FFCP PHASE1:Hg19::chr11:64073006..64073017,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3471 | |||
|TSSclassifier=strong | |||
|UniProt=P11474,Q569H8,Q96I02 | |||
|association_with_transcript=-26bp_to_ENST00000406310,NM_004451,uc001nzq.1,uc001nzr.1_5end | |||
|description=CAGE_peak_3_at_ESRRA_5end | |||
|id=chr11:64073006..64073017,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.13e-09!70;CL:0000766!1.22e-09!76;CL:0002194!2.88e-09!63;CL:0000576!2.88e-09!63;CL:0000040!2.88e-09!63;CL:0000559!2.88e-09!63;CL:0000557!1.18e-08!71;CL:0002009!1.84e-08!65;CL:0000066!1.94e-08!254;CL:0000763!4.80e-08!112;CL:0000049!4.80e-08!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.11e-09,72;CL:0000839,6.03e-09,66;CL:0002194,1.76e-08,59;CL:0000576,1.76e-08,59;CL:0000040,1.76e-08,59;CL:0000559,1.76e-08,59;CL:0000557,7.24e-08,67;CL:0002009,1.27e-07,61;CL:0000763,1.48e-07,108;CL:0000049,1.48e-07,108;CL:0000066,1.69e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.56e-08!112;UBERON:0002390!1.74e-07!102;UBERON:0003061!1.74e-07!102;UBERON:0002371!7.46e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.74e-08,108;UBERON:0002390,1.01e-07,98;UBERON:0003061,1.01e-07,98;UBERON:0002405,7.75e-07,93 | |||
|phase1_expression=1.09007027562334,1.92690471501885,0.704772020479856,0,2.68176656656373,1.74467704820074,2.53299878168311,0.631719873426831,3.13422753839806,1.22866968250754,4.18680700783456,1.52908960491121,1.84636884759917,0.990130823680373,0.331397375727916,2.01697543935533,0,1.46062018077475,0.487932798790507,0.738726348460727,0.612002073732759,1.25381888591235,0.572471974262113,0.136874425072884,0.376627918784408,1.68109492645493,1.64201178899891,2.51874500203774,0.393364276848904,0.383829398097213,1.08371286321253,4.59710612239464,2.409647350226,2.9580320813343,1.00707360754392,3.41206157969812,0,1.66198622559563,0.601633342410425,1.95309783644267,4.70222495903841,1.6194683300949,2.83333124397605,3.19876125315042,1.88937971844405,2.66842467306598,3.48643555358527,1.6446715520873,1.23882548358041,3.16461631554365,1.2808035326455,1.89185783910868,4.82643953031266,0.645484683583826,1.35426486594342,3.57660445130949,0.545812300115692,1.79778787556068,2.14258724659632,1.60464513538047,0,1.9791078011203,1.39624560335142,0.426224750532694,2.90209238628584,1.13477044938228,0.622822248995575,2.76373531782418,1.5644487552606,3.04064382587163,2.42159801053347,0.368277635987565,0.632924774881769,1.69004229049553,3.18906449947565,1.25795187305026,2.2465726229299,1.65194582125657,0.803627933485401,1.99508920618874,3.58050018958362,2.00930569141097,0,1.09227722252426,0.889509253863555,0.853460445133014,0,0.574752439954483,1.32208974556972,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.786021525498329,0.411202997999018,1.5046784585161,0.651844533267181,0,1.94826728407911,2.67385096524417,0.294605907474837,0.664601683750863,0.270803863765016,2.68991771423918,2.9913649938772,1.80881695064044,1.93445012450094,0.579606171470105,0.296573126324121,0.535081656179426,0,1.13309342697566,0,0.34362744548263,0,0,1.30216690771284,0,0.752875595388864,0.511946444617674,1.24930726552346,0.947109008176067,0,0,0.802320587350522,0.434473211648397,0,0.670700859703636,0.511450247374121,0.722878304769133,1.00267582127178,1.59331170856906,0,0.973269740