FFCP PHASE1:Mm9::chr7:123586926..123586950,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18704|HGNC=|MCL_coexpression_id=24|UniProt=F8VPL2,Q61194,Q3UQN0,Q3US21|association_with_transcript=21bp_to_ENSMUST00000170430,NM_011083,uc009jjg.1,uc009jjh.1,uc009jji.1,uc012fso.1_5end|description=CAGE_peak_1_at_Pik3c2a_5end|id=chr7:123586926..123586950,-|ontology_enrichment_celltype=CL:0000066!2.38e-08!25;CL:0002076!5.13e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-08,25;CL:0002076,5.13e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.84e-17!43;UBERON:0005409!9.12e-14!59;UBERON:0004119!3.25e-11!130;UBERON:0000925!3.25e-11!130;UBERON:0006595!3.25e-11!130;UBERON:0001007!9.39e-11!128;UBERON:0001555!9.39e-11!128;UBERON:0007026!9.39e-11!128;UBERON:0004921!5.67e-10!126;UBERON:0004185!5.67e-10!126;UBERON:0000344!2.23e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.03e-14,31;UBERON:0005409,5.17e-11,47;UBERON:0004119,1.51e-08,118;UBERON:0000925,1.51e-08,118;UBERON:0006595,1.51e-08,118;UBERON:0001007,3.82e-08,116;UBERON:0001555,3.82e-08,116;UBERON:0007026,3.82e-08,116;UBERON:0004921,1.82e-07,114;UBERON:0000344,2.23e-07,15|phase1_expression=31.5493228796444,266.268236028833,251.614579382413,221.101338465293,190.340377379612,65.6407953175489,60.7392865548367,45.5805331748764,34.7748143714617,46.5788407380767,14.5535272991679,16.5128369120346,30.6449306576858,34.356218150666,10.6595123781012,11.7435655086099,1.39912375625629,24.6060488979425,29.6167176588396,22.0682618934976,29.1698485218169,9.03547655928056,12.7987896678078,62.8770221578088,69.9698307254869,169.398429413931,138.274600767063,123.249545096329,45.4155972500734,45.8694836163074,60.9758904302088,13.3356441426523,11.6862309641068,0,34.3733427504017,32.5819904902645,41.6505486775233,79.5210098400125,45.3174499823804,58.6346593250654,97.6464270131484,67.6215030108861,48.0655249500842,36.2582835769663,37.1039568263423,46.6208750490671,14.0830441982647,7.19483016055474,2.85592037554813,12.0546537426056,5.31948402176378,4.31257693094915,37.9188689690484,42.071004236658,37.9785993030984,52.9954438234051,33.8109459127733,35.5813743671435,4.45096213891115,3.70293685490423,7.60597684207415,9.82649143000483,7.11435836888911,8.99899717281399,4.94433181283487,8.5257613793532,3.89480143673926,6.14749288514487,7.56934169851887,2.97013064329719,2.94454945891935,5.71301968807607,7.50953039235486,6.24703075996266,5.07980996396653,2.75765635983006,19.82085857989,17.7485399938411,25.1914714540239,5.14356522147756,4.94033275453012,7.8137005583514,8.93385596804419,15.757353080887,18.6413862287708,19.7401152267357,15.8032565687004,8.38797506213853,28.6245010799436,31.8156268049567,73.6255801302262,24.9522924324602,15.6393406752783,21.5881276655127,45.4843492213368,61.8277104194323,22.1902183808168,23.1785238706159,15.3273742715693,13.7802434059033,34.9291681046168,55.1803852881567,35.6727335589304,85.3280043783997,52.3908319247138,62.3265269068743,58.6408356217149,45.9019196470621,50.4928873111985,24.6413950847609,18.9099006175088,22.5304453950985,19.1410862722529,24.5677904100775,31.6313622195046,17.7189893774842,84.7878739328902,29.2090700978222,20.3460426948471,20.0590893934787,17.8881629952919,23.2740121504907,89.4680453846986,23.1296829639122,30.9981126083913,80.7244294459149,8.02761334189666,6.59893004092748,5.08280908292259,24.1162929441765,21.5025283324754,12.6910895633993,21.5542157038423,17.3886510984625,17.6619837875626,26.2830846169767,33.9125081621553,35.8292075357068,62.6752440915513,30.5140691035387,30.0578223243846,21.8406999211799,28.2697543794398,27.8803912996073,29.3917676333736,29.2099282249457,22.9569225171336,31.5618112301599,21.5567992932842,34.0390944302075,27.8002776179039,18.8508329887714,39.4827093900349,45.969285980926,40.127516599549,33.6367910923253,7.72434506044558,4.11756651383544,4.83077948972507,24.4408411591892,28.8467053776748,23.5881300513929,29.3563472125661,32.0725697748268,24.3742038362058,27.2064715357977,23.8763327245661,26.0386713478788,21.7219001885794,23.4759473633106,25.6177438164904,23.3919979880532,17