FFCP PHASE1:Hg19::chr7:107580670..107580691,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6486 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=317bp_to_ENST00000468999_5end | |||
|description=CAGE_peak_5_at_LAMB1_5end | |||
|id=chr7:107580670..107580691,- | |||
|ontology_enrichment_celltype=CL:0000055!1.38e-16!180;CL:0002321!4.16e-13!248;CL:0000220!7.10e-13!246;CL:0000057!9.95e-12!75;CL:0000548!1.77e-10!679;CL:0000004!1.77e-10!679;CL:0000255!1.77e-10!679;CL:0000222!4.70e-10!119;CL:0000012!6.64e-10!682;CL:0000144!1.36e-08!625;CL:0002620!6.20e-07!23;CL:0000066!8.18e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000134;8.93e-09;55!CL:0000723;1.73e-08;61!CL:0000048;4.40e-08;58!CL:0002494;3.71e-07;16!CL:0002138;8.96e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.89e-08,76;CL:0000222,2.37e-08,121;CL:0002494,3.60e-07,16 | |||
|ontology_enrichment_development_v019=CL:0005022;8.96e-07;6 | |||
|ontology_enrichment_disease=DOID:2394!5.74e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.61e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.44e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.24e-09!95;UBERON:0002199!6.36e-09!45;UBERON:0002416!6.36e-09!45;UBERON:0003914!1.51e-07!118;UBERON:0000486!3.13e-07!82;UBERON:0004872!3.84e-07!84;UBERON:0002097!8.59e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.32e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,8.77e-08,14;UBERON:0002199,1.44e-07,46;UBERON:0002416,1.44e-07,46;UBERON:0000948,7.54e-07,24;UBERON:0005498,7.54e-07,24;UBERON:0004140,7.54e-07,24;UBERON:0009881,7.54e-07,24;UBERON:0004141,7.54e-07,24;UBERON:0003084,7.54e-07,24;UBERON:0007005,7.54e-07,24;UBERON:0004139,7.54e-07,24;UBERON:0004291,7.54e-07,24 | |||
|phase1_expression=2.18014055124668,4.28201047781966,1.69145284915165,1.0007329835313,4.91657203870017,1.74467704820074,10.1319951267324,1.26343974685366,4.44015567939725,0,0,0,0.791300934685361,0.990130823680373,3.31397375727916,0,2.41077811209591,0.730310090387373,2.92759679274304,0,0.204000691244253,0,0.286235987131057,0.958120975510189,0.502170558379211,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,2.68280343881454,1.02290049474824,1.0843174571537,0,1.88300474649071,0.795285947051099,0.486634870302636,1.22895262313288,0.886917589850256,1.31752178539689,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0,1.73570250803797,0.56530794192401,1.25849830862972,5.77747888074142,0.417989933073621,2.32575083252396,2.13459757612026,1.33888245105868,0.402829317109147,0.760272105718513,1.70843440283719,1.47065232138347,3.24056779152704,1.25019619597712,0.898117490504679,0.450445921933289,0,0.949265659568129,0.916008719652036,0,0,0,0,2.15271869829786,1.05927344650575,13.7681577959431,1.06400514659507,0,3.20246987189115,2.22000793575444,0.622422070799533,1.34710672069688,1.9615428373615,0.454072282934794,3.45705554687999,0,2.18512053781224,0,2.98897361103602,0.822041490506354,0.809364721840658,0.702254033511242,0.816616685019573,1.10550885580591,0.309977343527296,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.500474079487857,0,0.877955241761676,0,0.600952235626387,1.13432183160021,3.40840307808838,2.56268866582281,1.05965950579781,3.30100205692843,1.33968288009971,1.8034837803194,1.30281799432113,1.35021065793013,0.876933046450788,2.77677151668526,0.828449087780694,1.45481451136931,3.19508633264953,1.10827308050404,1.18692414617341,1.15956511897978,0,0.286804595389004,0.487894824518382,0.795178609928912,0.580969714347592,0.518305275076852,0.504641701751257,0,1.56449532329816,9.64861407289328,2.76269842704961,2.3218396401599,2.16563844500876,0.709840800239063,0.337169380156203,0.964044119533