FFCP PHASE1:Hg19::chrX:152770265..152770294,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=633|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=1044|TSSclassifier=S|UniProt=B4DQD6|association_with_transcript=120bp_to_AK298756_5end|coexpression_cluster_id=C288|description=CAGE_peak_15_at_BGN_5end|id=chrX:152770265..152770294,+|ontology_enrichment_celltype=CL:0000055!2.18e-19!180;CL:0000057!4.15e-13!75;CL:0000183!2.18e-09!59;CL:0000187!7.49e-09!54;CL:0000359!1.31e-08!32;CL:0000680!3.57e-08!57;CL:0000056!3.57e-08!57;CL:0000355!3.57e-08!57;CL:0000393!1.03e-07!60;CL:0000211!1.03e-07!60;CL:0000192!3.32e-07!42;CL:0000514!3.32e-07!42;CL:0000222!8.07e-07!119|ontology_enrichment_celltype_v019=CL:0000327;2.04e-10;15!CL:0002494;1.13e-08;16!CL:0000499;2.33e-08;28|ontology_enrichment_celltype_v019_2=CL:0000057,2.82e-16,76;CL:0000327,1.28e-10,15;CL:0002494,1.07e-08,16;CL:0000499,1.46e-08,28;CL:0000048,9.51e-07,427|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!6.00e-16!84;UBERON:0000055!5.30e-13!69;UBERON:0002049!6.96e-13!79;UBERON:0007798!6.96e-13!79;UBERON:0001981!1.64e-12!60;UBERON:0007500!1.64e-12!60;UBERON:0004537!1.64e-12!60;UBERON:0006965!1.64e-12!60;UBERON:0001009!1.77e-12!113;UBERON:0000477!6.25e-12!286;UBERON:0004535!1.06e-11!110;UBERON:0004111!1.75e-11!241;UBERON:0003914!4.00e-11!118;UBERON:0007100!6.84e-11!27;UBERON:0001637!9.49e-11!42;UBERON:0003509!9.49e-11!42;UBERON:0004572!9.49e-11!42;UBERON:0000025!1.09e-10!194;UBERON:0000948!4.94e-10!24;UBERON:0005498!4.94e-10!24;UBERON:0004140!4.94e-10!24;UBERON:0009881!4.94e-10!24;UBERON:0004141!4.94e-10!24;UBERON:0003084!4.94e-10!24;UBERON:0007005!4.94e-10!24;UBERON:0004139!4.94e-10!24;UBERON:0004291!4.94e-10!24;UBERON:0001134!9.25e-09!61;UBERON:0002036!9.25e-09!61;UBERON:0003082!9.25e-09!61;UBERON:0000914!1.01e-08!83;UBERON:0002329!1.01e-08!83;UBERON:0003077!1.01e-08!83;UBERON:0003059!1.01e-08!83;UBERON:0007282!1.01e-08!83;UBERON:0009618!1.01e-08!83;UBERON:0007285!1.01e-08!83;UBERON:0004573!1.36e-08!33;UBERON:0004571!1.36e-08!33;UBERON:0002385!1.64e-08!63;UBERON:0001015!1.64e-08!63;UBERON:0000383!1.64e-08!63;UBERON:0000475!9.64e-08!365;UBERON:0004290!1.14e-07!70;UBERON:0007023!5.53e-07!115|ontology_enrichment_uberon_v019=UBERON:0000948;5.42e-11;22!UBERON:0007100;2.51e-10;25|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.62e-11,24;UBERON:0005498,2.62e-11,24;UBERON:0004140,2.62e-11,24;UBERON:0009881,2.62e-11,24;UBERON:0004141,2.62e-11,24;UBERON:0003084,2.62e-11,24;UBERON:0007005,2.62e-11,24;UBERON:0004139,2.62e-11,24;UBERON:0004291,2.62e-11,24;UBERON:0007100,9.07e-11,27;UBERON:0004872,1.28e-10,83;UBERON:0003914,2.04e-10,117;UBERON:0001009,7.91e-09,112;UBERON:0004535,9.21e-09,109;UBERON:0002049,2.24e-07,78;UBERON:0007798,2.24e-07,78;UBERON:0007500,3.18e-07,59;UBERON:0001981,3.18e-07,59;UBERON:0004537,3.18e-07,59;UBERON:0006965,3.18e-07,59;UBERON:0004797,4.26e-07,7|phase1_expression=0.54503513781167,1.07050261945492,0.563817616383885,3.00219895