FFCP PHASE1:Hg19::chr15:81474771..81474784,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3603 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5980 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-156bp_to_ENST00000560241_5end | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_13_at_IL16_5end | |||
|id=chr15:81474771..81474784,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.09e-13!10;CL:0000541!2.09e-13!10;CL:0002567!1.31e-09!3;CL:0000147!3.30e-09!14;CL:0002582!9.27e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.55e-59;10!CL:0002567;6.64e-50;3!CL:0000147;2.67e-42;14!CL:0000710;1.28e-29;20!CL:0000075;6.22e-22;27!CL:0002566;9.48e-18;1!CL:0002581;9.48e-18;1!CL:0002077;2.36e-16;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.05e-59,10;CL:0000541,2.05e-59,10;CL:0002567,2.64e-50,3;CL:0000147,1.80e-42,14;CL:0000710,9.70e-30,20;CL:0000075,5.08e-22,27;CL:0002581,8.72e-18,1;CL:0002566,1.03e-17,1;CL:0002077,1.81e-17,34;CL:0000333,8.76e-14,41;CL:0000133,1.17e-09,59;CL:0000221,6.42e-08,72 | |||
|ontology_enrichment_development_v019=UBERON:0004874;9.48e-18;1!UBERON:0008814;1.51e-09;2!UBERON:0010056;1.51e-09;2!UBERON:0003056;8.86e-07;3 | |||
|ontology_enrichment_disease=DOID:1909!6.47e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.33e-34;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.00e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.62e-13!115;UBERON:0003101!9.46e-10!22;UBERON:0000079!9.46e-10!22;UBERON:0005156!3.31e-08!59;UBERON:0000990!3.31e-08!59;UBERON:0000162!4.75e-08!14;UBERON:0001353!4.75e-08!14;UBERON:0000163!4.75e-08!14;UBERON:0006866!4.75e-08!14;UBERON:0000164!4.75e-08!14;UBERON:0000931!4.75e-08!14;UBERON:0000161!7.07e-08!35;UBERON:0004122!1.93e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;9.48e-18;1!UBERON:0008811;9.48e-18;1!UBERON:0005406;1.51e-09;2!UBERON:0001723;8.86e-07;3!UBERON:0001033;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,7.37e-18,1;UBERON:0008811,7.37e-18,1;UBERON:0006258,7.37e-18,1;UBERON:0005876,7.37e-18,1;UBERON:0004874,7.37e-18,1;UBERON:0005406,1.44e-09,2;UBERON:0001723,9.64e-07,3;UBERON:0001033,9.64e-07,3;UBERON:0010056,9.64e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46045156871989,1.90994212779139,2.34434894420094,1.71072446022705,0.308482478109971,2.40274446275134,4.85904935471983,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0.154209693802656,0,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.18628920882415,0,0,1.06154382279153,9.42035600698392,0,0,0,0.149254802886874,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,1.48863353516788,0,0,0.535701835878287,0,0,0,0.177404740325278,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,1.07214816264985,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.245148321753905,0,0,0.297046400327086,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,1.30630048738177,0,0.134704106029175,0.358611026963382,0.332660356546013,0,0,0,0,0,0.611207220914332,0.813792356631477,0.665756774185513,0.201273793591026,0 | |||
|short_description=p13@IL16 | |||
}} |
Revision as of 00:53, 12 January 2014
Short description: | p13@IL16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_IL16_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -156bp_to_ENST00000560241_5end |
EntrezGene: | IL16 |
HGNC: | 5980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.05e-59 | 10 |
melanoblast | 2.05e-59 | 10 |
light melanocyte | 2.64e-50 | 3 |
pigment cell | 1.80e-42 | 14 |
neurecto-epithelial cell | 9.70e-30 | 20 |
columnar/cuboidal epithelial cell | 5.08e-22 | 27 |
perirenal preadipocyte | 8.72e-18 | 1 |
dark melanocyte | 1.03e-17 | 1 |
ecto-epithelial cell | 1.81e-17 | 34 |
migratory neural crest cell | 8.76e-14 | 41 |
neurectodermal cell | 1.17e-09 | 59 |
ectodermal cell | 6.42e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
penis | 7.37e-18 | 1 |
intromittent organ | 7.37e-18 | 1 |
lateral plate mesenchyme | 7.37e-18 | 1 |
undifferentiated genital tubercle | 7.37e-18 | 1 |
somatopleure | 7.37e-18 | 1 |
perirenal fat | 1.44e-09 | 2 |
tongue | 9.64e-07 | 3 |
gustatory system | 9.64e-07 | 3 |
future tongue | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.00e-34 | 2 |