FFCP PHASE1:Hg19::chr12:7242006..7242036,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:7242006..7242036,- | |||
|id=chr12:7242006..7242036,- | |||
|ontology_enrichment_celltype=CL:0000055!6.90e-14!180;CL:0000057!2.06e-10!75;CL:0000136!4.75e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.30e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.08e-09,15;CL:0000187,5.23e-07,55;CL:0000680,5.86e-07,58;CL:0000056,5.86e-07,58;CL:0000355,5.86e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.01e-08!115;UBERON:0007100!3.51e-08!27;UBERON:0002385!1.38e-07!63;UBERON:0001015!1.38e-07!63;UBERON:0000383!1.38e-07!63;UBERON:0002100!1.60e-07!216;UBERON:0000475!1.82e-07!365;UBERON:0000948!3.79e-07!24;UBERON:0005498!3.79e-07!24;UBERON:0004140!3.79e-07!24;UBERON:0009881!3.79e-07!24;UBERON:0004141!3.79e-07!24;UBERON:0003084!3.79e-07!24;UBERON:0007005!3.79e-07!24;UBERON:0004139!3.79e-07!24;UBERON:0004291!3.79e-07!24;UBERON:0000481!5.51e-07!347;UBERON:0001134!8.05e-07!61;UBERON:0002036!8.05e-07!61;UBERON:0003082!8.05e-07!61;UBERON:0005256!8.76e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.72e-09;9!UBERON:0000042;4.72e-09;9!UBERON:0003688;1.21e-07;6!UBERON:0002358;1.21e-07;6!UBERON:0003684;1.21e-07;6!UBERON:0001178;1.21e-07;6!UBERON:0004905;2.28e-07;8!UBERON:0000982;2.28e-07;8!UBERON:0004770;2.28e-07;8!UBERON:0002385;6.74e-07;31!UBERON:0001015;6.74e-07;31!UBERON:0000383;6.74e-07;31!UBERON:0001013;8.22e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,6.04e-14,160;UBERON:0009142,6.04e-14,160;UBERON:0005256,2.34e-12,122;UBERON:0002100,5.47e-12,199;UBERON:0002385,1.40e-09,64;UBERON:0001015,1.40e-09,64;UBERON:0000383,1.40e-09,64;UBERON:0001134,2.05e-08,62;UBERON:0002036,2.05e-08,62;UBERON:0003082,2.05e-08,62;UBERON:0007023,2.16e-08,114;UBERON:0004457,5.01e-08,12;UBERON:0000042,5.01e-08,12;UBERON:0003688,1.75e-07,6;UBERON:0002358,1.75e-07,6;UBERON:0003684,1.75e-07,6;UBERON:0001178,1.75e-07,6;UBERON:0007524,1.75e-07,73;UBERON:0004905,2.66e-07,8;UBERON:0000982,2.66e-07,8;UBERON:0004770,2.66e-07,8;UBERON:0002329,3.64e-07,71;UBERON:0003059,3.64e-07,71;UBERON:0007282,3.64e-07,71;UBERON:0004290,3.64e-07,71;UBERON:0009618,3.64e-07,71;UBERON:0003077,5.74e-07,72;UBERON:0007285,5.74e-07,72;UBERON:0001013,7.30e-07,14;UBERON:0003101,9.53e-07,22;UBERON:0000079,9.53e-07,22 | |||
|phase1_expression=2.18014055124668,7.27941781229343,5.49722175974288,6.00439790118782,16.0905993993824,8.72338524100369,2.53299878168311,6.94891860769514,18.2829939739887,0,0,0,0,1.23766352960047,2.98257638155124,2.01697543935533,1.20538905604795,1.46062018077475,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0.670700859703636,0.511450247374121,2.53007406669196,0.50133791063589,5.21447468258965,0,4.86634870302636,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0.993943903390637,0.633152558322899,0.529636723252875,15.4891775204359,2.12801029319014,1.68203280042692,0,0.49333509683432,0.622422070799533,0.404132016209064,0.490385709340376,0.605429710579726,0.576175924479999,0.468642863667593,0,0,0.597794722207204,0,0.161872944368132,0,0,0,0.413303124703062,5.94001428641027,9.39614331258516,0,0.718618141816238,0,0,0.554128230968366,0.877955241761676,0.30648779579902,2.85452311922534,0,0.717558542755448,1.92201649936711,1.05965950579781,0.300091096084402,0.412210116953756,0.772921620136887,0.558350568994769,0.168776332241266,0.487185025805993,0.757301322732344,0.828449087780694,6.30419621593366,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,2.57296375277154,0,1.85747171212792,2.88751792667834,0.118306800039844,0.337169380156203,0,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0,0,0.4115740113314,4.41026134156626,77.3205712413168,56.0211513506247,69.7132089884057,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0.144119953416961,0.25248486685276,0.063497894292169,0,1.17217447210047,1.71072446022705,0,0.300343057843917,0,0,0.87192013766656,0,0.775630294546667,7.15312891703765,0,0,0,0,0,0.266422179016099,1.42977993658148,1.62786481617433,0.823240336780769,0,2.84313558994037,0,0.602878754119172,0,0.499864955910285,0,0,0,0,2.29723871668228,0,0.289562613335158,1.02738161275192,0.358121