FFCP PHASE1:Hg19::chr14:95236440..95236465,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4612 | |||
|TSSclassifier=strong | |||
|UniProt=P56915 | |||
|association_with_transcript=33bp_to_NM_173849,uc001ydu.2_5end | |||
|description=CAGE_peak_1_at_GSC_5end | |||
|id=chr14:95236440..95236465,- | |||
|ontology_enrichment_celltype=CL:0000136!3.27e-11!15;CL:0002334!3.24e-09!12;CL:0000055!3.97e-08!180;CL:0002570!5.76e-08!8;CL:0000057!2.67e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.23e-18;12!CL:0000136;6.07e-14;13!CL:0002570;1.02e-11;8!CL:0000153;3.03e-07;9!CL:0000447;3.03e-07;9!CL:0002580;3.07e-07;3!CL:0002615;3.33e-07;3!CL:0002579;5.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.70e-18,12;CL:0000136,4.07e-17,15;CL:0002570,8.20e-12,8;CL:0000153,2.60e-07,9;CL:0000447,2.60e-07,9;CL:0002580,2.94e-07,3;CL:0002615,3.25e-07,3;CL:0002579,5.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!2.73e-10!14;UBERON:0000310!1.98e-08!10;UBERON:0001443!2.41e-07!11;UBERON:0003688!6.71e-07!6;UBERON:0002358!6.71e-07!6;UBERON:0003684!6.71e-07!6;UBERON:0001178!6.71e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.58e-16;10!UBERON:0001013;6.34e-15;14!UBERON:0001443;1.28e-14;11!UBERON:0004457;8.06e-14;9!UBERON:0000042;8.06e-14;9!UBERON:0003688;1.49e-12;6!UBERON:0002358;1.49e-12;6!UBERON:0003684;1.49e-12;6!UBERON:0001178;1.49e-12;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.22e-16,10;UBERON:0001013,4.60e-15,14;UBERON:0001443,1.11e-14,11;UBERON:0003688,1.46e-12,6;UBERON:0002358,1.46e-12,6;UBERON:0003684,1.46e-12,6;UBERON:0001178,1.46e-12,6;UBERON:0004457,5.73e-10,12;UBERON:0000042,5.73e-10,12 | |||
|phase1_expression=3.81524596468169,4.49611100171065,3.66481450649525,6.00439790118782,5.81049422755474,0.872338524100369,0,5.05375898741465,1.30592814099919,0,0,0.436882744260345,0,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0,0,0,0.125542639594803,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.383959833463255,0,0,0,0.403213486449465,0.802320587350522,1.59306844271079,0,0,0.12786256184353,2.53007406669196,4.01070328508712,1.73815822752988,0,0.486634870302636,0.0945348171640679,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.759783069987479,0,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0.570471821544449,0.448346041655403,0,0.161872944368132,0,0,0,0.103325781175765,0,4.20353779773547,0,0.718618141816238,0.336672227908132,0.250237039743928,0,1.75591048352335,1.5324389789951,4.35690370829131,0,0,0.213557388818567,0.635795703478686,0,0,0.772921620136887,1.11670113798954,0.843881661206331,0.974370051611986,0.252433774244115,0.552299391853796,0.161646056818812,0,0.201504196455281,0,0,0,0,0.243947412259191,0,0.348581828608555,0,0.252320850875628,0.36497735907583,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,8.69224837755203,6.86788929675898,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,1.00917975910825,0.43596006883328,0,0,17.8828222925941,3.381211010224,0,0,0.514414748524284,0,0,0,0,0.823240336780769,0.977208552881205,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0,1.57624608161542,2.37190332345469,3.33691894327346,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,7.48695101510906,3.21172179834891,6.78120384645919,6.55991923959194,1.80567659836631,2.27407504055985,2.0694614258501,0,0.737476674166813,0,0.195801157462741,0,0,0,0.106727557803444,0.303127571446259,0,1.81434175997808,5.45837177201309,3.6830873589135,8.98112302185835,3.45975702990393,4.60536524160033,4.3430558708774,2.96836132889982,1.85051632563187,4.6166048581413,1.39616165223476,0,1.62694529843943,0.120859449591622,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366277859273374,0.165018999841176,0,0,0,1.7400729292582,0.770243085573222,1.99554777143968,0.413509717453592,0.751941714077915,1.30515024522806,0.852266274161009,3.20515328328254,0,0,0,0,0,0,1.3940745403212,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0,0.141405431953713,2.26016233240486,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,2.9555068941673,3.29294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,1.91311527274587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,2.78365540616599,0,0,2.27308917445131,0,1.78178808499583,0.921482106297696,0,0,0,2.47205811340139,0,0.996239941255349,0,0,0.409074730008619,0,1.24415835064723,0,0.716084698702437,0,0.690503839458535,0,0,0,0,0,5.72941074387513,0,4.34999745260876,0,0,0.472775363535873,0,0,0.694499979733169,0,0,0,0,0,0,0,0.139423744278603,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0.391329237864179,0.971121518136371,0.789168805698781,0,0,1.13735843331278,0.751617097072463,0.829505531177977,0,0.330991955875499,0.313932918407225,2.38944859545918,0,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,0.387956065953678,4.50106246126651,0.90392296312213,0,0,0,1.95551382734803,0,0.426905989478705,2.99714414373195,2.16135625731159,0.80175617316141,0,0,0.99402028452346,0,0,0,0.407992870545287,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,1.44677833618517,0,0.415440338029185,0,0,0,0,0.157611414598396,0.0524545881349981,0,5.37862017998534,0,1.42939065274673,0,0.25426853765475,0,0,0,0,0,0,0.453248366080503,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,4.89616023032527,3.7603484103405,2.45076461410769,0.655745261419609,0,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,1.6468607378872,0,0,2.83584125485061,4.67426619694449,2.77402930751307,2.08343305802598,3.77351852628863,1.77962244319307,0.686520205190771,0.302461847526478,0.777186002913902,0,0,0.449803112163605,0,0,1.32920857278997,0,0,0,0.406870733204662,0,0,0,0,0,2.40376993627955,4.04099386519103,0,0,0,0.782982875895635,0,0.231522474323834,0,0.358177682162975,3.08801447160972,1.31570429747224,1.94358060540469,0,0.168942440653073,0,2.41801239211839,0.911579868532147,0,0,0,0,2.6208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| |||
|short_description=p1@GSC | |||
}} |
Revision as of 21:45, 11 January 2014
Short description: | p1@GSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GSC_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_NM_173849, uc001ydu.2_5end |
EntrezGene: | GSC |
HGNC: | 4612 |
UniProt: | P56915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.70e-18 | 12 |
fat cell | 4.07e-17 | 15 |
mesenchymal stem cell of adipose | 8.20e-12 | 8 |
GAG secreting cell | 2.60e-07 | 9 |
carbohydrate secreting cell | 2.60e-07 | 9 |
preadipocyte of the breast | 2.94e-07 | 3 |
adipocyte of omentum tissue | 3.25e-07 | 3 |
omentum preadipocyte | 5.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
breast | 2.22e-16 | 10 |
adipose tissue | 4.60e-15 | 14 |
chest | 1.11e-14 | 11 |
omentum | 1.46e-12 | 6 |
peritoneum | 1.46e-12 | 6 |
abdominal cavity | 1.46e-12 | 6 |
visceral peritoneum | 1.46e-12 | 6 |
cavity lining | 5.73e-10 | 12 |
serous membrane | 5.73e-10 | 12 |