605272,1.13441780596881,0.443458794925128,0.87834785693126,1.24430121722827,4.00724817121796,5.19098219898201,3.24547393654683,3.65672448328461,3.98873881556595,0.953962497221368,0.571994910780128,0,1.78886166630035,1.72046919021225,0.694281003215189,1.13061588384802,0.838998872419812,0.825354125820202,0.626984899610432,2.06733407335463,1.06729878806013,1.67360306382335,1.61131726843659,2.28081631715554,2.68468263302986,1.83831540172934,1.62028389576352,0.803697554556718,1.12264686313085,1.35133776579987,1.53316637465883,0.949265659568129,2.38162267109529,10.5424333948851,7.75560528296651,2.18047026071267,0,1.2663051166458,1.19168262731897,0.860509862246441,0.354668382198357,0.560677600142307,2.1349799145941,1.97334038733728,0,1.34710672069688,0.817309515567294,0.605429710579726,1.72852777344,1.87457145467037,1.24864030732128,0.570471821544449,1.19558944441441,1.40921398372518,0.809364721840658,1.12360645361799,1.42907919878425,0.859840221182376,0.929932030581889,0,0.741800787835671,0,1.43723628363248,0.841680569770331,0.500474079487857,0.277064115484183,0.438977620880838,0,1.05166641234618,0.907457465280168,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0.206105058476878,0,0.558350568994769,1.0126579934476,0.779496041289589,0.252433774244115,0.828449087780694,0.484938170456436,0,0.604512589365842,0.67824236924195,2.31913023795956,1.90922284413584,2.00763216772303,0.609868530647977,0.397589304964456,1.16193942869518,0.621966330092223,0.504641701751257,1.09493207722749,1.56449532329816,1.92972281457866,0,0.464367928031979,0,1.0647612003586,0.505754070234305,1.44606617930089,1.21323370005633,1.74303555273925,1.42362371466658,1.75280700608214,1.37355025587742,2.30848294167834,1.4763109092493,1.40241773803446,1.6462960453256,1.47008711385542,2.53510069643662,1.96565443335525,4.13552934676983,0,1.59884970106048,0.686271241194102,4.06076056011915,4.49607013030478,1.91005047582099,1.574003567695,0.651616610620649,2.07986957055916,0,0.463721619900307,0.469634776943287,2.7429625074604,2.31492756288305,1.90254152234598,0,0.858486162094873,3.20082107913617,2.80805118167085,2.52672975890838,0.93733833986777,2.18376766658517,1.13420077793909,1.79117045405697,2.61570544662566,3.06706143332169,0,2.72950145441001,1.86595303986695,1.8735593944205,0.88369703398466,2.47641787739459,3.4378958300245,7.03304683260282,8.55362230113526,2.87916979569306,2.40274446275134,1.71495859578347,0.897048674762886,1.30788020649984,0.95339771567235,0.646358578788889,3.57656445851882,4.22651376278,0.797814349754612,2.08014873822732,1.28603687131071,0,2.1313774321288,0.428933980974443,2.71310802695722,1.64648067356154,1.62868092146868,2.48774364119782,3.95975936466715,2.1100756394171,1.74306691720059,1.09970290300263,2.43247561282381,4.52031382288914,4.21667878966063,1.67737398844108,1.14861935834114,0,1.73737568001095,1.2328579353023,1.25342674267927,1.12085143993527,0.591092280605782,0.431255149719035,0.77005821767849,0.508189248444927,2.60279707715243,0.773288812777695,1.50764638800914,0.637938751653163,1.49801404789436,5.9832291840805,3.31532410748828,0.36807447515742,1.00034104211935,0.271265023699736,1.66376689224646,0.892144943985809,1.26161932027148,0.585707074963566,0.601892199455438,2.27407504055985,3.10419213877515,0,0.737476674166813,0.60818