FFCP PHASE1:Hg19::chr12:66043314..66043321,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:66043314..66043321,+ | |||
|id=chr12:66043314..66043321,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.75e-15!246;CL:0002321!3.18e-15!248;CL:0002371!2.21e-13!591;CL:0000144!1.50e-12!625;CL:0000680!3.13e-12!57;CL:0000056!3.13e-12!57;CL:0000355!3.13e-12!57;CL:0000055!3.63e-10!180;CL:0000548!1.67e-09!679;CL:0000004!1.67e-09!679;CL:0000255!1.67e-09!679;CL:0000012!2.39e-09!682;CL:0000222!2.61e-09!119;CL:0000187!3.66e-09!54;CL:0000183!5.96e-09!59;CL:0000359!6.78e-09!32;CL:0002551!4.73e-08!6;CL:0000393!9.64e-08!60;CL:0000211!9.64e-08!60;CL:0000003!2.19e-07!722;CL:0000569!2.19e-07!4;CL:0000011!2.19e-07!4;CL:0000192!4.85e-07!42;CL:0000514!4.85e-07!42;CL:0002621!4.98e-07!3;CL:0002368!6.29e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000515;1.87e-28;3!CL:0000056;1.64e-21;4!CL:0000317;5.42e-19;2!CL:1000448;5.42e-19;2!CL:0002308;5.42e-19;2!CL:0002140;5.42e-19;2!CL:0002328;5.46e-13;3!CL:0000680;1.51e-12;7!CL:0002368;1.78e-11;13!CL:0002202;1.37e-09;9!CL:0002632;1.37e-09;9!CL:0000622;3.78e-08;5!CL:0000154;6.28e-07;6!CL:0002551;6.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.79e-22,4;CL:0000317,5.44e-19,2;CL:1000448,5.44e-19,2;CL:0002308,5.44e-19,2;CL:0002140,5.44e-19,2;CL:0002328,3.36e-13,3;CL:0002368,1.69e-11,13;CL:0002202,1.29e-09,9;CL:0002632,1.29e-09,9;CL:0000622,3.78e-08,5;CL:0000154,6.29e-07,6;CL:0002551,7.75e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000515;1.64e-21;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.49e-18!82;UBERON:0000914!1.43e-16!83;UBERON:0002329!1.43e-16!83;UBERON:0003077!1.43e-16!83;UBERON:0003059!1.43e-16!83;UBERON:0007282!1.43e-16!83;UBERON:0009618!1.43e-16!83;UBERON:0007285!1.43e-16!83;UBERON:0001637!3.00e-15!42;UBERON:0003509!3.00e-15!42;UBERON:0004572!3.00e-15!42;UBERON:0004290!2.21e-14!70;UBERON:0004573!9.63e-12!33;UBERON:0004571!9.63e-12!33;UBERON:0001134!5.18e-11!61;UBERON:0002036!5.18e-11!61;UBERON:0003082!5.18e-11!61;UBERON:0001981!6.84e-11!60;UBERON:0007500!6.84e-11!60;UBERON:0004537!6.84e-11!60;UBERON:0006965!6.84e-11!60;UBERON:0000055!9.42e-11!69;UBERON:0002385!1.83e-10!63;UBERON:0001015!1.83e-10!63;UBERON:0000383!1.83e-10!63;UBERON:0004872!4.65e-10!84;UBERON:0002049!2.26e-09!79;UBERON:0007798!2.26e-09!79;UBERON:0000490!5.94e-09!138;UBERON:0000119!1.60e-08!312;UBERON:0005256!2.16e-08!143;UBERON:0000483!2.74e-08!309;UBERON:0004535!4.48e-08!110;UBERON:0001009!1.16e-07!113;UBERON:0001949!4.98e-07!3;UBERON:0003914!5.36e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.42e-19;2!UBERON:0007771;5.42e-19;2!UBERON:0003297;5.42e-19;2!UBERON:0001821;5.42e-19;2!UBERON:0003487;5.42e-19;2!UBERON:0001820;5.42e-19;2!UBERON:0004815;5.46e-13;3!UBERON:0002031;5.46e-13;3!UBERON:0001134;1.92e-09;16!UBERON:0002036;1.92e-09;16!UBERON:0002185;3.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.44e-19,2;UBERON:0007771,5.44e-19,2;UBERON:0003297,5.44e-19,2;UBERON:0001821,5.44e-19,2;UBERON:0003487,5.44e-19,2;UBERON:0001820,5.44e-19,2;UBERON:0005089,5.44e-19,2;UBERON:0005088,5.44e-19,2;UBERON:0004815,3.36e-13,3;UBERON:0002031,3.36e-13,3;UBERON:0002185,2.83e-08,5;UBERON:0000486,1.21e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0,0,0.188242339542605,0,0,0.612167784741805,0.641858054152187,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0.694281003215189,0,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,2.1185468930115,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,1.1409436430889,0.149448680551801,0.117434498643765,1.13311061057692,0.842704840213491,0.204154171254893,0.245668634623536,0,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0.831192346452549,0,0,0,0.226864366320042,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.301586917234893,0.277765335475589,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0,0.567100388969546,0,0.581267877027924,1.15014803749563,0,0,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0.771622122786426,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,3.04040744001916,1.84928690295345,2.86497541183833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0.308097234229289,0.307007349452259,1.10269257987624,0.107420244868274,0,0.170453254832202,0,0,0.192190067365106,5.10450849978336,0,0,0,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0,0,0.767693373934002,0,0.95460974377781,0.78494864019923,0,0,0,0.808729926293264,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,1.32687795048244,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,1.05844323998063,0.670302275535787,0,0,0.86101074534246,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.612691153526923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.73927574994817,0.318593534327405,0,0.310525913752519,0.414706207840855,0.265841714557995,0,0,0,0,0.181848659202559,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr12:66043314..66043321,+ | |||
}} |
Revision as of 14:26, 11 January 2014
Short description: | p@chr12:66043314..66043321, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:66043314..66043321, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.79e-22 | 4 |
sebum secreting cell | 5.44e-19 | 2 |
epithelial cell of sweat gland | 5.44e-19 | 2 |
epithelial cell of skin gland | 5.44e-19 | 2 |
acinar cell of sebaceous gland | 5.44e-19 | 2 |
bronchial epithelial cell | 3.36e-13 | 3 |
respiratory epithelial cell | 1.69e-11 | 13 |
epithelial cell of tracheobronchial tree | 1.29e-09 | 9 |
epithelial cell of lower respiratory tract | 1.29e-09 | 9 |
acinar cell | 3.78e-08 | 5 |
protein secreting cell | 6.29e-07 | 6 |
fibroblast of dermis | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.44e-19 | 2 |
epidermis gland | 5.44e-19 | 2 |
gland of integumental system | 5.44e-19 | 2 |
sebaceous gland | 5.44e-19 | 2 |
skin sebaceous gland | 5.44e-19 | 2 |
sweat gland | 5.44e-19 | 2 |
sweat gland placode | 5.44e-19 | 2 |
sebaceous gland placode | 5.44e-19 | 2 |
lower respiratory tract epithelium | 3.36e-13 | 3 |
epithelium of bronchus | 3.36e-13 | 3 |
bronchus | 2.83e-08 | 5 |
multilaminar epithelium | 1.21e-07 | 83 |