Personal tools

FFCP PHASE1:Mm9::chrX:93361400..93361413,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3763|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:93361400..93361413,+|id=chrX:93361400..93361413,+|ontology_enrichment_celltype=CL:0002031!3.22e-09!25;CL:0000219!1.64e-08!54;CL:0000738!2.43e-08!17;CL:0002087!2.43e-08!17;CL:0000988!8.66e-08!32;CL:0002032!8.66e-08!32;CL:0000037!8.66e-08!32;CL:0000566!8.66e-08!32;CL:0000837!8.66e-08!32;CL:0000838!1.97e-07!12;CL:0002320!2.67e-07!46;CL:0000134!2.67e-07!46;CL:0000084!9.26e-07!11;CL:0000827!9.26e-07!11|ontology_enrichment_celltype_v019_2=CL:0000219,3.24e-13,54;CL:0000738,5.90e-13,17;CL:0002087,5.90e-13,17;CL:0002320,3.95e-11,46;CL:0000134,3.95e-11,46;CL:0002031,1.26e-10,25;CL:0000838,1.37e-10,12;CL:0000542,1.28e-09,13;CL:0000051,1.28e-09,13;CL:0000791,3.40e-09,9;CL:0000789,3.40e-09,9;CL:0002420,3.40e-09,9;CL:0002419,3.40e-09,9;CL:0000790,3.40e-09,9;CL:0000084,4.36e-09,11;CL:0000827,4.36e-09,11;CL:0000988,1.23e-08,32;CL:0002032,1.23e-08,32;CL:0000037,1.23e-08,32;CL:0000837,1.23e-08,32;CL:0000723,1.92e-08,91;CL:0000048,1.92e-08,91;CL:0000624,1.32e-07,8;CL:0000034,1.79e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!3.80e-09!88;UBERON:0002193!1.83e-08!48;UBERON:0002390!2.18e-08!45;UBERON:0003061!2.18e-08!45;UBERON:0000065!5.01e-08!41;UBERON:0001004!1.89e-07!42;UBERON:0002384!2.67e-07!46;UBERON:0005178!8.13e-07!17;UBERON:0005181!8.13e-07!17;UBERON:0002224!8.13e-07!17;UBERON:0000915!8.13e-07!17;UBERON:0008947!8.13e-07!17;UBERON:0003258!8.13e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.95e-11,46;UBERON:0005178,2.50e-08,17;UBERON:0005181,2.50e-08,17;UBERON:0002224,2.50e-08,17;UBERON:0000915,2.50e-08,17;UBERON:0008947,2.50e-08,17;UBERON:0003258,2.50e-08,17|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,2.25261955442667,2.34064526321993,0.68487187290202,0.717949430958028,2.73921167889929,1.48614684112296,0.333109761815663,0.809901069559304,0.699561878128147,1.26184866143295,0.822686601634433,1.27316895539409,0.595303031057488,0.695036658406197,1.04479915655574,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,2.51118978442145,0,2.09409497589519,1.17646297606203,1.36609096991689,1.45653105909346,0.629484089877886,0.405507724878058,0.550640256485045,0,1.52617609466313,0.878744730937887,1.55543919259427,1.39986421625363,0,3.35565212115473,2.90144856804538,4.7053131879945,2.57259436035947,1.71920063963254,2.57836046138721,0.202316460859598,0,0,1.0165335962074,0,0.449949858640699,2.96659908770092,0.7104801149461,0.599200221036809,1.53687322128622,0.207379224616955,0.405017814995072,0,0.571301968807607,0.441737081903227,0,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0,0.569486723196412,0.186399445825301,1.21161909333094,0.755715601067855,0,1.72084775396277,0,0,0,0,0.140444420131752,2.04516387093669,4.1565760736459,1.06001872353102,0.281686839553361,1.28326477414318,0,0,1.73192832808971,3.80039798212648,5.05524445014783,0.22836775943812,0.776813650941515,0.445326417194474,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,0,1.15679485535929,2.65383165584962,0.647067399789637,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,0.599075622529601,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.497627882440372,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0.431135985865684,0.189106080167819,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0.398068533636986,0,0.257347907114715,1.13665399758237,0.207125772535502,0.938104239924385,0.900310307305074,0.473489471170421,0.393528463494808,0.462801338662135,0.930135779001631,0,0.350296027101508,0.329119699826961,0.492502392237286,0.162137619091711,0.730999937126662,1.3173006917463,0.268412837520744,0,0.102904612379284,0,0,0,0.696710015581316,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,1.01825663922657,0.387904974335251,0.49095073923223,0.189709611372772,0.147610147979602,0.784993639206874,0.246794327843601,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,2.87536413054709,0,0,0.252578877947112,0.179397413521912,0.482443521363367,1.47802552133284,0,0.488894929326078,0.169745085775188,0.938760993154008,0.837531287209079,1.19021820443007,1.36593553500459,0