059391,1.34088328328186,3.48935409640147,0,0.631719873426831,0,0,0,0,0,0.990130823680373,2.31978163009541,4.03395087871065,1.80808358407193,0.730310090387373,0.975865597581014,0,1.63200552995402,0.313454721478088,0,0.136874425072884,0.627713197974014,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.80719576192283,3.00802746381534,4.77993512570718,15.1104329939709,24.3317435151318,0,0,0.087834785693126,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.835979866147242,0,0,1.33888245105868,0,0,2.19655851793353,0,3.24056779152704,0.535798369704479,0.22452937262617,0.450445921933289,3.06633274931766,0,0.732806975721629,0,0,0,5.96366342034382,6.33152558322899,0.264818361626438,12.333974692199,2.83734705758686,4.48542080113846,2.1349799145941,3.94668077467456,0,2.96363478553314,2.61539044981534,6.20565453344219,11.5235184896,0.468642863667593,0,0,0.298897361103602,0,0,0,0,0.368502951935304,0.103325781175765,0,2.71993622206413,0.910161361938026,0.718618141816238,0,1.00094815897571,0,2.19488810440419,1.22595118319608,1.20190447125277,0.680593098960126,2.15267562826634,0.427114777637135,0.847727604638247,3.00091096084402,1.8549455262919,2.31876486041066,0.930584281657949,2.86919764810153,3.11798416515836,2.27190396819703,1.10459878370759,1.77810662500693,4.26011511019937,1.30977727695932,1.18692414617341,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,2.94017422771084,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0.866198686566443,0.462985512576611,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14885012077835,1.74384027533312,3.15354629030085,0.904902010304444,3.57656445851882,0.845302752556,0.26593811658487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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1044 | |||
|TSSclassifier=S | |||
|UniProt=B4DQD6 | |||
|association_with_transcript=120bp_to_AK298756_5end | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_15_at_BGN_5end | |||
|id=chrX:152770265..152770294,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.18e-19!180;CL:0000057!4.15e-13!75;CL:0000183!2.18e-09!59;CL:0000187!7.49e-09!54;CL:0000359!1.31e-08!32;CL:0000680!3.57e-08!57;CL:0000056!3.57e-08!57;CL:0000355!3.57e-08!57;CL:0000393!1.03e-07!60;CL:0000211!1.03e-07!60;CL:0000192!3.32e-07!42;CL:0000514!3.32e-07!42;CL:0000222!8.07e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000327;2.04e-10;15!CL:0002494;1.13e-08;16!CL:0000499;2.33e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.82e-16,76;CL:0000327,1.28e-10,15;CL:0002494,1.07e-08,16;CL:0000499,1.46e-08,28;CL:0000048,9.51e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!6.00e-16!84;UBERON:0000055!5.30e-13!69;UBERON:0002049!6.96e-13!79;UBERON:0007798!6.96e-13!79;UBERON:0001981!1.64e-12!60;UBERON:0007500!1.64e-12!60;UBERON:0004537!1.64e-12!60;UBERON:0006965!1.64e-12!60;UBERON:0001009!1.77e-12!113;UBERON:0000477!6.25e-12!286;UBERON:0004535!1.06e-11!110;UBERON:0004111!1.75e-11!241;UBERON:0003914!4.00e-11!