FFCP PHASE1:Hg19::chr12:51717984..51717997,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1053 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-36bp_to_ENST00000452142_5end | |||
|description=CAGE_peak_5_at_BIN2_5end | |||
|id=chr12:51717984..51717997,- | |||
|ontology_enrichment_celltype=CL:0000037!6.56e-45!172;CL:0000566!6.56e-45!172;CL:0002032!8.84e-42!165;CL:0000837!8.84e-42!165;CL:0000988!9.19e-41!182;CL:0000738!5.20e-37!140;CL:0000763!3.66e-31!112;CL:0000049!3.66e-31!112;CL:0002031!8.22e-28!124;CL:0002087!1.25e-26!119;CL:0000766!3.69e-24!76;CL:0000839!7.14e-19!70;CL:0000557!1.99e-18!71;CL:0002194!1.47e-15!63;CL:0000576!1.47e-15!63;CL:0000040!1.47e-15!63;CL:0000559!1.47e-15!63;CL:0002009!9.45e-15!65;CL:0000039!7.19e-11!7;CL:0000586!7.19e-11!7;CL:0000838!6.14e-10!52;CL:0000542!1.31e-09!53;CL:0000051!1.31e-09!53;CL:0000134!2.03e-09!358;CL:0000084!6.93e-09!25;CL:0000827!6.93e-09!25;CL:0002320!8.90e-09!365;CL:0002057!9.64e-08!42;CL:0002274!2.39e-07!5;CL:0000457!2.39e-07!5;CL:0002191!2.39e-07!5;CL:0000097!2.39e-07!5;CL:0000831!2.39e-07!5;CL:0002028!2.39e-07!5;CL:0000451!7.19e-07!10;CL:0000860!7.34e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.13e-24;7!CL:0000586;9.13e-24;7!CL:0002541;2.80e-14;3!CL:0000094;4.76e-09;8!CL:0000097;1.93e-08;5!CL:0000235;4.21e-07;6!CL:0000840;4.21e-07;5!CL:0000775;7.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.97e-24,7;CL:0000586,9.97e-24,7;CL:0002541,2.63e-14,3;CL:0000763,3.52e-14,108;CL:0000049,3.52e-14,108;CL:0000766,2.32e-13,72;CL:0000037,3.29e-10,168;CL:0002032,7.56e-10,161;CL:0000837,7.56e-10,161;CL:0000988,2.05e-09,177;CL:0000094,4.48e-09,8;CL:0000097,2.95e-08,5;CL:0002028,2.95e-08,5;CL:0000839,3.18e-08,66;CL:0000557,4.59e-08,67;CL:0000738,5.03e-08,136;CL:0000235,2.84e-07,6;CL:0000840,3.52e-07,5;CL:0001029,3.52e-07,5;CL:0000775,6.96e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.86e-14!51;DOID:0060083!3.86e-14!51;DOID:1240!7.59e-14!39;DOID:8692!1.63e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.25e-07;22!DOID:2994;4.25e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.36e-07,22;DOID:2994,4.36e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-29!102;UBERON:0003061!2.06e-29!102;UBERON:0002193!2.56e-27!112;UBERON:0002371!6.21e-16!80;UBERON:0001474!5.89e-14!86;UBERON:0002405!1.84e-13!115;UBERON:0000178!2.78e-11!15;UBERON:0000179!2.78e-11!15;UBERON:0000463!2.78e-11!15;UBERON:0004765!3.87e-10!101;UBERON:0001434!3.87e-10!101;UBERON:0002384!6.43e-08!375;UBERON:0004177!3.67e-07!7;UBERON:0003081!4.14e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.80e-14;3!UBERON:0000920;2.80e-14;3!UBERON:0000178;5.76e-14;15!UBERON:0000179;5.76e-14;15!UBERON:0000463;5.76e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.63e-14,3;UBERON:0000178,4.42e-14,15;UBERON:0000179,4.42e-14,15;UBERON:0000463,4.42e-14,15;UBERON:0002390,3.78e-13,98;UBERON:0003061,3.78e-13,98;UBERON:0002193,1.60e-11,108;UBERON:0002371,8.03e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.472264687882075,0.786728553697808,1.15148819429164,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0.651032612147555,1.56740831967947,0.32389366601898,0.77272670290256,0.436194716338694,0.755751887377619,0.485168122375632,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0,1.13477044938228,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0,0.336985893439485,0.750884464207532,0.964353520182481,0,0.19891667719909,0.182664153764634,0,1.09227722252426,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0.786021525498329,0.205601498999509,0.334372990781356,0,0.473447805734733,0,1.00269411196656,0,0.221533894583621,0.541607727530031,0.128091319725675