530127658,3.72022199179207,0.343143423810856,1.24060815673732,1.2942852049117,1.17400313583789,2.42502057157008,1.66435439510497,2.11673205330776,0.496215615637554,0.920771839728375,0.841980283299221,0.640695746278505,1.02341449813341,0.321707842287215,1.48418066444991,0.616838775210622,1.06537035187876,0.492762936082855,0.519254429183621,0.929683027679674,2.41718899183244,1.80455823272956,3.31491560169227,0.803701137152247,0.728364672026868,1.18011973463482,0.902399225814824,0.693138033939733,1.56869953835371,1.46139224653261,1.16106791782163,2.27466768141793,1.19065593693561,1.94324324491925,1.54227252690289,0.812839312631559,2.50844886927427,2.03901018436031,4.15538004464362,1.79099803777743,2.41185864310528,3.13722541229881,1.53870075069834,0.328014645699706,1.62689197332152,3.19427136107939,1.28197250745681,1.15513299888823,2.87132768998086,1.95018073810956,0,0.676695028044854,1.84858340537573,1.22802939780904,0.827019434907183,0.429680979473094,0.870100163485371,2.13066568540252,0.712256285173899,1.65284915360978,1.92190067365106,0.765676274967505,2.2254711788221,0.929691098594572,0,0.6970372701606,2.15623506123262,2.12922412126809,2.60979897622522,2.22389062924704,1.00187420719394,1.86079184679834,0.316379424718726,1.71567174531442,2.04718233049067,0,0.95460974377781,1.56989728039846,0.539617372749944,0,0.706874414074119,1.61745985258653,0,2.52755073743389,0.975267478179181,0.731140468893853,0,0.409499734223957,0.848432591722276,2.26016233240486,3.30819206127675,1.32687795048244,1.75380354101505,0,0,1.62328301570163,0.92947049429925,0,1.00387946542836,1.08073945114433,2.1400263088875,1.06428319221179,0.844430541190656,0.987884678879706,2.27683904259429,2.0996083214699,3.56021817084395,4.02181365321472,5.44454924306613,2.07116361708914,3.01353760869861,3.36942951335251,4.43430153536676,2.52695740227655,1.52234282769651,6.117097657139,4.5571774973933,3.57347663186684,3.70226045777575,1.94541993357815,2.70015718619057,6.34500141035416,1.06824071127473,3.84991942105343,2.20536194382929,0.743212700502875,0.721346064882224,0.142283686696828,0.797131363644112,0.997896857164083,0.5745161103971,0.423347165447766,1.29848776109822,0.561594356226918,2.05411211129873,1.25343916618419,0,1.35433422241283,1.2847046008296,0.403599414382095,0.851692475380653,0.343505344755765,2.15068535015921,2.68411329470899,2.83643540910244,2.14926904942244,1.39203086947621,1.23087398947712,2.70455678475983,0,2.81974010175699,1.8714054040822,1.17206543417515,0.849523652246594,1.78309414843965,1.13654458722565,1.19372242368845,2.67268212749375,0.307160702099232,0.994147647766298,0.562677665642051,0.779160935160341,0.988823245360557,0.844501632511974,0.597743964753209,1.38141957765574,1.51159648712566,0.613612095012929,1.6001024709939,1.24415835064723,2.3365771298305,4.29650819221462,2.04628948090749,0.887790650732402,0,0,0,1.02044907978036,0,1.5625665665114,1.31189999994294,2.89999830173917,2.73104275885199,1.77977555204936,0.709163045303809,2.75794698593172,0.583209226766509,0.868124974666461,2.65722415744152,0.60298219312704,1.52581736317083,1.43753037910592,1.18219047581419,0.438770794307945,1.63407695278485,1.81250867562184,1.00035336054936,0.455768223388005,4.15015027898508,1.79515288819544,1.4124158349861,1.5950057986596,2.28993983504656,1.06