FFCP PHASE1:Mm9::chr7:142844061..142844065,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:142844061..142844065,+|id=chr7:142844061..142844065,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,6.84e-13,32;CL:0002032,6.84e-13,32;CL:0000037,6.84e-13,32;CL:0000837,6.84e-13,32;CL:0000084,1.29e-10,11;CL:0000827,1.29e-10,11;CL:0000838,1.20e-09,12;CL:0000542,7.85e-09,13;CL:0000051,7.85e-09,13;CL:0002320,4.61e-08,46;CL:0000134,4.61e-08,46;CL:0000791,8.13e-07,9;CL:0000789,8.13e-07,9;CL:0002420,8.13e-07,9;CL:0002419,8.13e-07,9;CL:0000790,8.13e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.67e-09,3;DOID:4045,1.67e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.61e-08,46|phase1_expression=0,0,0.454999239389536,0,0,0,0,1.80772652818207,0.703943610758334,0.70219357896598,0,0,1.19840510951844,1.39872643870396,0.666219523631325,0,0,1.26184866143295,1.09691546884591,0.42438965179803,0.17008658030214,2.28369187762036,1.30599894569468,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,3.1253413780952,3.14114246384279,20.5881020810855,6.83045484958446,8.73918635456076,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.838913030288682,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0.427115042397309,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,2.65383165584962,0.647067399789637,0.441683036920787,0.969750506270444,0,0.878342391034642,1.04723353406728,0.255457055208591,1.1981512450592,1.79970819298022,1.90605340609597,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0.517406741478031,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0.199034266818493,2.1066395619397,0.51469581422943,1.98914449576915,0,0,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.658650345873152,0.134206418760372,1.26173969138476,0.205809224758569,0.991256348951394,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0.0632365371242573,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0.333690211432188,0,0.449724224769707,0,0.72353147925725,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,2.87536413054709,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.945810864637146,0.221464689648775,0.637819074629948,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0.491764273019036,1.10374698521893,0.321101179975584,0.35163505977661,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.16488625294148,1.45317984026315,0.603129249281559,0.358117032009409,0.492422699235184,0.582961673259701,0.556275906031529,0.512612642393558,0.412773735926445,0,0.376736914009382,0.683471138605126,1.14389086603261,1.01987057996313,0.839708713941948,0.967399816630967,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.539457385539283,0.330613822901344,0,0.388844919875379,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0.864090018773596,0.948033361884535,0.608175645870493,0.308132871494482,0.51968329191118,0.537080087002444,0.79472541912506,0.480781798079875,1.18151621739662,0.504832249740738,0.457240839929999,1.20991422164209,1.16949456887703,1.44317762460494,2.22066114144981,0.906921534460845,0.221985953374065,0,0,0.579568782096571,0.187682475451182,0,0.643105137237198,1.00314420807073,0,0.460325236507177,0,0,0,1.5107877947794,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0,0,0.532427418478012,0.476872379894642,0.145346416632329,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0|short_description=p@chr7:142844061..142844065,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:142844061..142844065,+ | |||
|id=chr7:142844061..142844065,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.84e-13,32;CL:0002032,6.84e-13,32;CL:0000037,6.84e-13,32;CL:0000837,6.84e-13,32;CL:0000084,1.29e-10,11;CL:0000827,1.29e-10,11;CL:0000838,1.20e-09,12;CL:0000542,7.85e-09,13;CL:0000051,7.85e-09,13;CL:0002320,4.61e-08,46;CL:0000134,4.61e-08,46;CL:0000791,8.13e-07,9;CL:0000789,8.13e-07,9;CL:0002420,8.13e-07,9;CL:0002419,8.13e-07,9;CL:0000790,8.13e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.67e-09,3;DOID:4045,1.67e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.61e-08,46 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,1.80772652818207,0.703943610758334,0.70219357896598,0,0,1.19840510951844,1.39872643870396,0.666219523631325,0,0,1.26184866143295,1.09691546884591,0.42438965179803,0.17008658030214,2.28369187762036,1.30599894569468,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,3.1253413780952,3.14114246384279,20.5881020810855,6.83045484958446,8.73918635456076,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.838913030288682,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0,0.427115042397309,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,2.65383165584962,0.647067399789637,0.441683036920787,0.969750506270444,0,0.878342391034642,1.04723353406728,0.255457055208591,1.1981512450592,1.79970819298022,1.90605340609597,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.203678727700633,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0.517406741478031,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0.199034266818493,2.1066395619397,0.51469581422943,1.98914449576915,0,0,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0,0,0.329119699826961,0.492502392237286,0.243206428637567,0.146199987425332,0.658650345873152,0.134206418760372,1.26173969138476,0.205809224758569,0.991256348951394,0.264450566663544,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0.216138049874694,0.796565093017469,0,0,0,0,0,0,0.0632365371242573,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0.333690211432188,0,0.449724224769707,0,0.72353147925725,0.50925170356284,0.287696137450811,0.648540907100142,0.274561413188081,2.87536413054709,0,0.312037673114561,0,0.179397413521912,0,0.554259570499814,0,0,0,0.234690248288502,0,0.238043640886014,0.390267295715598,0.945810864637146,0.221464689648775,0.637819074629948,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0.491764273019036,1.10374698521893,0.321101179975584,0.35163505977661,0,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.321321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0.16488625294148,1.45317984026315,0.603129249281559,0.358117032009409,0.492422699235184,0.582961673259701,0.556275906031529,0.512612642393558,0.412773735926445,0,0.376736914009382,0.683471138605126,1.14389086603261,1.01987057996313,0.839708713941948,0.967399816630967,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.539457385539283,0.330613822901344,0,0.388844919875379,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0.864090018773596,0.948033361884535,0.608175645870493,0.308132871494482,0.51968329191118,0.537080087002444,0.79472541912506,0.480781798079875,1.18151621739662,0.504832249740738,0.457240839929999,1.20991422164209,1.16949456887703,1.44317762460494,2.22066114144981,0.906921534460845,0.221985953374065,0,0,0.579568782096571,0.187682475451182,0,0.643105137237198,1.00314420807073,0,0.460325236507177,0,0,0,1.5107877947794,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0,0,0.532427418478012,0.476872379894642,0.145346416632329,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr7:142844061..142844065,+ | |||
}} |
Revision as of 12:08, 14 September 2013
Short description: | p@chr7:142844061..142844065, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:142844061..142844065, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.84e-13 | 32 |
hematopoietic oligopotent progenitor cell | 6.84e-13 | 32 |
hematopoietic stem cell | 6.84e-13 | 32 |
hematopoietic multipotent progenitor cell | 6.84e-13 | 32 |
T cell | 1.29e-10 | 11 |
pro-T cell | 1.29e-10 | 11 |
lymphoid lineage restricted progenitor cell | 1.20e-09 | 12 |
lymphocyte | 7.85e-09 | 13 |
common lymphoid progenitor | 7.85e-09 | 13 |
connective tissue cell | 4.61e-08 | 46 |
mesenchymal cell | 4.61e-08 | 46 |
mature alpha-beta T cell | 8.13e-07 | 9 |
alpha-beta T cell | 8.13e-07 | 9 |
immature T cell | 8.13e-07 | 9 |
mature T cell | 8.13e-07 | 9 |
immature alpha-beta T cell | 8.13e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.61e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.67e-09 | 3 |
muscle cancer | 1.67e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.