FFCP PHASE1:Hg19::chr11:236025..236096,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5719 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9558 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-449bp_to_ENST00000532097_5end | |||
|coexpression_cluster_id=C3131 | |||
|description=CAGE_peak_3_at_PSMD13_5end | |||
|id=chr11:236025..236096,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.59e-25!140;CL:0000037!6.00e-18!172;CL:0000566!6.00e-18!172;CL:0002031!9.17e-17!124;CL:0000988!3.36e-16!182;CL:0002087!6.31e-16!119;CL:0000838!6.64e-16!52;CL:0000542!1.78e-15!53;CL:0000051!1.78e-15!53;CL:0002032!3.68e-14!165;CL:0000837!3.68e-14!165;CL:0000624!4.36e-14!6;CL:0000791!4.18e-13!18;CL:0000789!4.18e-13!18;CL:0002420!4.18e-13!18;CL:0002419!4.18e-13!18;CL:0000790!4.18e-13!18;CL:0000084!3.04e-10!25;CL:0000827!3.04e-10!25;CL:0000623!5.22e-08!3;CL:0000825!5.22e-08!3;CL:0000842!5.83e-08!3;CL:0000898!6.51e-08!3;CL:0000767!2.29e-07!3;CL:0000766!4.76e-07!76;CL:0002274!5.91e-07!5;CL:0000457!5.91e-07!5;CL:0002191!5.91e-07!5;CL:0000097!5.91e-07!5;CL:0000831!5.91e-07!5;CL:0002028!5.91e-07!5;CL:0000094!8.10e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.67e-32;6!CL:0000791;7.86e-23;18!CL:0000789;7.86e-23;18!CL:0002419;7.86e-23;18!CL:0000623;4.13e-17;3!CL:0000226;5.26e-17;3!CL:0000842;5.26e-17;3!CL:0000898;7.05e-17;3!CL:0000084;5.44e-16;25!CL:0000767;1.34e-15;3!CL:0000094;1.67e-15;8!CL:0000542;3.68e-12;53!CL:0000815;9.56e-12;2!CL:0000792;9.56e-12;2!CL:0002677;9.56e-12;2!CL:0000081;3.19e-11;11!CL:0002393;2.18e-08;6!CL:0002397;2.18e-08;6!CL:0000895;7.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,7.88e-32,6;CL:0000738,4.50e-26,136;CL:0000791,8.28e-23,18;CL:0000789,8.28e-23,18;CL:0002420,8.28e-23,18;CL:0002419,8.28e-23,18;CL:0000790,8.28e-23,18;CL:0000037,5.81e-20,168;CL:0000838,6.27e-20,52;CL:0000542,1.72e-19,53;CL:0000051,1.72e-19,53;CL:0000988,1.22e-18,177;CL:0000623,4.03e-17,3;CL:0000825,4.03e-17,3;CL:0000226,5.26e-17,3;CL:0000842,5.26e-17,3;CL:0000898,6.87e-17,3;CL:0002032,4.17e-16,161;CL:0000837,4.17e-16,161;CL:0000084,5.64e-16,25;CL:0000827,5.64e-16,25;CL:0002087,1.36e-15,115;CL:0000767,1.41e-15,3;CL:0000094,1.57e-15,8;CL:0002031,1.73e-14,120;CL:0000815,9.82e-12,2;CL:0000792,9.82e-12,2;CL:0002677,9.82e-12,2;CL:0000081,3.05e-11,11;CL:0000134,5.77e-07,354;CL:0000810,7.35e-07,1;CL:0000895,7.35e-07,1;CL:0002436,7.35e-07,1;CL:0002427,7.35e-07,1;CL:0002428,7.35e-07,1;CL:0002429,7.35e-07,1;CL:0002433,7.35e-07,1;CL:0002431,7.35e-07,1;CL:0002432,7.35e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;7.86e-23;18!CL:0000051;3.68e-12;53!CL:0002427;7.77e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,6.68719270643137,2.30297638858328,1.39334510984468,0,0,0,0,0,0,8.30993112797816,3.20871115952227,9.54847831149748,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,6.83055562931338,4.69789751496751,8.41001101875504,1.32171328579026,7.8471198817415,0,25.1788505745706,5.10913991573914,42.3539087938989,0,27.7033926638552,2.36723902867367,0,0,8.24896540929544,0,0.270803863765016,0,0,0.164437904603676,0,0,27.2847276218191,2.40786745280742,3.1360657141493,0,32.9569624497652,5.84166657320471,4.55435445635105,0.318565414324097,0,0,0.150575119077773,0,0,0,0,49.7968655765089,19.2556940964125,32.1510176619814,0,0,0,0,0,0,0,0,0,0,0.43917392846563,0,0,0,0,0.174129737299267,0,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,3.9534125230819,0,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0.492663237895943,0,0.414656231081544,1.00883967391873,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,49.8487823310876,14.6626750904472,32.4707881787763,0,0,0,0,0,0,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58273670531796,44.4371253686351,60.4077977167495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.39669780522807,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.124192805882767,0,0.124980407962107,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0,0.115233987555779,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@PSMD13 | |||
}} |
Revision as of 05:45, 11 January 2014
Short description: | p3@PSMD13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PSMD13_5end |
Coexpression cluster: | C3131_CD8_Natural_Peripheral_CD4_Eosinophils_CD14_Basophils |
Association with transcript: | -449bp_to_ENST00000532097_5end |
EntrezGene: | PSMD13 |
HGNC: | 9558 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data