926479791,0.112085143993527,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,3.0672872929785,1.50051156317903,1.08506009479894,2.28767947683888,1.42743191037729,0.788512075169673,2.22568688486155,3.00946099727719,13.6444502433591,13.4514992680256,0,0.184369168541703,2.43274120510632,0.391602314925481,2.05886054286514,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,1.79394808957981,1.02341449813341,1.12597744800525,2.96836132889982,0,0.710246901252508,0.328508624055237,1.03850885836724,0.348631135379878,0,0,0,2.18147451512753,1.63882051206045,8.1297137274843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1048079335219,0.0915694648183434,0,0,0,6.42735719376638,1.06337790121334,0.616194468458578,1.38153307253517,0,1.28904293841928,2.17525040871343,0.511359764496605,1.69160867728801,0,0,0,0,0,2.20368642781448,0,0.924100740528266,0,0,0,0,0.372158369359667,0,2.47819252100972,0,3.85145089230528,0.636406495851874,0,0.539617372749944,2.19629623788844,1.41374882814824,0,1.58510321173008,0,1.46290121726877,4.38684281336312,2.11300293513511,2.45699840534374,4.52497382251881,3.39024349860728,0,1.32687795048244,2.19225442626881,1.73632660280006,1.31178950409327,0,0,0,0,0,0,0,9.71095122369255,20.7455782564738,0.379473173765715,0,0,0,0,17.3224593429274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.05794985995417,0,0,0,0,0,0,0,0.140669416410513,0.333926115068718,0,0.211125408127993,4.18420775327246,0,0,0,0,0.311039587661807,0,0,0,4.93217028184668,0,0,0.969332746095218,0.371072392647405,0,0,0,11.5999932069567,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0,0,0.658156191461918,0.10893846351899,0,5.00176680274681,1.48124672601102,0,0,0,0,0.366390373607449,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,3.18447232212021,3.05515072466813,0,0,0,0,2.40773294189637,0.234264445725339,0,0,0,1.97292201424695,1.20990716048664,0,4.04394109622323,0.150323419414493,0,0,0,0,0,0,0,0,0,0,11.1825067674899,0,0,0,0,7.27417623663146,0,2.03382666702479,0,0,0,0,0.0801588202515337,4.4825128895264,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0,0,0.410716136675979,0,0.429765441419957,0,4.18923601908381,1.60412296808179,7.89660327034495,0.399358000997982,1.71690419254628,1.33902874465124,0.403100834920358,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.0607495566580247,0,1.33969702408637,0.0524545881349981,0,0,0,11.4351252219739,7.94510364438518,0,1.08599920350743,1.72844298240254,0.653174720218818,0,0,1.19271615249795,0.113312091520126,86.7589223374248,3.97520666736664,0.12928295636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| |||
|short_description=p@chr12:7242006..7242036,- | |||
}} |
Revision as of 11:52, 11 January 2014
Short description: | p@chr12:7242006..7242036, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:7242006..7242036, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.08e-09 | 15 |
muscle cell | 5.23e-07 | 55 |
muscle precursor cell | 5.86e-07 | 58 |
myoblast | 5.86e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.86e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 6.04e-14 | 160 |
entire embryonic mesenchyme | 6.04e-14 | 160 |
trunk mesenchyme | 2.34e-12 | 122 |
trunk | 5.47e-12 | 199 |
muscle tissue | 1.40e-09 | 64 |
musculature | 1.40e-09 | 64 |
musculature of body | 1.40e-09 | 64 |
skeletal muscle tissue | 2.05e-08 | 62 |
striated muscle tissue | 2.05e-08 | 62 |
myotome | 2.05e-08 | 62 |
adult organism | 2.16e-08 | 114 |
cavity lining | 5.01e-08 | 12 |
serous membrane | 5.01e-08 | 12 |
omentum | 1.75e-07 | 6 |
peritoneum | 1.75e-07 | 6 |
abdominal cavity | 1.75e-07 | 6 |
visceral peritoneum | 1.75e-07 | 6 |
dense mesenchyme tissue | 1.75e-07 | 73 |
articulation | 2.66e-07 | 8 |
skeletal joint | 2.66e-07 | 8 |
articular system | 2.66e-07 | 8 |
somite | 3.64e-07 | 71 |
presomitic mesoderm | 3.64e-07 | 71 |
presumptive segmental plate | 3.64e-07 | 71 |
dermomyotome | 3.64e-07 | 71 |
trunk paraxial mesoderm | 3.64e-07 | 71 |
paraxial mesoderm | 5.74e-07 | 72 |
presumptive paraxial mesoderm | 5.74e-07 | 72 |
adipose tissue | 7.30e-07 | 14 |
male organism | 9.53e-07 | 22 |
male reproductive system | 9.53e-07 | 22 |