FFCP PHASE1:Mm9::chr7:25990463..25990474,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:25990463..25990474,-|id=chr7:25990463..25990474,-|ontology_enrichment_celltype=CL:0000624!8.47e-11!8;CL:0000893!3.75e-10!6;CL:0002489!3.75e-10!6;CL:0000898!3.75e-10!6;CL:0000809!3.75e-10!6;CL:0000810!3.75e-10!6;CL:0000895!3.75e-10!6;CL:0000808!3.75e-10!6;CL:0000894!3.75e-10!6;CL:0000806!3.75e-10!6;CL:0000807!3.75e-10!6;CL:0000805!3.75e-10!6;CL:0002425!3.75e-10!6;CL:0002436!3.75e-10!6;CL:0002427!3.75e-10!6;CL:0002428!3.75e-10!6;CL:0002429!3.75e-10!6;CL:0002433!3.75e-10!6;CL:0002431!3.75e-10!6;CL:0002432!3.75e-10!6;CL:0000791!1.62e-09!9;CL:0000789!1.62e-09!9;CL:0002420!1.62e-09!9;CL:0002419!1.62e-09!9;CL:0000790!1.62e-09!9;CL:0000084!1.19e-07!11;CL:0000827!1.19e-07!11;CL:0000988!3.38e-07!32;CL:0002032!3.38e-07!32;CL:0000037!3.38e-07!32;CL:0000566!3.38e-07!32;CL:0000837!3.38e-07!32;CL:0000838!5.94e-07!12|ontology_enrichment_celltype_v019_2=CL:0000815,2.06e-13,1;CL:0000792,2.06e-13,1;CL:0000355,3.07e-13,9|ontology_enrichment_disease=DOID:0060100!4.77e-09!3;DOID:4045!4.77e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.98e-38,3;DOID:4045,4.98e-38,3;DOID:0050686,1.83e-19,6|ontology_enrichment_uberon=UBERON:0002193!1.69e-13!48;UBERON:0002370!4.93e-12!23;UBERON:0000974!4.93e-12!23;UBERON:0004807!4.93e-12!23;UBERON:0005058!4.93e-12!23;UBERON:0003351!4.93e-12!23;UBERON:0009113!4.93e-12!23;UBERON:0003295!4.93e-12!23;UBERON:0009722!4.93e-12!23;UBERON:0005562!4.93e-12!23;UBERON:0007690!4.93e-12!23;UBERON:0006562!1.99e-11!24;UBERON:0003408!1.99e-11!24;UBERON:0001557!1.99e-11!24;UBERON:0001042!1.99e-11!24;UBERON:0008814!1.99e-11!24;UBERON:0009145!1.99e-11!24;UBERON:0002390!2.30e-11!45;UBERON:0003061!2.30e-11!45;UBERON:0004177!8.46e-11!29;UBERON:0000072!6.94e-10!27;UBERON:0002405!5.52e-09!70;UBERON:0000065!5.76e-08!41;UBERON:0001004!1.04e-07!42;UBERON:0000063!4.45e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.07e-13,9;UBERON:0002036,3.07e-13,9;UBERON:0002385,3.07e-13,9;UBERON:0000486,3.07e-13,9;UBERON:0007503,3.07e-13,9;UBERON:0001015,3.07e-13,9;UBERON:0002329,3.07e-13,9;UBERON:0003082,3.07e-13,9;UBERON:0003059,3.07e-13,9;UBERON:0007282,3.07e-13,9;UBERON:0004290,3.07e-13,9;UBERON:0009618,3.07e-13,9;UBERON:0000383,5.47e-12,10;UBERON:0007524,5.80e-11,11;UBERON:0003077,5.80e-11,11;UBERON:0007285,5.80e-11,11|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0.468129052643987,0.856089841127525,0.319088635981346,0.171200729931206,0.611942816932982,0,0,0,0.473193248037357,0.274228867211478,0.84877930359606,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,10.0447591376858,3.1253413780952,4.18818995179039,35.2938892818609,2.73218193983378,7.2826552954673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0.339956859987711,0.559805809294632,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.590758108698309,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:25990463..25990474,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:25990463..25990474,- | |||
|id=chr7:25990463..25990474,- | |||