.788175720530955,2.43611158613652,0.797273843287435,1.96635977658886,1.72684981865896,1.73578870297814,4.52373851817817,6.52686820582452,0,0,0,0.35163505977661,0.491804836130026,0,0,0.780877488593277,0.215423397732799,1.43381278771531,0.222798674082394,0,1.61924280669958,0.584511715822624,1.18586333383957,0,0.141940085208269,0.534196811001766,0,0.329940245945071,1.32745138339963,0,0,0.565815239267694,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.258717367565509,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,0.469343416127421,0.63549621259146,0,0.16488625294148,0.484393280087717,0,0.596861720015682,0.164140899745061,0.291480836629851,0,0.512612642393558,0.206386867963223,0.555583582109135,0.941842285023455,0.820165366326151,1.14389086603261,0.169978429993855,0.559805809294632,0.276399947608848,0,0.158167996790568,0,0,0.627264888043406,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0,0,0.821687657318618,0.51968329191118,0.179026695667481,0.596044064343795,0.841368146639782,0.590758108698309,0.706765149637033,0.457240839929999,0.604957110821043,0.487289403698762,0.481059208201647,0.701261413089414,0,0,0.897138566094757,0.671538465456314,0.386379188064381,0.563047426353546,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0,0.565879024158229,0.37456602987953,0.384150914429216,0.459483751644906,0,0.347652977834566,0.578727661391115,0,0.735994600671987,0,0.532427418478012,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0.263069711437843,0.407412341537585,1.12228454331548,0,0.197008964751127,0,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0.57386499620653,0.661774257358546,0|short_description=p@chrX:93361400..93361413,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=3763
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chrX:93361400..93361413,+
|id=chrX:93361400..93361413,+
|ontology_enrichment_celltype=CL:0002031!3.22e-09!25;CL:0000219!1.64e-08!54;CL:0000738!2.43e-08!17;CL:0002087!2.43e-08!17;CL:0000988!8.66e-08!32;CL:0002032!8.66e-08!32;CL:0000037!8.66e-08!32;CL:0000566!8.66e-08!32;CL:0000837!8.66e-08!32;CL:0000838!1.97e-07!12;CL:0002320!2.67e-07!46;CL:0000134!2.67e-07!46;CL:0000084!9.26e-07!11;CL:0000827!9.26e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000219,3.24e-13,54;CL:0000738,5.90e-13,17;CL:0002087,5.90e-13,17;CL:0002320,3.95e-11,46;CL:0000134,3.95e-11,46;CL:0002031,1.26e-10,25;CL:0000838,1.37e-10,12;CL:0000542,1.28e-09,13;CL:0000051,1.28e-09,13;CL:0000791,3.40e-09,9;CL:0000789,3.40e-09,9;CL:0002420,3.40e-09,9;CL:0002419,3.40e-09,9;CL:0000790,3.40e-09,9;CL:0000084,4.36e-09,11;CL:0000827,4.36e-09,11;CL:0000988,1.23e-08,32;CL:0002032,1.23e-08,32;CL:0000037,1.23e-08,32;CL:0000837,1.23e-08,32;CL:0000723,1.92e-08,91;CL:0000048,1.92e-08,91;CL:0000624,1.32e-07,8;CL:0000034,1.79e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003081!3.80e-09!88;UBERON:0002193!1.83e-08!48;UBERON:0002390!2.18e-08!45;UBERON:0003061!2.18e-08!45;UBERON:0000065!5.01e-08!41;UBERON:0001004!1.89e-07!42;UBERON:0002384!2.67e-07!46;UBERON:0005178!8.13e-07!17;UBERON:0005181!8.13e-07!17;UBERON:0002224!8.13e-07!17;UBERON:0000915!8.13e-07!17;UBERON:0008947!8.13e-07!17;UBERON:0003258!8.13e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.95e-11,46;UBERON:0005178,2.50e-08,17;UBERON:0005181,2.50e-08,17;UBERON:0002224,2.50e-08,17;UBERON:0000915,2.50e-08,17;UBERON:0008947,2.50e-08,17;UBERON:0003258,2.50e-08,17
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,2.25261955442667,2.34064526321993,0.68487187290202,0.717949430958028,2.73921167889929,1.48614684112296,0.333109761815663,0.809901069559304,0.699561878128147,1.26184866143295,0.822686601634433,1.27316895539409,0.595303031057488,0.695036658406197,1.04479915655574,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,2.51118978442145,0,2.09409497589519,1.17646297606203,1.36609096991689,1.45653105909346,0.629484089877886,0.405507724878058,0.550640256485045,0,1.52617609466313,0.878744730937887,1.55543919259427,1.39986421625363,0,3.35565212115473,2.90144856804538,4.7053131879945,2.57259436035947,1.71920063963254,2.57836046138721,0.202316460859598,0,0,1.0165335962074,0,0.449949858640699,2.96659908770092,0.7104801149461,0.599200221036