FFCP PHASE1:Hg19::chr12:13084771..13084773,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:13084771..13084773,+ | |||
|id=chr12:13084771..13084773,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.91e-15!254;CL:0000223!1.02e-07!59;CL:0000076!3.02e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000319;6.76e-18;1!CL:0000159;1.27e-09;2!CL:0002097;1.27e-09;2!CL:0000174;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,7.37e-18,1;CL:0000159,1.33e-09,2;CL:0002097,1.71e-09,2;CL:0000066,5.04e-07,253;CL:0000174,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.27e-09;2!UBERON:0010056;1.27e-09;2 | |||
|ontology_enrichment_disease=DOID:0050687!2.23e-28!143;DOID:305!1.55e-26!106;DOID:162!7.19e-19!235;DOID:14566!1.75e-18!239;DOID:1749!3.71e-09!14;DOID:7!1.88e-08!39;DOID:299!6.91e-08!25;DOID:3119!5.34e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;6.76e-18;1!DOID:3030;6.76e-18;1!DOID:3603;6.76e-18;1!DOID:4929;1.27e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.37e-18,1;DOID:3111,1.44e-17,1;DOID:3603,1.44e-17,1;DOID:4929,7.98e-10,2;DOID:305,1.99e-09,106;DOID:0050687,8.09e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!5.63e-13!155;UBERON:0001555!5.63e-13!155;UBERON:0007026!5.63e-13!155;UBERON:0004119!2.66e-12!169;UBERON:0000925!2.66e-12!169;UBERON:0006595!2.66e-12!169;UBERON:0003929!1.40e-10!54;UBERON:0004921!4.09e-10!129;UBERON:0004185!4.09e-10!129;UBERON:0005911!3.11e-09!82;UBERON:0000077!9.33e-09!130;UBERON:0002530!3.06e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;6.76e-18;1!UBERON:0003703;6.76e-18;1!UBERON:0001174;6.76e-18;1!UBERON:0004914;6.76e-18;1!UBERON:0002394;1.57e-17;4!UBERON:0003928;1.57e-17;4!UBERON:0002423;6.24e-11;25!UBERON:0002294;1.94e-10;7!UBERON:0001173;1.94e-10;7!UBERON:0000058;1.42e-07;10!UBERON:0002369;7.92e-07;3!UBERON:0001723;7.92e-07;3!UBERON:0001235;7.92e-07;3!UBERON:0006858;7.92e-07;3!UBERON:0002114;7.92e-07;2!UBERON:0001033;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.66e-18,1;UBERON:0003703,2.66e-18,1;UBERON:0001174,2.66e-18,1;UBERON:0004914,2.66e-18,1;UBERON:0008835,1.76e-12,22;UBERON:0003894,1.76e-12,22;UBERON:0002394,2.91e-12,6;UBERON:0003928,2.91e-12,6;UBERON:0009854,5.94e-12,23;UBERON:0007499,5.07e-11,25;UBERON:0009497,5.07e-11,25;UBERON:0000015,5.07e-11,25;UBERON:0002423,5.07e-11,25;UBERON:0006235,5.07e-11,25;UBERON:0004161,5.07e-11,25;UBERON:0009856,1.31e-10,26;UBERON:0002294,1.77e-08,9;UBERON:0001173,1.77e-08,9;UBERON:0004912,1.77e-08,9;UBERON:0002114,5.80e-07,2;UBERON:0001723,7.28e-07,3;UBERON:0001033,7.28e-07,3;UBERON:0010056,7.28e-07,3;UBERON:0002369,9.64e-07,3;UBERON:0001235,9.64e-07,3;UBERON:0006858,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0.460404944679482,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.989838023675989,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0.71623345421307,0.296964680832639,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.996239941255349,0,0,0.20453736500431,0,0,1.70749867179921,0.716084698702437,0,0,0,0,0,0,0,0,0.262379999988587,0,0.682760689712998,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.21787692703798,0.975966209950223,0.153900517007594,0.113942055847001,0,0.269272933229316,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0,0.995261931078505,0,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0.609414446062818,0,0,0.290268993867255,0,0,0,0,0,0.137041924646751,0,0,0.391102765469606,0.480952921509202,0,0.39961921916426,0.288180834308212,0,0.171594997861965,0.14405479798815,0,1.17847017308398,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0.360299883542404,1.16495949527454,0.236349546921671,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0.670869375198532,0,0.157363764404994,0.950403028674658,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.427149650270779,0,0.828478110694391,0.496166021811951,0.197611631897944,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.941063278792687,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,1.07220795687463,0,0.906823702049089,1.389134845943,0.244736704506468,0.179088841081487,0.617602894321944,0.219284049578707,0,0.771656153083659,0.675769762612291,0,0,0,0,0.194860308839388,0,0,0,1.2288645437686,1.05656061679314,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.509197589862076,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.235939446695481,0.183428598521679,1.27078232765372,0,0,0,0,0,0.781514011233092,0,0.818859587550484,1.92212912082159,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.111231401892069,0.156986185701028,0,0.560544326627578,0,0.431855182437243,0,0.285906176706625,0,0.464965701472501,0,0.801711364730253,0.414432328326074,0,0,0,0,0.0852134047591577,0,0.4582137370881,0.31020638566432,0,0,0.490751168076215,0.487671699929078,0,0,0,0,0,0.198950775161368,0,0,0,0,0.463044948647668,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0.401206833445841,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.380095503034311,0.305966489225945,0.534434810531121,0.18378979906969,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.186224142887574,0.448527450322454,0.0636471582781649,0.606351566874658,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0.960546112899439,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p@chr12:13084771..13084773,+ | |||
}} |
Revision as of 12:20, 11 January 2014
Short description: | p@chr12:13084771..13084773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:13084771..13084773, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 7.37e-18 | 1 |
seromucus secreting cell | 1.33e-09 | 2 |
cortical cell of adrenal gland | 1.71e-09 | 2 |
epithelial cell | 5.04e-07 | 253 |
steroid hormone secreting cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.66e-18 | 1 |
extrahepatic bile duct | 2.66e-18 | 1 |
common bile duct | 2.66e-18 | 1 |
duodenal papilla | 2.66e-18 | 1 |
hepatic diverticulum | 1.76e-12 | 22 |
liver primordium | 1.76e-12 | 22 |
bile duct | 2.91e-12 | 6 |
digestive system duct | 2.91e-12 | 6 |
digestive tract diverticulum | 5.94e-12 | 23 |
epithelial sac | 5.07e-11 | 25 |
epithelium of foregut-midgut junction | 5.07e-11 | 25 |
anatomical boundary | 5.07e-11 | 25 |
hepatobiliary system | 5.07e-11 | 25 |
foregut-midgut junction | 5.07e-11 | 25 |
septum transversum | 5.07e-11 | 25 |
sac | 1.31e-10 | 26 |
biliary system | 1.77e-08 | 9 |
biliary tree | 1.77e-08 | 9 |
biliary bud | 1.77e-08 | 9 |
duodenum | 5.80e-07 | 2 |
tongue | 7.28e-07 | 3 |
gustatory system | 7.28e-07 | 3 |
future tongue | 7.28e-07 | 3 |
adrenal gland | 9.64e-07 | 3 |
adrenal cortex | 9.64e-07 | 3 |
adrenal/interrenal gland | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.37e-18 | 1 |
cystadenocarcinoma | 1.44e-17 | 1 |
mucinous cystadenocarcinoma | 1.44e-17 | 1 |
tubular adenocarcinoma | 7.98e-10 | 2 |
carcinoma | 1.99e-09 | 106 |
cell type cancer | 8.09e-07 | 143 |