DOID:3149: Difference between revisions

Revision as of 10:34, 12 September 2014

keratoacanthoma

Namespace:

disease_ontology

Xrefs:

Synonyms:

"keratoacanthoma" EXACT [CSP2005:2020-2121]
"keratoacanthoma" EXACT [MTH:NOCODE]
"Keratoacanthoma (disorder)" EXACT [SNOMEDCT_2005_07_31:254662007]
"Keratoacanthoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:58220003]

Ontology association Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies. link to ontology dataset data

Parents

is_a:	DOID:3151(skin squamous cell carcinoma)

Children

is a:	FF:10713-109I2 (),FF:10791-110H8 (keratoacanthoma cell line:HKA-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

10713-109I2
10791-110H8 (keratoacanthoma cell line:HKA-1)

Mouse (Mus musculus)

10713-109I2
10791-110H8 (keratoacanthoma cell line:HKA-1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3149 (keratoacanthoma), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Show entries

Search:

P-value	FFCP	Short description
2.55e-98	FFCP PHASE2:Hg19::chr7:101448176..101448184,+	p@chr7:101448176..101448184, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448249..101448254,+	p@chr7:101448249..101448254, +
2.55e-98	FFCP PHASE2:Hg19::chr7:101448249..101448254,+	p@chr7:101448249..101448254, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448277..101448287,+	p@chr7:101448277..101448287, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448101..101448113,+	p@chr7:101448101..101448113, +
2.55e-98	FFCP PHASE1:Hg19::chr8:123875147..123875159,+	p26@ZHX2
2.55e-98	FFCP PHASE2:Hg19::chr7:101448277..101448287,+	p@chr7:101448277..101448287, +
2.55e-98	FFCP PHASE1:Hg19::chr1:153431372..153431378,-	p4@S100A7
2.55e-98	FFCP PHASE2:Hg19::chr7:101448101..101448113,+	p@chr7:101448101..101448113, +
2.55e-98	FFCP PHASE1:Hg19::chr7:101448176..101448184,+	p@chr7:101448176..101448184, +
2.55e-98	FFCP PHASE2:Hg19::chr8:123875147..123875159,+	p26@ZHX2
2.55e-98	FFCP PHASE2:Hg19::chr1:153431372..153431378,-	p4@S100A7
1.23e-66	FFCP PHASE1:Hg19::chr9:97563078..97563086,+	p@chr9:97563078..97563086, +
1.23e-66	FFCP PHASE2:Hg19::chr9:97563078..97563086,+	p@chr9:97563078..97563086, +
1.23e-66	FFCP PHASE1:Hg19::chr20:49047228..49047236,-	p@chr20:49047228..49047236, -
1.23e-66	FFCP PHASE2:Hg19::chr20:49047228..49047236,-	p@chr20:49047228..49047236, -
2.39e-66	FFCP PHASE1:Hg19::chr17:19648916..19648937,-	p10@ALDH3A1
2.39e-66	FFCP PHASE1:Hg19::chr1:76127067..76127073,-	p@chr1:76127067..76127073, -
2.39e-66	FFCP PHASE1:Hg19::chr18:61254400..61254410,+	p8@SERPINB13
2.39e-66	FFCP PHASE2:Hg19::chr1:76127067..76127073,-	p@chr1:76127067..76127073, -
2.39e-66	FFCP PHASE2:Hg19::chr18:61254400..61254410,+	p8@SERPINB13
2.39e-66	FFCP PHASE2:Hg19::chr17:19648916..19648937,-	p10@ALDH3A1
4.66e-66	FFCP PHASE2:Hg19::chr17:48072063..48072074,-	p5@DLX3
4.66e-66	FFCP PHASE1:Hg19::chr1:10980427..10980431,-	p@chr1:10980427..10980431, -
4.66e-66	FFCP PHASE1:Hg19::chr3:193809263..193809278,+	p1@ENST00000457815
4.66e-66	FFCP PHASE2:Hg19::chr1:10980427..10980431,-	p@chr1:10980427..10980431, -
4.66e-66	FFCP PHASE2:Hg19::chr13:28542963..28542973,-	p1@CU677005
4.66e-66	FFCP PHASE2:Hg19::chr3:193809263..193809278,+	p1@ENST00000457815
4.66e-66	FFCP PHASE1:Hg19::chr19:51517875..51517889,-	p3@AK026045
4.66e-66	FFCP PHASE1:Hg19::chr17:48072063..48072074,-	p5@DLX3
4.66e-66	FFCP PHASE1:Hg19::chr2:178179611..178179619,-	p4@ENST00000443132
4.66e-66	FFCP PHASE1:Hg19::chr1:18085798..18085805,+	p@chr1:18085798..18085805, +
4.66e-66	FFCP PHASE2:Hg19::chr19:51517875..51517889,-	p3@AK026045
4.66e-66	FFCP PHASE2:Hg19::chr2:178179611..178179619,-	p4@ENST00000443132
4.66e-66	FFCP PHASE2:Hg19::chr1:18085798..18085805,+	p@chr1:18085798..18085805, +
