FFCP PHASE1:Hg19::chrX:35711783..35711785,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C117|description=CAGE_peak_at_chrX:35711783..35711785,+|id=chrX:35711783..35711785,+|ontology_enrichment_celltype=CL:0000313!3.08e-14!1;CL:0000159!9.25e-08!2|ontology_enrichment_celltype_v019=CL:0000313;5.42e-195;1!CL:0000159;1.55e-98;2|ontology_enrichment_celltype_v019_2=CL:0000313,5.42e-195,1;CL:0000159,1.55e-98,2;CL:0000151,5.81e-07,36|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10|ontology_enrichment_disease=DOID:2152!3.08e-14!1;DOID:4468!1.05e-07!2|ontology_enrichment_disease_v019=DOID:2152;5.42e-195;1!DOID:2394;1.43e-15;14!DOID:299;2.15e-09;25!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29|ontology_enrichment_disease_v019_2=DOID:2152,5.42e-195,1;DOID:2394,1.43e-15,14;DOID:299,2.15e-09,25;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29|ontology_enrichment_uberon=UBERON:0006947!9.94e-18!3;UBERON:0004054!9.94e-18!3;UBERON:0004911!3.08e-14!1;UBERON:0001000!4.53e-14!1;UBERON:0005352!4.53e-14!1;UBERON:0001301!8.58e-14!1;UBERON:0002038!9.73e-14!1;UBERON:0009661!9.73e-14!1;UBERON:0006834!1.25e-13!1;UBERON:0005904!1.52e-13!4;UBERON:0003133!4.78e-09!48;UBERON:0004175!2.94e-08!25;UBERON:0004909!9.25e-08!2;UBERON:0001876!9.87e-08!2;UBERON:0002113!1.29e-07!27;UBERON:0003918!1.29e-07!27;UBERON:0005095!1.29e-07!27;UBERON:0007687!1.29e-07!27;UBERON:0002950!1.64e-07!2;UBERON:0001891!1.64e-07!2;UBERON:0009616!1.64e-07!2;UBERON:0005156!2.73e-07!59;UBERON:0000990!2.73e-07!59|ontology_enrichment_uberon_v019=UBERON:0004911;5.42e-195;1!UBERON:0004909;1.55e-98;2!UBERON:0000992;1.21e-16;13!UBERON:0000991;6.74e-11;21!UBERON:0000474;2.32e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.42e-195,1;UBERON:0004909,1.55e-98,2;UBERON:0000992,1.21e-16,13;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67783147696688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chrX:35711783..35711785,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chrX:35711783..35711785,+ | |||
|id=chrX:35711783..35711785,+ | |||
|ontology_enrichment_celltype=CL:0000313!3.08e-14!1;CL:0000159!9.25e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.42e-195;1!CL:0000159;1.55e-98;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,5.42e-195,1;CL:0000159,1.55e-98,2;CL:0000151,5.81e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease=DOID:2152!3.08e-14!1;DOID:4468!1.05e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;5.42e-195;1!DOID:2394;1.43e-15;14!DOID:299;2.15e-09;25!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,5.42e-195,1;DOID:2394,1.43e-15,14;DOID:299,2.15e-09,25;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0006947!9.94e-18!3;UBERON:0004054!9.94e-18!3;UBERON:0004911!3.08e-14!1;UBERON:0001000!4.53e-14!1;UBERON:0005352!4.53e-14!1;UBERON:0001301!8.58e-14!1;UBERON:0002038!9.73e-14!1;UBERON:0009661!9.73e-14!1;UBERON:0006834!1.25e-13!1;UBERON:0005904!1.52e-13!4;UBERON:0003133!4.78e-09!48;UBERON:0004175!2.94e-08!25;UBERON:0004909!9.25e-08!2;UBERON:0001876!9.87e-08!2;UBERON:0002113!1.29e-07!27;UBERON:0003918!1.29e-07!27;UBERON:0005095!1.29e-07!27;UBERON:0007687!1.29e-07!27;UBERON:0002950!1.64e-07!2;UBERON:0001891!1.64e-07!2;UBERON:0009616!1.64e-07!2;UBERON:0005156!2.73e-07!59;UBERON:0000990!2.73e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.42e-195;1!UBERON:0004909;1.55e-98;2!UBERON:0000992;1.21e-16;13!UBERON:0000991;6.74e-11;21!UBERON:0000474;2.32e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,5.42e-195,1;UBERON:0004909,1.55e-98,2;UBERON:0000992,1.21e-16,13;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67783147696688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chrX:35711783..35711785,+ | |||
}} | |||
Revision as of 11:46, 14 September 2013
| Short description: | p@chrX:35711783..35711785, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chrX:35711783..35711785, + |
| Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| serous secreting cell | 5.42e-195 | 1 |
| seromucus secreting cell | 1.55e-98 | 2 |
| secretory cell | 5.81e-07 | 36 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of female gonad | 5.42e-195 | 1 |
| epithelium of gonad | 1.55e-98 | 2 |
| female gonad | 1.21e-16 | 13 |
| gonad | 6.74e-11 | 21 |
| indifferent external genitalia | 6.74e-11 | 21 |
| indifferent gonad | 6.74e-11 | 21 |
| gonad primordium | 6.74e-11 | 21 |
| external genitalia | 1.80e-10 | 22 |
| female reproductive organ | 8.21e-07 | 37 |
| female reproductive system | 8.21e-07 | 37 |
| Ontology term | p-value | n |
|---|---|---|
| ovary epithelial cancer | 5.42e-195 | 1 |
| ovarian cancer | 1.43e-15 | 14 |
| adenocarcinoma | 2.15e-09 | 25 |
| female reproductive organ cancer | 8.32e-09 | 27 |
| reproductive organ cancer | 2.67e-08 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
