FFCP PHASE1:Hg19::chr1:28453609..28453619,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr1:28453609..28453619,+ | |||
|id=chr1:28453609..28453619,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.04e-38!76;CL:0000094!1.99e-36!8;CL:0002057!1.48e-29!42;CL:0000860!1.95e-27!45;CL:0000081!2.14e-26!11;CL:0000763!7.73e-25!112;CL:0000049!7.73e-25!112;CL:0000738!2.01e-21!140;CL:0000839!2.66e-19!70;CL:0000557!5.34e-19!71;CL:0002194!1.26e-18!63;CL:0000576!1.26e-18!63;CL:0000040!1.26e-18!63;CL:0000559!1.26e-18!63;CL:0002009!5.42e-18!65;CL:0000771!9.07e-18!2;CL:0000037!8.44e-17!172;CL:0000566!8.44e-17!172;CL:0002032!8.34e-16!165;CL:0000837!8.34e-16!165;CL:0000988!1.10e-15!182;CL:0000775!3.31e-12!3;CL:0000767!1.87e-11!3;CL:0002087!2.00e-10!119;CL:0002031!6.85e-10!124 | |||
|ontology_enrichment_celltype_v019=CL:0000771;1.99e-98;2!CL:0000094;2.26e-98;8!CL:0000081;6.65e-72;11!CL:0000775;2.83e-66;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.26e-98,8;CL:0000771,2.56e-98,2;CL:0000081,6.65e-72,11;CL:0000775,2.40e-66,3;CL:0000766,1.07e-11,72;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.59e-24!102;UBERON:0003061!1.59e-24!102;UBERON:0002193!4.61e-22!112;UBERON:0002371!1.30e-16!80;UBERON:0001474!2.69e-15!86;UBERON:0000178!2.24e-13!15;UBERON:0000179!2.24e-13!15;UBERON:0000463!2.24e-13!15;UBERON:0004765!1.11e-12!101;UBERON:0001434!1.11e-12!101;UBERON:0002405!7.50e-11!115;UBERON:0003081!7.12e-10!216;UBERON:0002204!9.98e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.65156653411535,0,0,0.632924774881769,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,7.45947924184864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:28453609..28453619,+ | |||
}} | |||
Revision as of 17:24, 10 January 2014
| Short description: | p@chr1:28453609..28453619, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr1:28453609..28453619, + |
| Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| granulocyte | 2.26e-98 | 8 |
| eosinophil | 2.56e-98 | 2 |
| blood cell | 6.65e-72 | 11 |
| neutrophil | 2.40e-66 | 3 |
| myeloid leukocyte | 1.07e-11 | 72 |
| myeloid cell | 4.22e-08 | 108 |
| common myeloid progenitor | 4.22e-08 | 108 |