118;UBERON:0007100!6.84e-11!27;UBERON:0001637!9.49e-11!42;UBERON:0003509!9.49e-11!42;UBERON:0004572!9.49e-11!42;UBERON:0000025!1.09e-10!194;UBERON:0000948!4.94e-10!24;UBERON:0005498!4.94e-10!24;UBERON:0004140!4.94e-10!24;UBERON:0009881!4.94e-10!24;UBERON:0004141!4.94e-10!24;UBERON:0003084!4.94e-10!24;UBERON:0007005!4.94e-10!24;UBERON:0004139!4.94e-10!24;UBERON:0004291!4.94e-10!24;UBERON:0001134!9.25e-09!61;UBERON:0002036!9.25e-09!61;UBERON:0003082!9.25e-09!61;UBERON:0000914!1.01e-08!83;UBERON:0002329!1.01e-08!83;UBERON:0003077!1.01e-08!83;UBERON:0003059!1.01e-08!83;UBERON:0007282!1.01e-08!83;UBERON:0009618!1.01e-08!83;UBERON:0007285!1.01e-08!83;UBERON:0004573!1.36e-08!33;UBERON:0004571!1.36e-08!33;UBERON:0002385!1.64e-08!63;UBERON:0001015!1.64e-08!63;UBERON:0000383!1.64e-08!63;UBERON:0000475!9.64e-08!365;UBERON:0004290!1.14e-07!70;UBERON:0007023!5.53e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;5.42e-11;22!UBERON:0007100;2.51e-10;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,2.62e-11,24;UBERON:0005498,2.62e-11,24;UBERON:0004140,2.62e-11,24;UBERON:0009881,2.62e-11,24;UBERON:0004141,2.62e-11,24;UBERON:0003084,2.62e-11,24;UBERON:0007005,2.62e-11,24;UBERON:0004139,2.62e-11,24;UBERON:0004291,2.62e-11,24;UBERON:0007100,9.07e-11,27;UBERON:0004872,1.28e-10,83;UBERON:0003914,2.04e-10,117;UBERON:0001009,7.91e-09,112;UBERON:0004535,9.21e-09,109;UBERON:0002049,2.24e-07,78;UBERON:0007798,2.24e-07,78;UBERON:0007500,3.18e-07,59;UBERON:0001981,3.18e-07,59;UBERON:0004537,3.18e-07,59;UBERON:0006965,3.18e-07,59;UBERON:0004797,4.26e-07,7 | |||
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| |||
|short_description=p15@BGN | |||
}} |
Revision as of 11:15, 14 September 2013
Short description: | p15@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | 120bp_to_AK298756_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | B4DQD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.82e-16 | 76 |
extracellular matrix secreting cell | 1.28e-10 | 15 |
cardiocyte | 1.07e-08 | 16 |
stromal cell | 1.46e-08 | 28 |
multi fate stem cell | 9.51e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
heart | 2.62e-11 | 24 |
primitive heart tube | 2.62e-11 | 24 |
primary heart field | 2.62e-11 | 24 |
anterior lateral plate mesoderm | 2.62e-11 | 24 |
heart tube | 2.62e-11 | 24 |
heart primordium | 2.62e-11 | 24 |
cardiac mesoderm | 2.62e-11 | 24 |
cardiogenic plate | 2.62e-11 | 24 |
heart rudiment | 2.62e-11 | 24 |
primary circulatory organ | 9.07e-11 | 27 |
splanchnic layer of lateral plate mesoderm | 1.28e-10 | 83 |
epithelial tube | 2.04e-10 | 117 |
circulatory system | 7.91e-09 | 112 |
cardiovascular system | 9.21e-09 | 109 |
vasculature | 2.24e-07 | 78 |
vascular system | 2.24e-07 | 78 |
epithelial tube open at both ends | 3.18e-07 | 59 |
blood vessel | 3.18e-07 | 59 |
blood vasculature | 3.18e-07 | 59 |
vascular cord | 3.18e-07 | 59 |
blood vessel layer | 4.26e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.