FFCP PHASE1:Hg19::chr19:49994430..49994434,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=26816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=10162 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000363389,NR_000018,uc010enb.1_5end | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_1_at_SNORD35A_5end | |||
|id=chr19:49994430..49994434,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002202;9.47e-09;9!CL:0002632;9.47e-09;9!CL:0000307;1.49e-07;3!CL:0002328;3.32e-07;3!CL:0000346;5.93e-07;3!CL:1000428;5.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.00e-08,9;CL:0002632,1.00e-08,9;CL:0000068,1.38e-07,3;CL:0000069,1.38e-07,3;CL:0000307,1.38e-07,3;CL:0000377,1.38e-07,3;CL:0000346,3.77e-07,3;CL:1000428,3.77e-07,3;CL:0002328,3.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.49e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.32e-07;3!UBERON:0002031;3.32e-07;3!UBERON:0000412;5.93e-07;3!UBERON:0001992;5.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.77e-07,3;UBERON:0001992,3.77e-07,3;UBERON:0004815,3.89e-07,3;UBERON:0002031,3.89e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.612002073732759,0,0.286235987131057,0.273748850145768,0.251085279189606,0.229240217243854,0.410502947249729,0.157421562627358,0,0.383829398097213,0,0.919421224478927,1.204823675113,2.21852406100073,0.154934401160603,0.284338464974843,0.293600439334847,0,0,0.434021741431704,0,0.32389366601898,0,0,0.377875943688809,0,0.232429036905685,0.822335776043652,0,0,0.512321413058201,0.236482229888585,0,0,1.35426486594342,0.564727018627814,0,0.224723484445085,0,0.320929027076094,1.27867425159808,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,1.21079900526674,0.368277635987565,0.632924774881769,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,1.52909291250092,0,0,0,0.196709770113833,2.35806457649499,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0.444859689486181,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,1.60464117470104,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.327447688744282,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0.419499436209906,0,0,0,0,0,0.805658634218294,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0.949265659568129,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0.354668382198357,0,2.1349799145941,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0.704606991862589,0.323745888736263,0.280901613404497,0,0.491337269247072,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0.168776332241266,0,0.504867548488229,0,0.484938170456436,0,0.201504196455281,0,0,0,0,0.487894824518382,0.132529768321485,0.232387885739037,0.725627385107593,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.441463099414651,0.368965315629341,0.171567810298526,0.329250856225877,1.1240175325762,0.301586917234893,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,3.95102198979638,2.57545848628462,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0.528290604079356,0,0,0.25248486685276,0.063497894292169,0.381988425558278,0,3.4214489204541,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0,0,141.165559676852,0,1.04007436911366,0,0,0.266422179016099,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0.197030760201927,0.646882724578552,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0.24538298343828,0,0,0,0,0,0.117141414992713,0.601892199455438,0,0,0.664225598535437,0.921845842708516,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0.426910231213777,0,3.32870879020994,0.604780586659361,0,0,0,0.256278298511402,0,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0,0.464841513839837,0,0,0.460404944679482,0.114814448164607,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0.680374821106063,0.647747748306418,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.366277859273374,0,0,0,0,0.290012154876366,0.154048617114644,0,0.689182862422653,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0.384380134730212,0.382838137483752,0.10115778085555,0,0.94443704049192,1.3940745403212,0,0.532306030317022,0,0.55597265731176,0,0,0,0,0,0,0,1.56989728039846,0,0.274537029736055,0,0,1.58510321173008,0,0,0,1.05650146756755,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0.699869440489966,0.192444225451024,2.68120910214315,4.3556393944529,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0.371606350251437,0,0.284567373393656,0,0.199579371432817,0.191505370132367,0.635020748171649,0.649243880549111,0,0.456469358066384,0.47003968731907,0,0.338583555603207,0.642352300414798,0.403599414382095,0,0.343505344755765,0.307240764308458,0,0,0.19538809540204,1.11362469558097,0,0.270455678475983,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0,0,0,0.63337622438398,0,0.276283915531148,0.251932747854276,0.102268682502155,0.369254416383208,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.227586896570999,0.508507300585533,1.18193840883968,0.689486746482929,1.16641845353302,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0.139423744278603,0,0.113942055847001,0.23056390438806,0.359030577639089,0.325942115766024,0,0,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0.196062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| |||
|short_description=p1@SNORD35A | |||
}} |
Revision as of 00:30, 21 January 2014
Short description: | p1@SNORD35A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SNORD35A_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_ENST00000363389, NR_000018, uc010enb.1_5end |
EntrezGene: | SNORD35A |
HGNC: | 10162 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.00e-08 | 9 |
epithelial cell of lower respiratory tract | 1.00e-08 | 9 |
duct epithelial cell | 1.38e-07 | 3 |
branched duct epithelial cell | 1.38e-07 | 3 |
tracheal epithelial cell | 1.38e-07 | 3 |
tracheoblast | 1.38e-07 | 3 |
hair follicle dermal papilla cell | 3.77e-07 | 3 |
stem cell of epidermis | 3.77e-07 | 3 |
bronchial epithelial cell | 3.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.77e-07 | 3 |
papillary layer of dermis | 3.77e-07 | 3 |
lower respiratory tract epithelium | 3.89e-07 | 3 |
epithelium of bronchus | 3.89e-07 | 3 |