606955203727,0,1.72678282034527,0.831058409500782,2.25595660617181,2.35275041181287,2.68514539161348,2.46679852541441,1.27149263184303,1.68798451622422,0.326465616318295,1.55488378577335,0.865554558968364,6.96683351754953,3.80367527364358,0.611030144933625,0,1.97702302314405,0.730953646538188,1.48282492557489,0.802577647298789,0.937057782901357,1.094728735294,1.17398771359254,0.242780379534093,1.57833761139756,2.41981432097328,0.30607276163049,1.51647791108371,0.751617097072463,1.7626992537532,0.664653872707185,1.323967823502,1.56966459203613,0,0.284609546029793,0.970722711091971,1.04135843001079,0.587954384486266,2.08942095792966,1.39781334593624,0.343972064943233,2.80593360738347,2.77739404927505,2.95615645391553,2.42472541221049,0.882561266915003,0.677942222341597,1.50746117111426,2.38457534043588,1.32952671507345,1.75996244461323,0.881747022766871,1.92107695265417,1.79828648623917,1.87317542300338,0.80175617316141,0.514784993585894,4.03353434366819,0.124252535565433,2.35694034616795,0.67952103036807,0.523014231561666,0.611989305817931,1.15580235960608,3.60252173225874,0.547621515567972,3.83239764200917,0.859530882839914,1.31443677139657,0.558564802544508,0.229160424011684,2.87149209830726,2.59582700648688,5.57993862577542,4.01708623395371,1.34366944973453,1.44119953416961,0,1.10296455230113,1.07140615895516,0.943649613958588,1.96854963029498,1.52411997718412,2.38568906942791,0.681017030557878,2.41129722697529,0.825236619583403,2.07720169014593,0.449947783103001,0.77380195455795,0.668245123238271,2.34804281319486,4.4131196087551,1.57363764404994,0.528001682597033,1.07572403599707,0.767660789277781,3.57347663186684,1.32418394073086,1.017074150619,1.62899880526114,2.5926644736038,0.979762080328227,1.19730191562487,0.985110248992068,0.851940108927109,1.01980882368113,4.25001477666439,0,1.68067843270016,1.45455861916959,2.22412889249628,0,1.17466153824464,0.314408610199332,1.65695622138878,0.496166021811951,2.37133958277533,0.60896299190448,0.638341257770182,1.63205341010842,1.5041393641362,0.612691153526923,2.62298104567844,1.09937867375164,0.886068179966986,0.488105059607853,1.3771002377715,0.573409195690071,1.77486482458964,1.17983165588629,0.138348634936231,2.24964734331792,3.1846314683746,1.42732666772484,2.11739237728355,0.936669811613763,2.60857851499485,0.597019211547496,0.233713309847224,1.10961172300523,1.32582103692562,1.25783950876288,0,1.83072054717539,1.20984739010591,0.466311601748341,0.887130899937803,0.955780602982214,0.899606224327209,0.621051827505038,0.414706207840855,1.32920857278997,0,0.751288044986092,0.761610424337591,0.813741466409323,1.27294061441792,0.859284456339908,0.928067519756987,0.398095888698616,0,0.686791410365586,0.673498977531838,0,0.963099152036517,0.857766365499703,0.260994291965212,0.453411851024545,0.694567422971502,0.489473409012935,0.895444205407437,1.23520578864389,1.09642024789354,1.06013487567529,0.964570191354574,1.01365464391844,0.76872455576384,1.72715170865599,1.51929978088691,0.967809053062115,0.194860308839388,1.32864840313363,1.63565394255844,0.982829546539238,0.737318726261158,2.53574548030352,0.79994958341972,0.853533837553127,1.89436477626897,0.567515953566836,1.10463570151104,4.33626473930278,3.73246356019784,0.383683113910955,0.539124056983409,0.157265941855896,0.982