FFCP PHASE1:Hg19::chr1:209944599..209944616,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3934 | |||
|description=CAGE_peak_at_chr1:209944599..209944616,- | |||
|id=chr1:209944599..209944616,- | |||
|ontology_enrichment_celltype=CL:0002251!6.78e-12!21;CL:0002076!1.40e-09!43;CL:0000223!2.61e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1001319;2.11e-14;1!CL:1000600;2.11e-14;1!CL:0002535;4.23e-08;2!CL:0000076;4.01e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,3.61e-16,63;CL:1001319,1.61e-14,1;CL:1000600,1.61e-14,1;CL:0002535,4.09e-08,2;CL:0000066,2.31e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.23e-08;2!UBERON:0010056;4.23e-08;2 | |||
|ontology_enrichment_disease=DOID:1749!1.67e-16!14;DOID:305!6.91e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.14e-75;14!DOID:4362;1.31e-11;5!DOID:4074;5.37e-08;2!DOID:4905;5.37e-08;2!DOID:3498;5.37e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.52e-75,14;DOID:305,1.01e-16,106;DOID:0050687,4.90e-12,143;DOID:4362,1.42e-11,5;DOID:162,1.68e-09,235;DOID:14566,2.87e-09,239;DOID:4074,5.74e-08,2;DOID:4905,5.74e-08,2;DOID:3498,5.74e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.97e-15!57;UBERON:0005068!9.97e-15!57;UBERON:0006241!9.97e-15!57;UBERON:0007135!9.97e-15!57;UBERON:0000153!7.36e-13!129;UBERON:0007811!7.36e-13!129;UBERON:0002616!9.95e-13!59;UBERON:0000033!1.47e-12!123;UBERON:0000955!4.07e-12!69;UBERON:0006238!4.07e-12!69;UBERON:0002020!1.40e-11!34;UBERON:0003528!1.40e-11!34;UBERON:0001017!1.76e-11!82;UBERON:0001893!1.91e-11!34;UBERON:0002780!5.15e-11!41;UBERON:0001890!5.15e-11!41;UBERON:0006240!5.15e-11!41;UBERON:0002346!9.98e-11!90;UBERON:0003080!1.28e-10!42;UBERON:0002791!1.39e-10!33;UBERON:0005743!1.56e-10!86;UBERON:0000924!2.04e-10!173;UBERON:0006601!2.04e-10!173;UBERON:0001869!1.01e-09!32;UBERON:0000073!2.20e-09!94;UBERON:0001016!2.20e-09!94;UBERON:0003075!3.20e-09!86;UBERON:0007284!3.20e-09!86;UBERON:0004121!3.50e-09!169;UBERON:0002619!4.51e-09!22;UBERON:0003729!5.42e-09!5;UBERON:0007023!2.93e-08!115;UBERON:0003343!6.45e-08!4;UBERON:0004785!6.45e-08!4;UBERON:0000349!7.66e-08!5;UBERON:0000956!1.26e-07!25;UBERON:0000203!1.26e-07!25;UBERON:0001950!3.14e-07!20;UBERON:0000161!3.36e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.01e-30;4!UBERON:0004785;3.01e-30;4!UBERON:0000974;2.05e-20;6!UBERON:0000997;4.72e-15;1!UBERON:0005056;4.72e-15;1!UBERON:0004176;4.72e-15;1!UBERON:0004645;2.11e-14;1!UBERON:0001256;2.11e-14;1!UBERON:0001259;2.11e-14;1!UBERON:0000344;7.98e-11;20!UBERON:0000002;7.93e-10;6!UBERON:0001560;7.93e-10;6!UBERON:0003729;9.33e-10;13!UBERON:0006955;4.23e-08;2!UBERON:0004801;4.23e-08;2!UBERON:0001255;7.52e-08;2!UBERON:0001556;7.52e-08;2!UBERON:0000161;7.72e-07;19!UBERON:0000166;7.72e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.17e-30,4;UBERON:0004785,3.17e-30,4;UBERON:0000997,4.73e-15,1;UBERON:0005056,4.73e-15,1;UBERON:0004645,1.61e-14,1;UBERON:0001256,1.61e-14,1;UBERON:0001259,1.61e-14,1;UBERON:0000974,1.68e-12,10;UBERON:0000344,7.67e-11,20;UBERON:0000002,8.48e-10,6;UBERON:0001560,8.48e-10,6;UBERON:0003729,9.48e-10,13;UBERON:0006955,4.09e-08,2;UBERON:0004801,4.09e-08,2;UBERON:0001255,6.58e-08,2;UBERON:0001556,6.58e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0.878002283269004,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.736647911487171,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,1.96032172784825,0.185803175125719,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.156679895773023,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0.331737779793674,0.295547618953547,0,0,1.53366118706464,0.0769502585037971,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0.337005664903385,0,0,0,2.15231080825299,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,7.83939179315021,4.26590112243973,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0.144090417154106,0,0.171594997861965,0.14405479798815,0,6.59943296927027,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.136203406111576,0,0,0,0.674921674654501,0,0.0607495566580247,0.670869375198532,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0.488105059607853,0.250381861413,0.573409195690071,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0.212574920101683,0.123935764259002,0,0,0.157723490002507,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,1.76665893301846,0.589848616738702,1.65085738669511,4.04339831526184,0,0,0,0,0,0,0,0.163771917510097,0.739280431085226,0.202612753855184,0,0.413373593002368,0.253663240775627,0,0,0,0.175871244359621,0.383287282918786,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0.236387681767936,0.222462803784138,0,0.471346769748006,0.560544326627578,0,0,0,0,0.158013611732727,0,0,0,0.828864656652147,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0.243835849964539,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0.0999411559249289,2.67830907908486,1.76447435857846,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,1.79087190944144,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr1:209944599..209944616,- | |||
}} |
Revision as of 00:01, 11 January 2014
Short description: | p@chr1:209944599..209944616, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209944599..209944616, - |
Coexpression cluster: | C3934_glassy_epidermoid_oral_ductal_malignant_squamous_acantholytic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 3.61e-16 | 63 |
bladder cell | 1.61e-14 | 1 |
lower urinary tract cell | 1.61e-14 | 1 |
epithelial cell of cervix | 4.09e-08 | 2 |
epithelial cell | 2.31e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.17e-30 | 4 |
respiratory system mucosa | 3.17e-30 | 4 |
mammalian vulva | 4.73e-15 | 1 |
external female genitalia | 4.73e-15 | 1 |
urinary bladder urothelium | 1.61e-14 | 1 |
wall of urinary bladder | 1.61e-14 | 1 |
mucosa of urinary bladder | 1.61e-14 | 1 |
neck | 1.68e-12 | 10 |
mucosa | 7.67e-11 | 20 |
uterine cervix | 8.48e-10 | 6 |
neck of organ | 8.48e-10 | 6 |
mouth mucosa | 9.48e-10 | 13 |
uterine epithelium | 4.09e-08 | 2 |
cervix epithelium | 4.09e-08 | 2 |
urinary bladder | 6.58e-08 | 2 |
lower urinary tract | 6.58e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.52e-75 | 14 |
carcinoma | 1.01e-16 | 106 |
cell type cancer | 4.90e-12 | 143 |
cervical cancer | 1.42e-11 | 5 |
cancer | 1.68e-09 | 235 |
disease of cellular proliferation | 2.87e-09 | 239 |
pancreas adenocarcinoma | 5.74e-08 | 2 |
pancreatic carcinoma | 5.74e-08 | 2 |
pancreatic ductal adenocarcinoma | 5.74e-08 | 2 |