928,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,1.22988438543114,0.686271241194102,0.329250856225877,0,0.402115889646523,1.11106134190236,0.651616610620649,0,1.44331342025273,0.231860809950154,1.40890433082986,2.45422961193825,4.1668696131895,3.80508304469197,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0.806026704325635,1.45316969256981,0.766765358330422,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0.308482478109971,1.50171528921959,0.285826432630578,0.112131084345361,1.30788020649984,1.39342743059805,0.775630294546667,3.57656445851882,3.381211010224,2.12750493267896,0,0.257207374262142,0,0,4.86125178437702,5.42621605391443,0.823240336780769,0.65147236858747,3.909311436168,0,1.80863626235752,2.61460037580088,1.59956785891291,0,0,0,2.15662369942424,2.29723871668228,0,0.579125226670317,1.2328579353023,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,2.82190430954022,2.00068208423871,1.08506009479894,0.415941723061614,0.535286966391485,0.315404830067869,0.234282829985426,0.300946099727719,0,2.0694614258501,1.32845119707087,1.10621501125022,1.47702144595741,0.391602314925481,0.686286847621712,0,0,0,0.303127571446259,0,0.604780586659361,0.744323423456331,0.920771839728375,1.12264037773229,1.15325234330131,0.511707249066704,1.12597744800525,1.48418066444991,1.69630663182921,2.84098760501003,0.9033987161519,2.59627214591811,1.97557643381931,1.32945394550784,1.00253235151642,0.828728900423067,1.26295892981067,1.63882051206045,2.62248829918848,0,1.77135275340154,0.784349769176855,0,3.16654886678627,1.13733384070897,0.340187410553031,2.37507507712353,0,1.08378575017541,1.00337954770971,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0.183138929636687,0,0.574265537996172,0.650060246036521,0,1.16004861950546,1.54048617114644,2.30255512089194,0.413509717453592,3.33002759091648,3.91545073568417,0.852266274161009,1.69160867728801,1.15699440752685,0.960950336825531,0.255225424989168,0.708104465988849,0,1.88887408098384,0,0.616067160352178,0.532306030317022,0,1.29726953372744,0.286249773483982,0.744316738719335,0.316379424718726,0.38126038784765,0,5.13526785640705,0,0,2.15846949099978,2.47083326762449,0.824686816419805,0.606547444719948,0,1.26377536871694,0,4.38684281336312,0,1.09199929126389,3.81794666275024,1.13008116620243,1.65409603063837,2.65375590096488,0.438450885253763,0.578775534266688,2.62357900818653,0.202910376962704,0.6196469961995,0.563391205064483,0.143411352204052,0.589494246078727,0.35667105148125,0.354761064070598,0.633322905892992,0.658589785919804,0,0,0.288666338176536,1.34060455107157,0,0.376575203107117,0.86101074534246,1.68471475667626,0,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146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| |||
|short_description=p5@LAMB1 | |||
}} |
Revision as of 18:46, 22 January 2014
Short description: | p5@LAMB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAMB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 317bp_to_ENST00000468999_5end |
EntrezGene: | LAMB1 |
HGNC: | 6486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.89e-08 | 76 |
mesodermal cell | 2.37e-08 | 121 |
cardiocyte | 3.60e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 8.77e-08 | 14 |
integument | 1.44e-07 | 46 |
integumental system | 1.44e-07 | 46 |
heart | 7.54e-07 | 24 |
primitive heart tube | 7.54e-07 | 24 |
primary heart field | 7.54e-07 | 24 |
anterior lateral plate mesoderm | 7.54e-07 | 24 |
heart tube | 7.54e-07 | 24 |
heart primordium | 7.54e-07 | 24 |
cardiac mesoderm | 7.54e-07 | 24 |
cardiogenic plate | 7.54e-07 | 24 |
heart rudiment | 7.54e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.44e-10 | 14 |