FFCP PHASE1:Hg19::chr17:40719102..40719141,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6945 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11645 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UH92 | |||
|association_with_transcript=24bp_to_ENST00000246912,ENST00000346833,ENST00000435881,NM_170607,NM_198204,NM_198205,uc002iaf.2,uc002iag.2,uc002iah.2_5end | |||
|description=CAGE_peak_1_at_MLX_5end | |||
|id=chr17:40719102..40719141,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.39e-09!591;CL:0000548!1.74e-09!679;CL:0000004!1.74e-09!679;CL:0000255!1.74e-09!679;CL:0000012!8.93e-09!682;CL:0000055!1.17e-07!180;CL:0000192!2.17e-07!42;CL:0000514!2.17e-07!42;CL:0000183!3.88e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.08e-07,43;CL:0000514,6.08e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!7.59e-11!238;UBERON:0009142!7.59e-11!238;UBERON:0000486!2.54e-10!82;UBERON:0000926!6.67e-10!448;UBERON:0004120!6.67e-10!448;UBERON:0006603!6.67e-10!448;UBERON:0005256!1.74e-08!143;UBERON:0004290!2.61e-08!70;UBERON:0000914!1.32e-07!83;UBERON:0002329!1.32e-07!83;UBERON:0003077!1.32e-07!83;UBERON:0003059!1.32e-07!83;UBERON:0007282!1.32e-07!83;UBERON:0009618!1.32e-07!83;UBERON:0007285!1.32e-07!83;UBERON:0002385!3.57e-07!63;UBERON:0001015!3.57e-07!63;UBERON:0000383!3.57e-07!63;UBERON:0001134!3.90e-07!61;UBERON:0002036!3.90e-07!61;UBERON:0003082!3.90e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,6.15e-10,83;UBERON:0007503,8.34e-09,78;UBERON:0002329,5.98e-08,71;UBERON:0003059,5.98e-08,71;UBERON:0007282,5.98e-08,71;UBERON:0004290,5.98e-08,71;UBERON:0009618,5.98e-08,71;UBERON:0005256,9.44e-08,122;UBERON:0003077,2.18e-07,72;UBERON:0007285,2.18e-07,72;UBERON:0003104,2.28e-07,160;UBERON:0009142,2.28e-07,160;UBERON:0002100,2.75e-07,199;UBERON:0007524,3.87e-07,73;UBERON:0001041,5.68e-07,87;UBERON:0002385,7.86e-07,64;UBERON:0001015,7.86e-07,64;UBERON:0000383,7.86e-07,64;UBERON:0001134,8.70e-07,62;UBERON:0002036,8.70e-07,62;UBERON:0003082,8.70e-07,62 | |||
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| |||
|short_description=p1@MLX | |||
}} |
Revision as of 15:28, 20 January 2014
Short description: | p1@MLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MLX_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000246912, ENST00000346833, ENST00000435881, NM_170607, NM_198204, NM_198205, uc002iaf.2, uc002iag.2, uc002iah.2_5end |
EntrezGene: | MLX |
HGNC: | 11645 |
UniProt: | Q9UH92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.08e-07 | 43 |
smooth muscle myoblast | 6.08e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 6.15e-10 | 83 |
epithelial vesicle | 8.34e-09 | 78 |
somite | 5.98e-08 | 71 |
presomitic mesoderm | 5.98e-08 | 71 |
presumptive segmental plate | 5.98e-08 | 71 |
dermomyotome | 5.98e-08 | 71 |
trunk paraxial mesoderm | 5.98e-08 | 71 |
trunk mesenchyme | 9.44e-08 | 122 |
paraxial mesoderm | 2.18e-07 | 72 |
presumptive paraxial mesoderm | 2.18e-07 | 72 |
mesenchyme | 2.28e-07 | 160 |
entire embryonic mesenchyme | 2.28e-07 | 160 |
trunk | 2.75e-07 | 199 |
dense mesenchyme tissue | 3.87e-07 | 73 |
foregut | 5.68e-07 | 87 |
muscle tissue | 7.86e-07 | 64 |
musculature | 7.86e-07 | 64 |
musculature of body | 7.86e-07 | 64 |
skeletal muscle tissue | 8.70e-07 | 62 |
striated muscle tissue | 8.70e-07 | 62 |
myotome | 8.70e-07 | 62 |