FFCP PHASE1:Hg19::chr12:104323463..104323474,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3220 | |||
|description=CAGE_peak_at_chr12:104323463..104323474,- | |||
|id=chr12:104323463..104323474,- | |||
|ontology_enrichment_celltype=CL:0000542!1.59e-23!53;CL:0000051!1.59e-23!53;CL:0000838!6.23e-23!52;CL:0000738!1.39e-19!140;CL:0000037!1.91e-18!172;CL:0000566!1.91e-18!172;CL:0000988!2.45e-18!182;CL:0002087!1.24e-16!119;CL:0002031!3.03e-15!124;CL:0002032!7.09e-15!165;CL:0000837!7.09e-15!165;CL:0000945!7.26e-12!24;CL:0000826!7.26e-12!24;CL:0000791!1.66e-10!18;CL:0000789!1.66e-10!18;CL:0002420!1.66e-10!18;CL:0002419!1.66e-10!18;CL:0000790!1.66e-10!18;CL:0000084!6.59e-10!25;CL:0000827!6.59e-10!25;CL:0000624!4.63e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.33e-23;18!CL:0000789;6.33e-23;18!CL:0002419;6.33e-23;18!CL:0000624;1.03e-22;6!CL:0000784;7.44e-18;3!CL:0000623;1.33e-16;3!CL:0000084;4.52e-16;25!CL:0000542;1.09e-15;53!CL:0000625;5.18e-08;11!CL:0000898;5.63e-08;3!CL:0000767;9.18e-08;3!CL:0000081;1.28e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.62e-23,18;CL:0000789,3.62e-23,18;CL:0002420,3.62e-23,18;CL:0002419,3.62e-23,18;CL:0000790,3.62e-23,18;CL:0000838,6.53e-23,52;CL:0000624,7.88e-23,6;CL:0000542,2.06e-22,53;CL:0000051,2.06e-22,53;CL:0000784,7.67e-18,3;CL:0000738,2.69e-17,136;CL:0000623,1.99e-16,3;CL:0000825,1.99e-16,3;CL:0000084,3.05e-16,25;CL:0000827,3.05e-16,25;CL:0000988,1.05e-14,177;CL:0000037,2.27e-14,168;CL:0002087,1.81e-12,115;CL:0002031,2.00e-10,120;CL:0002032,6.51e-10,161;CL:0000837,6.51e-10,161;CL:0000625,3.89e-08,11;CL:0000898,4.72e-08,3;CL:0000767,7.46e-08,3;CL:0000081,1.13e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.33e-23;18!CL:0000051;1.09e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0.382067028739756,0.738905305049512,0.550975469195755,0.393364276848904,1.91914699048606,1.23852898652861,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,1.46800219667424,0.553995408531877,2.00544447470142,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.75374599577023,0,0.434377689410233,0,0.736555271975129,0.316462387440884,0.633765858935825,0,0.628975936525128,0,0.150176892841506,0,0,0,0.547992461293902,0,0.546138611262131,0.889509253863555,0.426730222566507,1.60158394814405,2.29900975981793,0,0,1.1384259382189,2.34894875748376,0.764546456250458,0,1.12101712596307,0.263384084775077,3.540775862049,3.93010762749165,4.72883447698871,0,2.60737813306872,7.57516489175573,3.89653456815823,0.445641827540694,0.589211814949674,2.21533894583621,0.541607727530031,0.384273959177026,0.390178042679635,0.328875809207352,0.276350017785848,0,1.03800594213442,3.21048993707656,1.04535523804977,0.113309342697566,1.53288197440768,2.40539211837841,1.77113784413652,0.95569624297229,0.651083453856419,1.90090408889675,0.451725357233318,0.127986611154418,0,0,0,2.82249440514625,2.67440195783507,3.62061009706997,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,6.43924685624423,7.43593384014166,11.5151825412165,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0,0.121973706129595,0,0,0.310983165046111,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0.190493682876507,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,2.36436912242313,2.58753089831421,1.02674429023799,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,1.24060815673732,0.647142602455851,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.1605880751037,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.557216921387392,0,0,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0,0.211125408127993,0,0,0,0,0.492339221844278,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0,0.435753854075961,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.123563938946503,0,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0,0.450970258243478,0.207376382794494,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0.0633107959558787,0,0,0,0.19980960958213,0,0.343609788497747,0.171594997861965,0.14405479798815,0,0,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0,0.196854963029498,0.592713324460491,0,0.272406812223151,0,0.137539436597234,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.18628920882415,0,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10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| |||
|short_description=p@chr12:104323463..104323474,- | |||
}} |
Revision as of 15:34, 11 January 2014
Short description: | p@chr12:104323463..104323474, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:104323463..104323474, - |
Coexpression cluster: | C3220_Dendritic_Burkitt_thymus_CD4_CD34_lymphoma_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.62e-23 | 18 |
alpha-beta T cell | 3.62e-23 | 18 |
immature T cell | 3.62e-23 | 18 |
mature T cell | 3.62e-23 | 18 |
immature alpha-beta T cell | 3.62e-23 | 18 |
lymphoid lineage restricted progenitor cell | 6.53e-23 | 52 |
CD4-positive, alpha-beta T cell | 7.88e-23 | 6 |
lymphocyte | 2.06e-22 | 53 |
common lymphoid progenitor | 2.06e-22 | 53 |
plasmacytoid dendritic cell | 7.67e-18 | 3 |
leukocyte | 2.69e-17 | 136 |
natural killer cell | 1.99e-16 | 3 |
pro-NK cell | 1.99e-16 | 3 |
T cell | 3.05e-16 | 25 |
pro-T cell | 3.05e-16 | 25 |
hematopoietic cell | 1.05e-14 | 177 |
hematopoietic stem cell | 2.27e-14 | 168 |
nongranular leukocyte | 1.81e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.00e-10 | 120 |
hematopoietic oligopotent progenitor cell | 6.51e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.51e-10 | 161 |
CD8-positive, alpha-beta T cell | 3.89e-08 | 11 |
naive T cell | 4.72e-08 | 3 |
basophil | 7.46e-08 | 3 |
blood cell | 1.13e-07 | 11 |