FFCP PHASE1:Hg19::chr7:98870454..98870479,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31038 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-444bp_to_ENST00000330888,NR_002147,uc003upw.2_5end | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_1_at_MYH16_5end | |||
|id=chr7:98870454..98870479,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.86e-27!254;CL:0002076!3.53e-13!43;CL:0000223!7.56e-13!59;CL:0002621!4.90e-11!3;CL:0000076!6.37e-09!62;CL:0002368!1.88e-08!13;CL:0002327!2.36e-08!4;CL:0000063!5.11e-08!578;CL:0000244!5.75e-08!4;CL:0000731!5.75e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.09e-24;4!CL:0002621;4.59e-15;3!CL:0002166;5.29e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,6.32e-24,4;CL:0002621,3.46e-15,3;CL:0002166,5.68e-15,3;CL:0000066,5.26e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.91e-09!106;DOID:1749!5.61e-08!14;DOID:0050687!1.86e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.06e-07;14!DOID:4929;9.43e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.11e-07,14;DOID:4929,9.44e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005911!9.35e-12!82;UBERON:0001949!4.90e-11!3;UBERON:0005153!6.17e-10!37;UBERON:0001911!2.36e-08!4;UBERON:0005333!2.36e-08!4;UBERON:0008425!2.36e-08!4;UBERON:0005311!2.36e-08!4;UBERON:0004807!6.91e-08!28;UBERON:0005157!1.02e-07!51;UBERON:0006554!1.02e-07!44;UBERON:0004119!1.31e-07!169;UBERON:0000925!1.31e-07!169;UBERON:0006595!1.31e-07!169;UBERON:0001008!1.72e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.09e-24;4!UBERON:0001949;4.59e-15;3!UBERON:0004913;2.93e-12;1!UBERON:0003703;2.93e-12;1!UBERON:0001174;2.93e-12;1!UBERON:0004914;2.93e-12;1!UBERON:0004807;7.34e-12;22!UBERON:0001708;1.73e-11;4!UBERON:0008895;1.73e-11;4!UBERON:0011159;2.27e-09;5!UBERON:0000486;1.50e-08;12!UBERON:0005911;2.96e-07;36!UBERON:0003929;5.84e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,6.32e-24,4;UBERON:0005333,6.32e-24,4;UBERON:0008425,6.32e-24,4;UBERON:0005311,6.32e-24,4;UBERON:0001949,3.46e-15,3;UBERON:0005153,4.71e-13,37;UBERON:0000076,2.78e-12,8;UBERON:0004913,2.93e-12,1;UBERON:0003703,2.93e-12,1;UBERON:0001174,2.93e-12,1;UBERON:0004914,2.93e-12,1;UBERON:0001708,1.82e-11,4;UBERON:0008895,1.82e-11,4;UBERON:0005157,3.87e-10,47;UBERON:0011159,2.36e-09,5;UBERON:0004807,2.77e-09,28;UBERON:0010188,6.16e-08,6;UBERON:0002539,6.16e-08,6;UBERON:0008816,6.16e-08,6;UBERON:0005911,2.72e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28543450377605,0.818238361772504,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34385702559088,2.55195175036296,1.61205340865127,1.16253575405585,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,0,1.20303882181971,0.0920809889358963,0,0,0,0.451199612907412,1.92538342761037,0,0,0.844413031143006,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.826424576804891,0.768760269460425,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0,0.43050537267123,0,0.443430153536676,3.44585100310439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0,0,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.416024019039416,0,0.195984794828755,1.39294730528644,0,0,0,0,0,0,0,0,6.71505430769079,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,0,0,0,0,0,0,0,0,0,0,0,29.8669294158431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.333694205676207,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0.473328002922261,0.766920642832419,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.110284602795,2.48748236736422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@MYH16 | |||
}} |
Revision as of 18:09, 22 January 2014
Short description: | p1@MYH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYH16_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | -444bp_to_ENST00000330888, NR_002147, uc003upw.2_5end |
EntrezGene: | MYH16 |
HGNC: | 31038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 6.32e-24 | 4 |
gingival epithelial cell | 3.46e-15 | 3 |
epithelial cell of Malassez | 5.68e-15 | 3 |
epithelial cell | 5.26e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 6.32e-24 | 4 |
mammary bud | 6.32e-24 | 4 |
mammary ridge | 6.32e-24 | 4 |
mammary placode | 6.32e-24 | 4 |
gingival epithelium | 3.46e-15 | 3 |
epithelial bud | 4.71e-13 | 37 |
external ectoderm | 2.78e-12 | 8 |
hepatopancreatic ampulla | 2.93e-12 | 1 |
extrahepatic bile duct | 2.93e-12 | 1 |
common bile duct | 2.93e-12 | 1 |
duodenal papilla | 2.93e-12 | 1 |
jaw skeleton | 1.82e-11 | 4 |
splanchnocranium | 1.82e-11 | 4 |
epithelial fold | 3.87e-10 | 47 |
primary subdivision of cranial skeletal system | 2.36e-09 | 5 |
respiratory system epithelium | 2.77e-09 | 28 |
protuberance | 6.16e-08 | 6 |
pharyngeal arch | 6.16e-08 | 6 |
embryonic head | 6.16e-08 | 6 |
endo-epithelium | 2.72e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.11e-07 | 14 |
tubular adenocarcinoma | 9.44e-07 | 2 |