809,1.53687322128622,0.207379224616955,0.405017814995072,0,0.571301968807607,0.441737081903227,0,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0,0.182975287204819,0,0.279182999001381,0,0.45839474333043,0,0.569486723196412,0.186399445825301,1.21161909333094,0.755715601067855,0,1.72084775396277,0,0,0,0,0.140444420131752,2.04516387093669,4.1565760736459,1.06001872353102,0.281686839553361,1.28326477414318,0,0,1.73192832808971,3.80039798212648,5.05524445014783,0.22836775943812,0.776813650941515,0.445326417194474,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,0,1.15679485535929,2.65383165584962,0.647067399789637,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,0.599075622529601,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0.203678727700633,0.497627882440372,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0.258703370739016,0.431135985865684,0.189106080167819,0,0.219195732427575,0,1.0447564995665,0.411564272815887,0.398068533636986,0,0.257347907114715,1.13665399758237,0.207125772535502,0.938104239924385,0.900310307305074,0.473489471170421,0.393528463494808,0.462801338662135,0.930135779001631,0,0.350296027101508,0.329119699826961,0.492502392237286,0.162137619091711,0.730999937126662,1.3173006917463,0.268412837520744,0,0.102904612379284,0,0,0,0.696710015581316,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,1.1270773567308,1.01825663922657,0.387904974335251,0.49095073923223,0.189709611372772,0.147610147979602,0.784993639206874,0.246794327843601,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,2.87536413054709,0,0,0.252578877947112,0.179397413521912,0.482443521363367,1.47802552133284,0,0.488894929326078,0.169745085775188,0.938760993154008,0.837531287209079,1.19021820443007,1.36593553500459,0.788175720530955,2.43611158613652,0.797273843287435,1.96635977658886,1.72684981865896,1.73578870297814,4.52373851817817,6.52686820582452,0,0,0,0.35163505977661,0.491804836130026,0,0,0.780877488593277,0.215423397732799,1.43381278771531,0.222798674082394,0,1.61924280669958,0.584511715822624,1.18586333383957,0,0.141940085208269,0.534196811001766,0,0.329940245945071,1.32745138339963,0,0,0.565815239267694,0,0.307435147943927,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.258717367565509,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,0.469343416127421,0.63549621259146,0,0.16488625294148,0.484393280087717,0,0.596861720015682,0.164140899745061,0.291480836629851,0,0.512612642393558,0.206386867963223,0.555583582109135,0.941842285023455,0.820165366326151,1.14389086603261,0.169978429993855,0.559805809294632,0.276399947608848,0,0.158167996790568,0,0,0.627264888043406,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,0,0,0.821687657318618,0.51968329191118,0.179026695667481,0.596044064343795,0.841368146639782,0.590758108698309,0.706765149637033,0.457240839929999,0.604957110821043,0.487289403698762,0.481059208201647,0.701261413089414,0,0,0.897138566094757,0.671538465456314,0.386379188064381,0.563047426353546,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0,0,0,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0,0.565879024158229,0.37456602987953,0.384150914429216,0.459483751644906,0,0.347652977834566,0.578727661391115,0,0.735994600671987,0,0.532427418478012,0.476872379894642,0,0,0.169229215783353,0.182927972872773,0.263069711437843,0.407412341537585,1.12228454331548,0,0.197008964751127,0,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0.57386499620653,0.661774257358546,0
|short_description=p@chrX:93361400..93361413,+
}}

Revision as of 20:17, 14 September 2013

Short description:p@chrX:93361400..93361413, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chrX:93361400..93361413, +
Coexpression cluster:MCL_coexpression_mm9:3763
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chrX:93361400..93361413+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
connective tissue3.95e-1146
thoracic cavity element2.50e-0817
thoracic segment organ2.50e-0817
thoracic cavity2.50e-0817
thoracic segment of trunk2.50e-0817
respiratory primordium2.50e-0817
endoderm of foregut2.50e-0817







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:93361400..93361413,%2B&oldid=3066902"