,0.260118695119756,1.15106533222573,1.10540007114339,0.289803085735052,0.14828656316206,0.802622484269139,1.04535523804977,0.226618685395132,0.383220493601921,0,0.506039384039006,0.637130828648193,0,0,0.301150238155546,0.76791966692651,0,0.473554504088034,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,1.29818957461873,0.870648686496336,2.52620124985844,1.43094374583205,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,2.34004265139238,1.93220510975347,0,0,0,0,0,0,0.492663237895943,0.968532774145487,2.07328115540772,1.29707958075265,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.784596007954691,0.394061520403854,0,0.128343036279748,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,0.764637207142375,2.27858874869665,1.42939065274673,0.822724546172388,3.24236655596359,1.62009431171434,2.37937552888281,0,0,0,0,0,0.782560276832555,0.159426272728822,0.199579371432817,0.766021480529467,0.635020748171649,0,0.561594356226918,0,0,2.50634477090067,0,0.321176150207399,0.201799707191048,1.27753871307098,0.687010689511529,0.614481528616916,1.3420566473545,1.50164227540718,0,1.39203086947621,0,0.811367035427949,1.33228787199128,0,0,0,0,0.891547074219827,0,0.23874448473769,0,0,0,0,0,0.494411622680279,0,0,0.828851746593443,0,0,0,0,0,0,1.53471711068062,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,3.22789466143284,4.21860928725929,3.15077378573823,2.55200927785536,1.19076871422421,3.73124343213044,0,0.156980256395025,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0.599037001496973,0,0.446342914883745,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0.496166021811951,0.395223263795889,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.584580926518165,0.132864840313363,0,0,0,0,0.999936979274649,0.106691729694141,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,3.92860041722134,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67159787071134,1.3360870263278,5.05421947441647,0.752122617877125,0.151557396436479,0.267964130156178,0,0.103432995861895,0.213233981900981,0,0.193766729508018,0.620747142958579,0,0,0,0,0.342233301085281,0.336760265072938,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,1.28227396921293 | |||
|short_description=p5@BIN2 | |||
}} |
Revision as of 13:28, 11 January 2014
Short description: | p5@BIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000452142_5end |
EntrezGene: | BIN2 |
HGNC: | 1053 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.97e-24 | 7 |
germ cell | 9.97e-24 | 7 |
chorionic membrane mesenchymal stem cell | 2.63e-14 | 3 |
myeloid cell | 3.52e-14 | 108 |
common myeloid progenitor | 3.52e-14 | 108 |
myeloid leukocyte | 2.32e-13 | 72 |
hematopoietic stem cell | 3.29e-10 | 168 |
hematopoietic oligopotent progenitor cell | 7.56e-10 | 161 |
hematopoietic multipotent progenitor cell | 7.56e-10 | 161 |
hematopoietic cell | 2.05e-09 | 177 |
granulocyte | 4.48e-09 | 8 |
mast cell | 2.95e-08 | 5 |
basophil mast progenitor cell | 2.95e-08 | 5 |
myeloid lineage restricted progenitor cell | 3.18e-08 | 66 |
granulocyte monocyte progenitor cell | 4.59e-08 | 67 |
leukocyte | 5.03e-08 | 136 |
macrophage | 2.84e-07 | 6 |
immature conventional dendritic cell | 3.52e-07 | 5 |
common dendritic progenitor | 3.52e-07 | 5 |
neutrophil | 6.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.63e-14 | 3 |
blood | 4.42e-14 | 15 |
haemolymphatic fluid | 4.42e-14 | 15 |
organism substance | 4.42e-14 | 15 |
hematopoietic system | 3.78e-13 | 98 |
blood island | 3.78e-13 | 98 |
hemolymphoid system | 1.60e-11 | 108 |
bone marrow | 8.03e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.36e-07 | 22 |
germ cell cancer | 4.36e-07 | 22 |