.124908992702,22.4124719329821,17.4540657308226,17.8024979416162,161.905203662061,91.4998960655863,31.1400845781442,34.1387907634845,42.9128646202571,61.3117914854961,68.9371935919098,70.9541585399846,78.7718242163889,87.4551449584498,83.4432893216895,95.4991065797524,85.979162419532,70.1079138750293,60.7347920147891,83.6393347668342,9.48339504765408,36.1025299846743,37.1935527721165,45.0069434538145,44.8030245357215,48.0430366248682,54.3834219268613,76.6096668014135,74.574395724653,82.5527026636846,57.2153570278197,10.1775514486817,13.3660116676978,12.5922782935518,15.2145091041377,16.1588697034119,26.7357144370491,26.1803485080238,45.3978634970099,21.4157902286704,28.7536413054709,25.6777253891267,32.1398803307997,28.7939920859707,32.8297266745099,41.9725863586129,37.6896507939874,31.4555743539005,35.2004349114776,33.9490171550376,35.6729177398523,41.2065393306867,46.6565536136587,48.0028773730185,55.8028410135916,46.28612013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| ||
|EntrezGene=18704 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=F8VPL2,Q61194,Q3UQN0,Q3US21 | |||
|association_with_transcript=21bp_to_ENSMUST00000170430,NM_011083,uc009jjg.1,uc009jjh.1,uc009jji.1,uc012fso.1_5end | |||
|description=CAGE_peak_1_at_Pik3c2a_5end | |||
|id=chr7:123586926..123586950,- | |||
|ontology_enrichment_celltype=CL:0000066!2.38e-08!25;CL:0002076!5.13e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.38e-08,25;CL:0002076,5.13e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.84e-17!43;UBERON:0005409!9.12e-14!59;UBERON:0004119!3.25e-11!130;UBERON:0000925!3.25e-11!130;UBERON:0006595!3.25e-11!130;UBERON:0001007!9.39e-11!128;UBERON:0001555!9.39e-11!128;UBERON:0007026!9.39e-11!128;UBERON:0004921!5.67e-10!126;UBERON:0004185!5.67e-10!126;UBERON:0000344!2.23e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.03e-14,31;UBERON:0005409,5.17e-11,47;UBERON:0004119,1.51e-08,118;UBERON:0000925,1.51e-08,118;UBERON:0006595,1.51e-08,118;UBERON:0001007,3.82e-08,116;UBERON:0001555,3.82e-08,116;UBERON:0007026,3.82e-08,116;UBERON:0004921,1.82e-07,114;UBERON:0000344,2.23e-07,15 | |||
|phase1_expression=31.5493228796444,266.268236028833,251.614579382413,221.101338465293,190.340377379612,65.6407953175489,60.7392865548367,45.5805331748764,34.7748143714617,46.5788407380767,14.5535272991679,16.5128369120346,30.6449306576858,34.356218150666,10.6595123781012,11.7435655086099,1.39912375625629,24.6060488979425,29.6167176588396,22.0682618934976,29.1698485218169,9.03547655928056,12.7987896678078,62.8770221578088,69.9698307254869,169.398429413931,138.274600767063,123.249545096329,45.4155972500734,45.8694836163074,60.9758904302088,13.3356441426523,11.6862309641068,0,34.3733427504017,32.5819904902645,41.6505486775233,79.5210098400125,45.3174499823804,58.6346593250654,97.6464270131484,67.6215030108861,48.0655249500842,36.2582835769663,37.1039568263423,46.6208750490671,14.0830441982647,7.19483016055474,2.85592037554813,12.0546537426056,5.31948402176378,4.31257693094915,37.9188689690484,42.071004236658,37.9785993030984,52.9954438234051,33.8109459127733,35.5813743671435,4.45096213891115,3.70293685490423,7.60597684207415,9.82649143000483,7.11435836888911,8.99899717281399,4.94433181283487,8.5257613793532,3.89480143673926,6.14749288514487,7.56934169851887,2.97013064329719,2.94454945891935,5.71301968807607,7.50953039235486,6.24703075996266,5.07980996396653,2.75765635983006,19.82085857989,17.7485399938411,25.1914714540239,5.14356522147756,4.94033275453012,7.8137005583514,8.93385596804419,15.757353080887,18.6413862287708,19.7401152267357,15.8032565687004,8.38797506213853,28.6245010799436,31.8156268049567,73.6255801302262,24.9522924324602,15.6393406752783,21.5881276655127,45.4843492213368,61.8277104194323,22.1902183808168,23.1785238706159,15.3273742715693,13.7802434059033,34.9291681046168,55.1803852881567,35.6727335589304,85.3280043783997,52.3908319247138,62.3265269068743,58.6408356217149,45.9019196470621,50.4928873111985,24.6413950847609,18.9099006175088,22.5304453950985,19.1410862722529,24.5677904100775,31.6313622195046