FFCP PHASE1:Hg19::chr2:158114334..158114345,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11227 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |||
|TSSclassifier=strong | |||
|UniProt=A5PKZ1,Q7Z7M9 | |||
|association_with_transcript=0bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | |||
|coexpression_cluster_id=C2663 | |||
|description=CAGE_peak_12_at_GALNT5_5end | |||
|id=chr2:158114334..158114345,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.10e-15!75;CL:0000055!8.22e-13!180;CL:0002620!1.02e-12!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.19e-17;23!CL:0000764;1.62e-14;2!CL:0000558;1.62e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.92e-18,23;CL:0000057,1.66e-14,76;CL:0000764,1.93e-14,2;CL:0000765,1.93e-14,2;CL:0000050,1.93e-14,2;CL:0000038,1.93e-14,2;CL:0000558,1.93e-14,2;CL:0000547,1.93e-14,2;CL:0000549,1.93e-14,2;CL:0000550,1.93e-14,2;CL:0000552,1.93e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.83e-08!5;DOID:450!2.83e-08!5;DOID:66!2.83e-08!5;DOID:423!2.83e-08!5;DOID:0080000!2.83e-08!5;DOID:11722!2.83e-08!5;DOID:1036!2.55e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.01e-14;8!DOID:2513;2.43e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.77e-14,8;DOID:2513,2.71e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.27e-08!95;UBERON:0001828!5.83e-08!8;UBERON:0002097!2.45e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.55e-09;41!UBERON:0002199;2.62e-07;46!UBERON:0002416;2.62e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.19e-12,41;UBERON:0002199,1.50e-10,46;UBERON:0002416,1.50e-10,46 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.37129905888014,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,4.76673050927588,0.286836620748814,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0,0,0,0.612975591598039,0.751190294532984,0.113432183160021,0.717558542755448,0.427114777637135,0.847727604638247,2.10063767259082,2.47326070172253,2.57640540045629,1.30281799432113,2.36286865137773,1.46155507741798,0.504867548488229,0.736399189138395,0.80823028409406,4.9701342952326,1.20902517873168,0,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0.839910640994298,0.141775097242386,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0.356857977594324,0.630809660135739,0,0.300946099727719,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,1.2276957863045,0.280660094433074,0.256278298511402,0,0,0,0,0,0.328508624055237,1.03850885836724,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,3.13722541229881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0.576570202095319,0.510450849978337,0.10115778085555,0.464845549297286,3.46293581513704,0,0.308033580176089,0,0,0.37064843820784,0.572499546967965,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,1.10273068709225,0,1.31535265576129,0.578775534266688,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0.633322905892992,0,0,0,0.48111056362756,0,0,0,0,0,0,0,1.01489521846434,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0.715880777515084,0.246169610922139,3.11039587661807,1.07842021376792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884634079449797,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0.166211681900156,4.06072189110925,5.09762589226123,3.85989650044438,2.65655225813859,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0.410462603746695,1.02232813071253,0,0,1.32506888912221,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0.181848659202559,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0.567515953566836,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.588901401691458,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41095188908457,0.245148321753905,0,0,0,0,0.509781344063451,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,1.11598505450025,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p12@GALNT5 | |||
}} |
Revision as of 06:08, 21 January 2014
Short description: | p12@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GALNT5_5end |
Coexpression cluster: | C2663_Fibroblast_Reticulocytes_Smooth_chronic_basal_cerebellum_liposarcoma |
Association with transcript: | 0bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.92e-18 | 23 |
fibroblast | 1.66e-14 | 76 |
erythroid lineage cell | 1.93e-14 | 2 |
erythroblast | 1.93e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 1.93e-14 | 2 |
erythroid progenitor cell | 1.93e-14 | 2 |
reticulocyte | 1.93e-14 | 2 |
proerythroblast | 1.93e-14 | 2 |
basophilic erythroblast | 1.93e-14 | 2 |
polychromatophilic erythroblast | 1.93e-14 | 2 |
orthochromatic erythroblast | 1.93e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 5.19e-12 | 41 |
integument | 1.50e-10 | 46 |
integumental system | 1.50e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.77e-14 | 8 |
basal cell carcinoma | 2.71e-08 | 1 |