,3.90e-07,24;UBERON:0009881,3.90e-07,24;UBERON:0004141,3.90e-07,24;UBERON:0003084,3.90e-07,24;UBERON:0007005,3.90e-07,24;UBERON:0004139,3.90e-07,24;UBERON:0004291,3.90e-07,24 | |||
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| |||
|short_description=p27@BGN | |||
}} |
Revision as of 11:15, 14 September 2013
Short description: | p27@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_27_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 29bp_to_AK298756_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | B4DQD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 3.17e-15 | 15 |
stromal cell | 1.26e-12 | 28 |
chondroblast | 5.87e-11 | 6 |
chondrocyte | 5.87e-11 | 6 |
GAG secreting cell | 5.55e-10 | 9 |
carbohydrate secreting cell | 5.55e-10 | 9 |
fibroblast | 2.58e-09 | 76 |
fibrocyte | 1.09e-08 | 3 |
tendon cell | 1.09e-08 | 3 |
receptor cell | 9.91e-08 | 6 |
sensory epithelial cell | 9.91e-08 | 6 |
olfactory epithelial cell | 9.91e-08 | 6 |
central nervous system pericyte | 8.53e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.09e-08 | 3 |
tendon | 1.09e-08 | 3 |
regular connective tissue | 1.09e-08 | 3 |
splanchnic layer of lateral plate mesoderm | 2.23e-07 | 83 |
heart | 3.90e-07 | 24 |
primitive heart tube | 3.90e-07 | 24 |
primary heart field | 3.90e-07 | 24 |
anterior lateral plate mesoderm | 3.90e-07 | 24 |
heart tube | 3.90e-07 | 24 |
heart primordium | 3.90e-07 | 24 |
cardiac mesoderm | 3.90e-07 | 24 |
cardiogenic plate | 3.90e-07 | 24 |
heart rudiment | 3.90e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.