886743728125,2.54598794931038,0.212574920101683,0.867550349813015,0,0.636008701306837,1.02520268501629,2.40171224485641,0.705351887381368,1.2249819094128,0.899209151350433,2.8339315265117,1.43670473151436,1.02558182120378,1.26035848110859,0.96820153449905,0.322951291263702,0,2.45369296252564,2.12345502025933,2.20114318226015,3.00366731990879,0.762764190934334,2.0710797781803,0.994581110581374,0.300841313397029,0.60511520611056,0.781514011233092,2.09525355585138,0.982631505060581,0.591424344868181,1.35075169236789,0,2.06686796501184,1.26831620387814,1.64092442705466,2.19303106742873,0.496211178389294,0.351742488719241,2.29972369751271,1.07140367175657,1.00885116665647,2.42786241694653,0.227662191351298,1.86274977341542,1.61327582578091,0.514464028312255,1.01954599465248,1.64431933907123,0.945550727071746,1.66847102838104,1.02041020705668,0.785577949580009,1.12108865325516,2.73947616152849,0.431855182437243,0.47775168788705,1.21510125100316,0.94808167039636,1.27865567904938,2.60787408453869,0,2.07216164163037,4.95083583572455,2.07377898544228,2.58136415292167,1.41998400876678,1.44862788090568,2.54032230114557,1.14553434272025,1.24082554265728,0.955538938977433,1.11855431797792,1.3741032706134,1.95068679971631,1.29485767437579,5.0304775359561,0,0.485710993059139,1.16969731731053,0.397901550322736,0.118920090777569,0.33883824611688,0.219881033490858,3.77407108916684,5.94241017431174,1.5299169235277,2.82190377816914,1.22574160876953,4.24217784782927,1.57046773691956,0.594092800654172,0.8453114551668,1.0195626881269,2.06764619555678,2.2560260790752,1.29923502702408,2.14264726326789,4.2347384605883,3.04917193418839,0,2.75237570042724,1.57673541466596,1.57771562193185,1.29183831362738,0.436350690340377,2.645134202577,1.85997509083376,2.31087814315709,1.73050624849516,0.252332849670158,0.764859003745869,1.26698501011437,1.93778776509765,1.3360870263278,1.19463369395298,3.50990555009325,1.13668047327359,0.535928260312357,0,0.517164979309476,1.27940389140589,0.714193294391221,1.0334225573761,0.682821857254437,1.45771421354797,1.33659032384146,2.02117188958219,1.95945073107265,1.36893320434112,2.6940821205835,1.79305513481691,1.33064142618405,1.22104902916462,1.70763753404345,0,1.3473780315988,4.69281884806909,0,0.406896178315738,0.665756774185513,1.00636896795513,1.9234109538194 | |||
|short_description=p3@ESRRA | |||
}} |
Revision as of 08:24, 11 January 2014
Short description: | p3@ESRRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ESRRA_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000406310, NM_004451, uc001nzq.1, uc001nzr.1_5end |
EntrezGene: | ESRRA |
HGNC: | 3471 |
UniProt: | P11474Q569H8Q96I02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.11e-09 | 72 |
myeloid lineage restricted progenitor cell | 6.03e-09 | 66 |
monopoietic cell | 1.76e-08 | 59 |
monocyte | 1.76e-08 | 59 |
monoblast | 1.76e-08 | 59 |
promonocyte | 1.76e-08 | 59 |
granulocyte monocyte progenitor cell | 7.24e-08 | 67 |
macrophage dendritic cell progenitor | 1.27e-07 | 61 |
myeloid cell | 1.48e-07 | 108 |
common myeloid progenitor | 1.48e-07 | 108 |
epithelial cell | 1.69e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.74e-08 | 108 |
hematopoietic system | 1.01e-07 | 98 |
blood island | 1.01e-07 | 98 |
immune system | 7.75e-07 | 93 |