FFCP PHASE1:Hg19::chr19:40502828..40502848,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C554 | |||
|description=CAGE_peak_at_chr19:40502828..40502848,- | |||
|id=chr19:40502828..40502848,- | |||
|ontology_enrichment_celltype=CL:0000738!2.59e-29!140;CL:0000037!2.48e-28!172;CL:0000566!2.48e-28!172;CL:0000988!3.71e-27!182;CL:0002032!1.13e-26!165;CL:0000837!1.13e-26!165;CL:0002031!3.82e-26!124;CL:0002087!3.94e-24!119;CL:0000542!3.46e-17!53;CL:0000051!3.46e-17!53;CL:0000838!4.88e-17!52;CL:0000860!1.61e-13!45;CL:0002057!3.44e-12!42;CL:0000134!4.63e-12!358;CL:0000763!4.11e-11!112;CL:0000049!4.11e-11!112;CL:0002320!5.94e-11!365;CL:0000557!9.74e-11!71;CL:0000766!5.01e-10!76;CL:0000839!2.64e-09!70;CL:0002009!4.64e-09!65;CL:0000219!7.49e-09!390;CL:0000945!1.42e-08!24;CL:0000826!1.42e-08!24;CL:0002194!4.29e-08!63;CL:0000576!4.29e-08!63;CL:0000040!4.29e-08!63;CL:0000559!4.29e-08!63;CL:0000084!6.82e-08!25;CL:0000827!6.82e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.69e-16;53!CL:0000084;6.74e-15;25!CL:0000791;2.69e-11;18!CL:0000789;2.69e-11;18!CL:0002419;2.69e-11;18!CL:0000623;1.28e-08;3!CL:0000860;4.46e-08;33!CL:0002057;4.46e-08;33!CL:0002087;1.04e-07;104!CL:0000738;1.82e-07;136!CL:0000625;3.08e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.86e-30,136;CL:0002031,7.98e-25,120;CL:0000037,4.28e-24,168;CL:0000988,2.66e-23,177;CL:0000838,9.95e-22,52;CL:0002087,1.97e-21,115;CL:0000542,3.51e-21,53;CL:0000051,3.51e-21,53;CL:0002032,9.24e-21,161;CL:0000837,9.24e-21,161;CL:0000084,2.86e-15,25;CL:0000827,2.86e-15,25;CL:0000791,1.43e-11,18;CL:0000789,1.43e-11,18;CL:0002420,1.43e-11,18;CL:0002419,1.43e-11,18;CL:0000790,1.43e-11,18;CL:0000134,1.75e-09,354;CL:0002320,5.12e-09,361;CL:0000623,1.57e-08,3;CL:0000825,1.57e-08,3;CL:0000219,2.13e-07,386;CL:0000625,2.68e-07,11;CL:0000557,6.63e-07,67;CL:0000766,7.21e-07,72;CL:0000624,7.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;5.69e-16;53!CL:0000790;2.69e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-13!102;UBERON:0003061!1.12e-13!102;UBERON:0002371!2.24e-12!80;UBERON:0002193!6.52e-12!112;UBERON:0001474!2.18e-11!86;UBERON:0002405!9.28e-11!115;UBERON:0002384!1.14e-10!375;UBERON:0004765!1.13e-07!101;UBERON:0001434!1.13e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.19e-08,371;UBERON:0002390,3.08e-08,98;UBERON:0003061,3.08e-08,98;UBERON:0002371,2.89e-07,76;UBERON:0002193,6.22e-07,108 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0.687720651731561,0.656804715599566,0.708397031823113,1.57345710739562,1.53531759238885,0.464448369948228,1.83884244895785,0.6024118375565,0,1.00707360754392,0.568676929949686,0.880801318004542,0.553995408531877,0.401088894940283,0.868043482863407,0.223915474239924,0.971680998056939,0,0.726991193897824,0.377875943688809,0.485168122375632,0.929716147622738,1.6446715520873,0.309706370895104,0,1.5369642391746,2.60130452877444,0.344745680736619,2.5819387343353,0,0.564727018627814,0.272906150057846,1.79778787556068,0.306083892370903,1.28371610830437,1.91801137739712,0.659702600373432,0.997318288108159,0.852449501065388,1.16083695451434,2.26954089876456,0.622822248995575,0.502497330513487,2.60741459210101,1.08594422352558,0.605399502633369,2.57794345191295,1.26584954976354,0.211255286311942,0,0.628975936525128,0.22465726229299,0.300353785683013,0.48217676009124,0.285012743741249,0.19891667719909,0.91332076882317,0,1.09227722252426,2.66852776159066,0,1.60158394814405,1.72425731986345,0.661044872784862,1.90810750907073,2.84606484554724,0.587237189370939,0.764546456250458,0,1.68152568894461,0.263384084775077,0.983548850569165,1.96505381374582,4.93443597598822,1.00311897234407,2.93330039970231,1.89379122293893,1.94826728407911,0.557052284425868,0.883817722424512,1.10766947291811,1.08321545506006,0.640456598628376,0.520237390239513,0.328875809207352,1.10540007114339,0.579606171470105,1.03800594213442,1.07016331235885,0,0.339928028092699,1.53288197440768,0.68725489096526,0.759059