FFCP PHASE1:Hg19::chr13:50571160..50571229,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9976 | |||
|TSSclassifier=strong | |||
|UniProt=O60858 | |||
|association_with_transcript=0bp_to_ENST00000356017,ENST00000378182,ENST00000457662_5end | |||
|description=CAGE_peak_1_at_TRIM13_5end | |||
|id=chr13:50571160..50571229,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.33e-08!172;CL:0000566!1.33e-08!172;CL:0002032!4.25e-08!165;CL:0000837!4.25e-08!165;CL:0000763!1.38e-07!112;CL:0000049!1.38e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000236;9.21e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.73e-09,168;CL:0002032,5.74e-09,161;CL:0000837,5.74e-09,161;CL:0000763,1.26e-08,108;CL:0000049,1.26e-08,108;CL:0000988,4.50e-07,177;CL:0002031,8.62e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.82e-07,114 | |||
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| |||
|short_description=p1@TRIM13 | |||
}} |
Revision as of 17:48, 11 January 2014
Short description: | p1@TRIM13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356017, ENST00000378182, ENST00000457662_5end |
EntrezGene: | TRIM13 |
HGNC: | 9976 |
UniProt: | O60858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.73e-09 | 168 |
hematopoietic oligopotent progenitor cell | 5.74e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.74e-09 | 161 |
myeloid cell | 1.26e-08 | 108 |
common myeloid progenitor | 1.26e-08 | 108 |
hematopoietic cell | 4.50e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 8.62e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.82e-07 | 114 |