,17.7189893774842,84.7878739328902,29.2090700978222,20.3460426948471,20.0590893934787,17.8881629952919,23.2740121504907,89.4680453846986,23.1296829639122,30.9981126083913,80.7244294459149,8.02761334189666,6.59893004092748,5.08280908292259,24.1162929441765,21.5025283324754,12.6910895633993,21.5542157038423,17.3886510984625,17.6619837875626,26.2830846169767,33.9125081621553,35.8292075357068,62.6752440915513,30.5140691035387,30.0578223243846,21.8406999211799,28.2697543794398,27.8803912996073,29.3917676333736,29.2099282249457,22.9569225171336,31.5618112301599,21.5567992932842,34.0390944302075,27.8002776179039,18.8508329887714,39.4827093900349,45.969285980926,40.127516599549,33.6367910923253,7.72434506044558,4.11756651383544,4.83077948972507,24.4408411591892,28.8467053776748,23.5881300513929,29.3563472125661,32.0725697748268,24.3742038362058,27.2064715357977,23.8763327245661,26.0386713478788,21.7219001885794,23.4759473633106,25.6177438164904,23.3919979880532,17.124908992702,22.4124719329821,17.4540657308226,17.8024979416162,161.905203662061,91.4998960655863,31.1400845781442,34.1387907634845,42.9128646202571,61.3117914854961,68.9371935919098,70.9541585399846,78.7718242163889,87.4551449584498,83.4432893216895,95.4991065797524,85.979162419532,70.1079138750293,60.7347920147891,83.6393347668342,9.48339504765408,36.1025299846743,37.1935527721165,45.0069434538145,44.8030245357215,48.0430366248682,54.3834219268613,76.6096668014135,74.574395724653,82.5527026636846,57.2153570278197,10.1775514486817,13.3660116676978,12.5922782935518,15.2145091041377,16.1588697034119,26.7357144370491,26.1803485080238,45.3978634970099,21.4157902286704,28.7536413054709,25.6777253891267,32.1398803307997,28.7939920859707,32.8297266745099,41.9725863586129,37.6896507939874,31.4555743539005,35.2004349114776,33.9490171550376,35.6729177398523,41.2065393306867,46.6565536136587,48.0028773730185,55.8028410135916,46.286120136594,45.4446090673838,43.5876417143863,41.6170806296808,44.2626119259425,40.7136466636035,27.7391898747542,44.7505488447323,37.8033342437484,24.0825884981688,28.9512865882742,27.5410708232815,12.6235463602186,34.7059041357882,35.9203644752907,29.2975820916607,26.5255365727333,31.4146130456176,31.4214949175604,36.8377738524154,28.0565623594859,35.1806122372406,13.8168166061377,33.9236803647762,17.2723635557238,27.2021222120472,43.8820527106944,49.1157011857862,29.1336763385978,26.9067965698628,57.5245493255489,26.2818684663888,53.8011508901873,78.5622011231392,49.0770534794632,44.9186696764749,56.2545429125752,53.7634903732494,64.9753922463577,36.4270378156553,36.1922799002934,6.98536892426874,27.2208034490122,39.3695318685847,28.1822731811271,30.9352158731987,12.4830629136986,40.8328772030856,42.366414172764,29.7713337374199,30.5039567941738,39.397320113801,31.8452243620663,31.8724158488374,37.9165478411091,93.2738677215522,23.1781627513137,13.6696704638282,27.4494534391086,23.149315921214,12.9974235333237,12.8492574057764,13.2691340459783,11.2185763795945,14.2750481370131,14.2345973018557,20.0480829783174,31.00092737095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| |||
|short_description=p1@Pik3c2a | |||
}} | |||
Revision as of 11:34, 14 September 2013
| Short description: | p1@Pik3c2a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Pik3c2a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:24 |
| Association with transcript: | 21bp_to_ENSMUST00000170430, NM_011083, uc009jjg.1, uc009jjh.1, uc009jji.1, uc012fso.1_5end |
| EntrezGene: | Pik3c2a |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.38e-08 | 25 |
| endo-epithelial cell | 5.13e-07 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.03e-14 | 31 |
| gastrointestinal system | 5.17e-11 | 47 |
| endoderm-derived structure | 1.51e-08 | 118 |
| endoderm | 1.51e-08 | 118 |
| presumptive endoderm | 1.51e-08 | 118 |
| digestive system | 3.82e-08 | 116 |
| digestive tract | 3.82e-08 | 116 |
| primitive gut | 3.82e-08 | 116 |
| subdivision of digestive tract | 1.82e-07 | 114 |
| mucosa | 2.23e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