076058509,0,0,1.90090408889675,1.05402583354441,0.639933055772092,0,0,1.64225599384209,2.62088766192152,3.7441627409691,2.17236605824198,0,0,0,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0.953962497221368,0,1.85728750664782,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0.622422070799533,0.269421344139376,0.163461903113459,0.302714855289863,0,0.234321431833797,0,1.1409436430889,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0.408308342509787,0,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,0.900273288253207,0.206105058476878,1.03056216018252,0,0.337552664482532,0.0974370051611986,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0.286804595389004,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0.464367928031979,0,0.473227200159376,0.505754070234305,0.241011029883482,0.330881918197182,0.217879444092406,0,0.539325232640658,0,0,0,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,1.7658523976586,0.368965315629341,0.171567810298526,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0.288732895522148,0.462985512576611,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0.44024217006613,9.95174954595706,8.07071739134984,12.8767282094908,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0.87192013766656,0,0,0,0,0,0,0.514414748524284,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0.448340575974109,2.1673383622212,3.23441362289276,3.08023287071396,0,0,0,0.335032530668698,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,2.15714200818617,1.28073069364133,0,0,0.30239029332968,0,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.348631135379878,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0.54941678891006,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.429680979473094,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0.255897791311334,0,0,1.56989728039846,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0,0,0,0.79312517629427,0.106824071127473,0,0,0.371606350251437,0.28853842595289,0.142283686696828,0.159426272728822,0.997896857164083,0.383010740264733,0.846694330895531,0,0.280797178113459,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0.403599414382095,0,0,0,0.447352215784832,0,0.19538809540204,0.835218521685727,0,0.270455678475983,0.99921590399346,0,0.18714054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| |||
|short_description=p@chr19:40502828..40502848,- | |||
}} |
Revision as of 23:18, 20 January 2014
Short description: | p@chr19:40502828..40502848, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:40502828..40502848, - |
Coexpression cluster: | C554_Mast_Natural_CD8_CD14_CD4_Basophils_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.86e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 7.98e-25 | 120 |
hematopoietic stem cell | 4.28e-24 | 168 |
hematopoietic cell | 2.66e-23 | 177 |
lymphoid lineage restricted progenitor cell | 9.95e-22 | 52 |
nongranular leukocyte | 1.97e-21 | 115 |
lymphocyte | 3.51e-21 | 53 |
common lymphoid progenitor | 3.51e-21 | 53 |
hematopoietic oligopotent progenitor cell | 9.24e-21 | 161 |
hematopoietic multipotent progenitor cell | 9.24e-21 | 161 |
T cell | 2.86e-15 | 25 |
pro-T cell | 2.86e-15 | 25 |
mature alpha-beta T cell | 1.43e-11 | 18 |
alpha-beta T cell | 1.43e-11 | 18 |
immature T cell | 1.43e-11 | 18 |
mature T cell | 1.43e-11 | 18 |
immature alpha-beta T cell | 1.43e-11 | 18 |
mesenchymal cell | 1.75e-09 | 354 |
connective tissue cell | 5.12e-09 | 361 |
natural killer cell | 1.57e-08 | 3 |
pro-NK cell | 1.57e-08 | 3 |
motile cell | 2.13e-07 | 386 |
CD8-positive, alpha-beta T cell | 2.68e-07 | 11 |
granulocyte monocyte progenitor cell | 6.63e-07 | 67 |
myeloid leukocyte | 7.21e-07 | 72 |
CD4-positive, alpha-beta T cell | 7.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.19e-08 | 371 |
hematopoietic system | 3.08e-08 | 98 |
blood island | 3.08e-08 | 98 |
bone marrow | 2.89e-07 | 76 |
hemolymphoid system | 6.22e-07 | 108 |