FFCP PHASE1:Hg19::chr8:87755949..87755968,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54714 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2153 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQW8 | |||
|association_with_transcript=-46bp_to_ENST00000320005,NM_019098_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_3_at_CNGB3_5end | |||
|id=chr8:87755949..87755968,- | |||
|ontology_enrichment_celltype=CL:0002586!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.46e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.30e-37!2;UBERON:0002757!1.30e-37!2;UBERON:0010134!1.30e-37!2;UBERON:0002784!1.30e-37!2;UBERON:0005408!1.30e-37!2;UBERON:0001899!1.30e-37!2;UBERON:0006331!1.29e-24!3;UBERON:0002298!1.09e-20!8;UBERON:0002146!2.25e-19!1;UBERON:0005623!2.25e-19!1;UBERON:0003296!2.26e-19!4;UBERON:0010133!2.26e-19!4;UBERON:0002038!3.25e-19!1;UBERON:0009661!3.25e-19!1;UBERON:0003075!3.06e-16!86;UBERON:0007284!3.06e-16!86;UBERON:0005743!5.01e-16!86;UBERON:0000966!1.51e-15!5;UBERON:0005388!1.51e-15!5;UBERON:0001802!1.51e-15!5;UBERON:0002346!1.67e-15!90;UBERON:0000073!1.73e-14!94;UBERON:0001016!1.73e-14!94;UBERON:0000955!4.22e-12!69;UBERON:0006238!4.22e-12!69;UBERON:0001894!1.68e-11!7;UBERON:0006222!1.68e-11!7;UBERON:0000033!4.11e-11!123;UBERON:0001049!4.70e-11!57;UBERON:0005068!4.70e-11!57;UBERON:0006241!4.70e-11!57;UBERON:0007135!4.70e-11!57;UBERON:0002616!1.11e-10!59;UBERON:0000153!1.42e-10!129;UBERON:0007811!1.42e-10!129;UBERON:0003056!2.10e-10!61;UBERON:0002950!2.72e-10!2;UBERON:0001891!2.72e-10!2;UBERON:0009616!2.72e-10!2;UBERON:0001954!3.27e-10!2;UBERON:0003022!3.27e-10!2;UBERON:0002421!3.27e-10!2;UBERON:0002600!3.27e-10!2;UBERON:0001017!3.55e-10!82;UBERON:0002148!3.58e-10!2;UBERON:0009662!3.58e-10!2;UBERON:0004121!7.80e-10!169;UBERON:0000924!1.36e-09!173;UBERON:0006601!1.36e-09!173;UBERON:0007023!1.41e-09!115;UBERON:0002308!7.16e-09!9;UBERON:0000125!7.16e-09!9;UBERON:0000970!7.87e-09!20;UBERON:0002104!1.95e-08!21;UBERON:0000020!9.44e-08!23;UBERON:0001032!1.89e-07!24;UBERON:0004456!1.89e-07!24;UBERON:0001781!2.32e-07!3;UBERON:0001782!2.32e-07!3;UBERON:0005424!2.32e-07!3;UBERON:0003978!2.47e-07!3;UBERON:0009751!2.47e-07!3;UBERON:0000946!2.47e-07!3;UBERON:0002523!2.47e-07!3;UBERON:0005983!2.47e-07!3;UBERON:0002165!2.47e-07!3;UBERON:0002062!2.47e-07!3;UBERON:0007280!2.47e-07!3;UBERON:0001896!2.63e-07!3;UBERON:0005290!2.63e-07!3;UBERON:0010096!2.63e-07!3;UBERON:0002780!3.15e-07!41;UBERON:0001890!3.15e-07!41;UBERON:0006240!3.15e-07!41;UBERON:0000988!3.35e-07!3;UBERON:0003080!4.57e-07!42;UBERON:0004733!6.94e-07!12;UBERON:0002028!6.94e-07!12;UBERON:0007277!6.94e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0000966;3.26e-11;5!UBERON:0005388;3.26e-11;5!UBERON:0001802;3.26e-11;5!UBERON:0000970;6.30e-11;20!UBERON:0002104;1.86e-10;21!UBERON:0000020;1.22e-09;23!UBERON:0001032;2.78e-09;24!UBERON:0004456;2.78e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0000966,1.44e-09,6;UBERON:0005388,1.44e-09,6;UBERON:0001802,1.44e-09,6;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0003056,4.28e-08,61;UBERON:0002368,9.98e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8206193320886,39.6814792218212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50167904618297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CNGB3 | |||
}} |
Revision as of 22:47, 22 January 2014
Short description: | p3@CNGB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNGB3_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -46bp_to_ENST00000320005, NM_019098_5end |
EntrezGene: | CNGB3 |
HGNC: | 2153 |
UniProt: | Q9NQW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
eye | 1.86e-10 | 21 |
visual system | 1.86e-10 | 21 |
retina | 1.44e-09 | 6 |
photoreceptor array | 1.44e-09 | 6 |
posterior segment of eyeball | 1.44e-09 | 6 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
pre-chordal neural plate | 4.28e-08 | 61 |
endocrine gland | 9.98e-07 | 35 |