FFCP PHASE1:Mm9::chr9:60181993..60182002,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2313|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:60181993..60182002,+|id=chr9:60181993..60182002,+|ontology_enrichment_celltype=CL:0000239!1.19e-17!6;CL:0000677!1.19e-17!6;CL:0000212!1.19e-17!6;CL:0000584!1.19e-17!6;CL:0002563!2.75e-15!9;CL:0002251!2.75e-15!9;CL:0000075!4.83e-15!7;CL:0000473!2.34e-10!3;CL:0000627!2.34e-10!3;CL:0000682!2.34e-10!3;CL:0000066!2.39e-10!25;CL:0002076!8.61e-09!15|ontology_enrichment_celltype_v019_2=CL:0000682,9.33e-18,3;CL:0000239,2.72e-09,6;CL:0000677,2.72e-09,6;CL:0000584,2.72e-09,6;CL:0000075,4.95e-08,7;CL:0000066,6.36e-08,25;CL:0000473,6.48e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.57e-23!43;UBERON:0000344!8.85e-22!15;UBERON:0005409!5.93e-18!59;UBERON:0001242!5.96e-17!13;UBERON:0000060!5.96e-17!13;UBERON:0001262!5.96e-17!13;UBERON:0004786!5.96e-17!13;UBERON:0003350!2.75e-15!9;UBERON:0004808!2.75e-15!9;UBERON:0001277!2.75e-15!9;UBERON:0004923!8.33e-13!24;UBERON:0000485!2.46e-12!11;UBERON:0001007!1.38e-07!128;UBERON:0001555!1.38e-07!128;UBERON:0007026!1.38e-07!128;UBERON:0004119!2.13e-07!130;UBERON:0000925!2.13e-07!130;UBERON:0006595!2.13e-07!130;UBERON:0001962!7.94e-07!2;UBERON:0001961!7.94e-07!2;UBERON:0001744!7.94e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-20,31;UBERON:0005409,2.00e-15,47;UBERON:0000344,2.08e-09,15;UBERON:0001242,2.48e-07,13;UBERON:0001262,2.48e-07,13;UBERON:0004786,2.48e-07,13|phase1_expression=0,2.79180326111489,10.4649825059593,3.0246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.91763712426868,1.72269589234506,3.4460959692726,3.01659725760245,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,1.32225283331772,0,0,0,0,0,0.570676878337677,0.949058123089023,1.4822905925161,1.00534083520108,0.994782360205754,1.55971269695296,0,1.29682829924817,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr9:60181993..60182002,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2313 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:60181993..60182002,+ | |||
|id=chr9:60181993..60182002,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.19e-17!6;CL:0000677!1.19e-17!6;CL:0000212!1.19e-17!6;CL:0000584!1.19e-17!6;CL:0002563!2.75e-15!9;CL:0002251!2.75e-15!9;CL:0000075!4.83e-15!7;CL:0000473!2.34e-10!3;CL:0000627!2.34e-10!3;CL:0000682!2.34e-10!3;CL:0000066!2.39e-10!25;CL:0002076!8.61e-09!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.33e-18,3;CL:0000239,2.72e-09,6;CL:0000677,2.72e-09,6;CL:0000584,2.72e-09,6;CL:0000075,4.95e-08,7;CL:0000066,6.36e-08,25;CL:0000473,6.48e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.57e-23!43;UBERON:0000344!8.85e-22!15;UBERON:0005409!5.93e-18!59;UBERON:0001242!5.96e-17!13;UBERON:0000060!5.96e-17!13;UBERON:0001262!5.96e-17!13;UBERON:0004786!5.96e-17!13;UBERON:0003350!2.75e-15!9;UBERON:0004808!2.75e-15!9;UBERON:0001277!2.75e-15!9;UBERON:0004923!8.33e-13!24;UBERON:0000485!2.46e-12!11;UBERON:0001007!1.38e-07!128;UBERON:0001555!1.38e-07!128;UBERON:0007026!1.38e-07!128;UBERON:0004119!2.13e-07!130;UBERON:0000925!2.13e-07!130;UBERON:0006595!2.13e-07!130;UBERON:0001962!7.94e-07!2;UBERON:0001961!7.94e-07!2;UBERON:0001744!7.94e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.30e-20,31;UBERON:0005409,2.00e-15,47;UBERON:0000344,2.08e-09,15;UBERON:0001242,2.48e-07,13;UBERON:0001262,2.48e-07,13;UBERON:0004786,2.48e-07,13 | |||
|phase1_expression=0,2.79180326111489,10.4649825059593,3.0246421130683,0.500895729946347,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.91763712426868,1.72269589234506,3.4460959692726,3.01659725760245,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,1.32225283331772,0,0,0,0,0,0.570676878337677,0.949058123089023,1.4822905925161,1.00534083520108,0.994782360205754,1.55971269695296,0,1.29682829924817,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr9:60181993..60182002,+ | |||
}} |
Revision as of 18:25, 14 September 2013
Short description: | p@chr9:60181993..60182002, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:60181993..60182002, + |
Coexpression cluster: | MCL_coexpression_mm9:2313 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.33e-18 | 3 |
brush border epithelial cell | 2.72e-09 | 6 |
gut absorptive cell | 2.72e-09 | 6 |
enterocyte | 2.72e-09 | 6 |
columnar/cuboidal epithelial cell | 4.95e-08 | 7 |
epithelial cell | 6.36e-08 | 25 |
defensive cell | 6.48e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.30e-20 | 31 |
gastrointestinal system | 2.00e-15 | 47 |
mucosa | 2.08e-09 | 15 |
intestinal mucosa | 2.48e-07 | 13 |
wall of intestine | 2.48e-07 | 13 |
gastrointestinal system mucosa | 2.48e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.