FFCP PHASE1:Hg19::chr14:24733447..24733461,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7051 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11777 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000560478_5end | |||
|description=CAGE_peak_6_at_TGM1_5end | |||
|id=chr14:24733447..24733461,- | |||
|ontology_enrichment_celltype=CL:0002076!3.27e-30!43;CL:0000223!3.38e-22!59;CL:0002251!2.10e-17!21;CL:0002368!5.86e-17!13;CL:0000066!4.90e-16!254;CL:0000076!1.56e-10!62;CL:0002159!2.56e-10!13;CL:0002623!4.43e-10!3;CL:0002328!1.47e-09!3;CL:0002621!7.56e-09!3;CL:0000240!3.46e-08!6;CL:0000311!3.46e-08!6;CL:0000079!3.46e-08!6;CL:0000237!3.46e-08!6;CL:0000036!3.46e-08!6;CL:0000357!3.46e-08!6;CL:0000114!3.46e-08!6;CL:0000150!3.54e-08!9;CL:0002202!4.72e-08!9;CL:0002632!4.72e-08!9;CL:0000220!9.83e-08!246;CL:0002321!1.34e-07!248;CL:0000575!1.76e-07!2;CL:0002077!8.21e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.36e-20;42!CL:0000575;1.13e-19;2!CL:0002623;1.55e-13;3!CL:0002328;6.55e-13;3!CL:0002251;1.46e-11;20!CL:0002368;2.99e-11;13!CL:0002252;6.73e-11;1!CL:0002336;2.62e-10;1!CL:0002261;2.62e-10;1!CL:0002170;2.62e-10;1!CL:0000150;7.75e-10;9!CL:0002202;1.56e-09;9!CL:0002632;1.56e-09;9!CL:0000622;1.79e-08;5!CL:0000154;3.38e-07;6!CL:0000240;6.88e-07;6!CL:0000311;6.88e-07;6!CL:0000079;6.88e-07;6!CL:0000237;6.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.52e-24,42;CL:0000575,1.03e-19,2;CL:0000223,2.61e-17,58;CL:0002623,1.51e-13,3;CL:0002328,6.97e-13,3;CL:0002251,1.26e-11,20;CL:0000066,2.40e-11,253;CL:0002368,2.99e-11,13;CL:0002252,6.73e-11,1;CL:0002336,1.43e-10,1;CL:0002261,1.43e-10,1;CL:0002170,1.43e-10,1;CL:0000150,7.31e-10,9;CL:0002202,1.73e-09,9;CL:0002632,1.73e-09,9;CL:0000622,1.76e-08,5;CL:0000076,2.49e-08,63;CL:0000154,3.34e-07,6;CL:0000240,6.68e-07,6;CL:0000311,6.68e-07,6;CL:0000079,6.68e-07,6;CL:0000237,6.68e-07,6;CL:0000036,6.68e-07,6;CL:0000357,6.68e-07,6;CL:0000114,6.68e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.28e-09;58!CL:0000357;6.88e-07;6!CL:0000114;6.88e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!2.87e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.25e-16!72;UBERON:0000166!1.92e-14!21;UBERON:0004119!3.71e-14!169;UBERON:0000925!3.71e-14!169;UBERON:0006595!3.71e-14!169;UBERON:0000161!1.10e-12!35;UBERON:0000165!2.26e-12!28;UBERON:0000930!2.26e-12!28;UBERON:0001444!4.74e-10!48;UBERON:0000065!8.04e-10!53;UBERON:0003729!1.14e-09!5;UBERON:0004815!1.47e-09!3;UBERON:0002031!1.47e-09!3;UBERON:0000974!2.63e-09!10;UBERON:0007196!2.87e-09!14;UBERON:0001558!2.87e-09!14;UBERON:0001949!7.56e-09!3;UBERON:0001007!1.86e-08!155;UBERON:0001555!1.86e-08!155;UBERON:0007026!1.86e-08!155;UBERON:0006562!3.24e-08!11;UBERON:0002185!2.98e-07!4;UBERON:0000077!3.71e-07!130;UBERON:0003102!3.80e-07!95;UBERON:0003408!4.77e-07!10;UBERON:0003343!5.03e-07!4;UBERON:0004785!5.03e-07!4;UBERON:0001987!5.47e-07!4;UBERON:0004340!5.47e-07!4;UBERON:0003126!9.61e-07!7;UBERON:0001005!9.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;6.55e-13;3!UBERON:0002031;6.55e-13;3!UBERON:0002372;2.62e-10;1!UBERON:0001961;2.62e-10;1!UBERON:0001744;2.62e-10;1!UBERON:0001042;2.62e-10;1!UBERON:0001735;2.62e-10;1!UBERON:0000964;2.62e-10;4!UBERON:0010409;2.62e-10;4!UBERON:0000165;4.11e-08;28!UBERON:0002185;4.21e-08;5!UBERON:0000161;4.92e-08;19!UBERON:0000166;4.92e-08;19!UBERON:0000033;3.33e-07;50!UBERON:0001044;3.38e-07;6!UBERON:0003293;3.38e-07;6!UBERON:0003294;3.38e-07;6!UBERON:0010047;3.38e-07;6!UBERON:0003408;3.38e-07;6!UBERON:0000167;3.38e-07;6!UBERON:0007811;5.10e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,6.97e-13,3;UBERON:0002031,6.97e-13,3;UBERON:0000964,2.51e-10,4;UBERON:0010409,2.51e-10,4;UBERON:0004348,2.51e-10,4;UBERON:0005427,2.51e-10,4;UBERON:0002372,3.96e-10,1;UBERON:0001961,3.96e-10,1;UBERON:0001744,3.96e-10,1;UBERON:0001735,3.96e-10,1;UBERON:0001444,1.56e-08,49;UBERON:0002185,4.37e-08,5;UBERON:0000165,7.72e-08,29;UBERON:0000930,7.72e-08,29;UBERON:0000033,2.26e-07,56;UBERON:0001044,3.34e-07,6;UBERON:0003293,3.34e-07,6;UBERON:0003294,3.34e-07,6;UBERON:0010047,3.34e-07,6;UBERON:0000167,3.34e-07,6;UBERON:0000166,6.36e-07,22;UBERON:0001004,7.36e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,5.82872461268068,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.15797509499322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98775256867763,1.1240175325762,0.402115889646523,1.85176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0.283550194484773,0.268675568108545,1.45316969256981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,1.74953878978203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,1.78657797492418,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34710957815717,0.670302275535787,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0,0.873633341210151,0,0,0,0,0.290967049465258,0,0.90392296312213,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.71553273099941,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,5.13600075860701,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,6.2164849248911,3.92652497316085,0.691259661814092,0,0,0,0.423387050190929,1.3746412112643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21397089490184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0.31037357147929,0,0,0,0.435433495793923,0,1.21233695426258,0.430333232356058,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@TGM1 | |||
}} |
Revision as of 19:29, 11 January 2014
Short description: | p6@TGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TGM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000560478_5end |
EntrezGene: | TGM1 |
HGNC: | 11777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.52e-24 | 42 |
corneal epithelial cell | 1.03e-19 | 2 |
endodermal cell | 2.61e-17 | 58 |
acinar cell of salivary gland | 1.51e-13 | 3 |
bronchial epithelial cell | 6.97e-13 | 3 |
epithelial cell of alimentary canal | 1.26e-11 | 20 |
epithelial cell | 2.40e-11 | 253 |
respiratory epithelial cell | 2.99e-11 | 13 |
epithelial cell of esophagus | 6.73e-11 | 1 |
buccal mucosa cell | 1.43e-10 | 1 |
endothelial cell of viscerocranial mucosa | 1.43e-10 | 1 |
keratinized cell of the oral mucosa | 1.43e-10 | 1 |
glandular epithelial cell | 7.31e-10 | 9 |
epithelial cell of tracheobronchial tree | 1.73e-09 | 9 |
epithelial cell of lower respiratory tract | 1.73e-09 | 9 |
acinar cell | 1.76e-08 | 5 |
squamous epithelial cell | 2.49e-08 | 63 |
protein secreting cell | 3.34e-07 | 6 |
stratified squamous epithelial cell | 6.68e-07 | 6 |
keratin accumulating cell | 6.68e-07 | 6 |
stratified epithelial cell | 6.68e-07 | 6 |
keratinizing barrier epithelial cell | 6.68e-07 | 6 |
epithelial fate stem cell | 6.68e-07 | 6 |
stratified epithelial stem cell | 6.68e-07 | 6 |
surface ectodermal cell | 6.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 6.97e-13 | 3 |
epithelium of bronchus | 6.97e-13 | 3 |
cornea | 2.51e-10 | 4 |
eye surface | 2.51e-10 | 4 |
optic eminence | 2.51e-10 | 4 |
corneal primordium | 2.51e-10 | 4 |
tonsil | 3.96e-10 | 1 |
mucosa-associated lymphoid tissue | 3.96e-10 | 1 |
lymphoid tissue | 3.96e-10 | 1 |
tonsillar ring | 3.96e-10 | 1 |
subdivision of head | 1.56e-08 | 49 |
bronchus | 4.37e-08 | 5 |
mouth | 7.72e-08 | 29 |
stomodeum | 7.72e-08 | 29 |
head | 2.26e-07 | 56 |
saliva-secreting gland | 3.34e-07 | 6 |
gland of oral region | 3.34e-07 | 6 |
gland of foregut | 3.34e-07 | 6 |
oral gland | 3.34e-07 | 6 |
oral cavity | 3.34e-07 | 6 |
oral opening | 6.36e-07 | 22 |
respiratory system | 7.36e-07 | 74 |