|ontology_enrichment_celltype=CL:0000624!8.47e-11!8;CL:0000893!3.75e-10!6;CL:0002489!3.75e-10!6;CL:0000898!3.75e-10!6;CL:0000809!3.75e-10!6;CL:0000810!3.75e-10!6;CL:0000895!3.75e-10!6;CL:0000808!3.75e-10!6;CL:0000894!3.75e-10!6;CL:0000806!3.75e-10!6;CL:0000807!3.75e-10!6;CL:0000805!3.75e-10!6;CL:0002425!3.75e-10!6;CL:0002436!3.75e-10!6;CL:0002427!3.75e-10!6;CL:0002428!3.75e-10!6;CL:0002429!3.75e-10!6;CL:0002433!3.75e-10!6;CL:0002431!3.75e-10!6;CL:0002432!3.75e-10!6;CL:0000791!1.62e-09!9;CL:0000789!1.62e-09!9;CL:0002420!1.62e-09!9;CL:0002419!1.62e-09!9;CL:0000790!1.62e-09!9;CL:0000084!1.19e-07!11;CL:0000827!1.19e-07!11;CL:0000988!3.38e-07!32;CL:0002032!3.38e-07!32;CL:0000037!3.38e-07!32;CL:0000566!3.38e-07!32;CL:0000837!3.38e-07!32;CL:0000838!5.94e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.06e-13,1;CL:0000792,2.06e-13,1;CL:0000355,3.07e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.77e-09!3;DOID:4045!4.77e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.98e-38,3;DOID:4045,4.98e-38,3;DOID:0050686,1.83e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.69e-13!48;UBERON:0002370!4.93e-12!23;UBERON:0000974!4.93e-12!23;UBERON:0004807!4.93e-12!23;UBERON:0005058!4.93e-12!23;UBERON:0003351!4.93e-12!23;UBERON:0009113!4.93e-12!23;UBERON:0003295!4.93e-12!23;UBERON:0009722!4.93e-12!23;UBERON:0005562!4.93e-12!23;UBERON:0007690!4.93e-12!23;UBERON:0006562!1.99e-11!24;UBERON:0003408!1.99e-11!24;UBERON:0001557!1.99e-11!24;UBERON:0001042!1.99e-11!24;UBERON:0008814!1.99e-11!24;UBERON:0009145!1.99e-11!24;UBERON:0002390!2.30e-11!45;UBERON:0003061!2.30e-11!45;UBERON:0004177!8.46e-11!29;UBERON:0000072!6.94e-10!27;UBERON:0002405!5.52e-09!70;UBERON:0000065!5.76e-08!41;UBERON:0001004!1.04e-07!42;UBERON:0000063!4.45e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.07e-13,9;UBERON:0002036,3.07e-13,9;UBERON:0002385,3.07e-13,9;UBERON:0000486,3.07e-13,9;UBERON:0007503,3.07e-13,9;UBERON:0001015,3.07e-13,9;UBERON:0002329,3.07e-13,9;UBERON:0003082,3.07e-13,9;UBERON:0003059,3.07e-13,9;UBERON:0007282,3.07e-13,9;UBERON:0004290,3.07e-13,9;UBERON:0009618,3.07e-13,9;UBERON:0000383,5.47e-12,10;UBERON:0007524,5.80e-11,11;UBERON:0003077,5.80e-11,11;UBERON:0007285,5.80e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,0,0.468129052643987,0.856089841127525,0.319088635981346,0.171200729931206,0.611942816932982,0,0,0,0.473193248037357,0.274228867211478,0.84877930359606,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,10.0447591376858,3.1253413780952,4.18818995179039,35.2938892818609,2.73218193983378,7.2826552954673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457556346413045,0.339956859987711,0.559805809294632,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0.590758108698309,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:25990463..25990474,- | |||
}} |
Revision as of 12:52, 14 September 2013
Short description: | p@chr7:25990463..25990474, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25990463..25990474, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.06e-13 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.06e-13 | 1 |
multi-potent skeletal muscle stem cell | 3.07e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.07e-13 | 9 |
striated muscle tissue | 3.07e-13 | 9 |
muscle tissue | 3.07e-13 | 9 |
multilaminar epithelium | 3.07e-13 | 9 |
epithelial vesicle | 3.07e-13 | 9 |
musculature | 3.07e-13 | 9 |
somite | 3.07e-13 | 9 |
myotome | 3.07e-13 | 9 |
presomitic mesoderm | 3.07e-13 | 9 |
presumptive segmental plate | 3.07e-13 | 9 |
dermomyotome | 3.07e-13 | 9 |
trunk paraxial mesoderm | 3.07e-13 | 9 |
musculature of body | 5.47e-12 | 10 |
dense mesenchyme tissue | 5.80e-11 | 11 |
paraxial mesoderm | 5.80e-11 | 11 |
presumptive paraxial mesoderm | 5.80e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.98e-38 | 3 |
muscle cancer | 4.98e-38 | 3 |
organ system cancer | 1.83e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.