4.66e-66	FFCP PHASE1:Hg19::chr13:28542963..28542973,-	p1@CU677005
1.46e-50	FFCP PHASE2:Hg19::chr16:55600644..55600645,+	p2@CAPNS2
1.46e-50	FFCP PHASE1:Hg19::chr5:1884077..1884085,+	p1@ENST00000506335
1.46e-50	FFCP PHASE2:Hg19::chr5:1884077..1884085,+	p1@ENST00000506335
1.46e-50	FFCP PHASE1:Hg19::chr1:151826151..151826159,-	p3@THEM5
1.46e-50	FFCP PHASE2:Hg19::chr1:151826151..151826159,-	p3@THEM5
1.46e-50	FFCP PHASE1:Hg19::chr16:55600644..55600645,+	p2@CAPNS2
2.42e-50	FFCP PHASE2:Hg19::chr12:130647145..130647153,+	p3@FZD10
2.42e-50	FFCP PHASE1:Hg19::chr8:120233966..120233975,+	p@chr8:120233966..120233975, +
2.42e-50	FFCP PHASE2:Hg19::chr8:120233966..120233975,+	p@chr8:120233966..120233975, +
2.42e-50	FFCP PHASE1:Hg19::chr7:101448204..101448229,+	p@chr7:101448204..101448229, +
2.42e-50	FFCP PHASE2:Hg19::chr7:101448204..101448229,+	p@chr7:101448204..101448229, +
2.42e-50	FFCP PHASE1:Hg19::chr1:86921028..86921032,+	p@chr1:86921028..86921032, +
2.42e-50	FFCP PHASE2:Hg19::chr1:86921028..86921032,+	p@chr1:86921028..86921032, +
2.42e-50	FFCP PHASE1:Hg19::chr8:123875131..123875140,+	p25@ZHX2
2.42e-50	FFCP PHASE1:Hg19::chr17:77774350..77774360,+	p@chr17:77774350..77774360, +
2.42e-50	FFCP PHASE2:Hg19::chr8:123875131..123875140,+	p25@ZHX2
2.42e-50	FFCP PHASE2:Hg19::chr17:77774350..77774360,+	p@chr17:77774350..77774360, +
2.42e-50	FFCP PHASE1:Hg19::chr12:130647145..130647153,+	p3@FZD10
3.99e-50	FFCP PHASE1:Hg19::chr2:234526341..234526346,+	p1@UGT1A8
3.99e-50	FFCP PHASE2:Hg19::chr2:234526341..234526346,+	p1@UGT1A8
6.58e-50	FFCP PHASE2:Hg19::chr4:152117165..152117168,+	p@chr4:152117165..152117168, +
6.58e-50	FFCP PHASE2:Hg19::chr14:65406349..65406358,+	p@chr14:65406349..65406358, +
6.58e-50	FFCP PHASE2:Hg19::chr10:127591699..127591713,-	p@chr10:127591699..127591713, -
6.58e-50	FFCP PHASE1:Hg19::chr10:127591699..127591713,-	p@chr10:127591699..127591713, -
6.58e-50	FFCP PHASE1:Hg19::chr3:136885144..136885147,+	p@chr3:136885144..136885147, +
6.58e-50	FFCP PHASE2:Hg19::chr3:136885144..136885147,+	p@chr3:136885144..136885147, +
6.58e-50	FFCP PHASE1:Hg19::chr1:153430422..153430443,-	p3@S100A7
6.58e-50	FFCP PHASE2:Hg19::chr10:54259346..54259353,+	p@chr10:54259346..54259353, +
6.58e-50	FFCP PHASE1:Hg19::chr10:54259346..54259353,+	p@chr10:54259346..54259353, +
6.58e-50	FFCP PHASE2:Hg19::chr1:153430422..153430443,-	p3@S100A7
6.58e-50	FFCP PHASE1:Hg19::chr14:65406349..65406358,+	p@chr14:65406349..65406358, +
6.58e-50	FFCP PHASE1:Hg19::chr1:118570948..118570964,-	p@chr1:118570948..118570964, -
6.58e-50	FFCP PHASE2:Hg19::chr1:118570948..118570964,-	p@chr1:118570948..118570964, -
6.58e-50	FFCP PHASE1:Hg19::chr4:152117165..152117168,+	p@chr4:152117165..152117168, +
6.62e-41	FFCP PHASE1:Hg19::chr17:39674844..39674854,+	p@chr17:39674844..39674854, +
6.62e-41	FFCP PHASE1:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +
6.62e-41	FFCP PHASE2:Hg19::chr10:5567644..5567657,+	p@chr10:5567644..5567657, +
6.62e-41	FFCP PHASE1:Hg19::chr1:152572708..152572714,+	p1@LCE3C
6.62e-41	FFCP PHASE2:Hg19::chr1:152572708..152572714,+	p1@LCE3C
6.62e-41	FFCP PHASE2:Hg19::chr17:39674844..39674854,+	p@chr17:39674844..39674854, +
9.91e-41	FFCP PHASE2:Hg19::chr8:123875175..123875188,+	p22@ZHX2
9.91e-41	FFCP PHASE2:Hg19::chr3:141678730..141678768,-	p@chr3:141678730..141678768, -
9.91e-41	FFCP PHASE1:Hg19::chr17:39675950..39675974,-	p@chr17:39675950..39675974, -
9.91e-41	FFCP PHASE1:Hg19::chr5:67829374..67829382,-	p1@ENST00000515199
9.91e-41	FFCP PHASE2:Hg19::chr5:67829374..67829382,-	p1@ENST00000515199
9.91e-41	FFCP PHASE2:Hg19::chr17:39675950..39675974,-	p@chr17:39675950..39675974, -
9.91e-41	FFCP PHASE1:Hg19::chr8:123875175..123875188,+	p22@ZHX2
9.91e-41	FFCP PHASE1:Hg19::chr3:141678730..141678768,-	p@chr3:141678730..141678768, -
1.48e-40	FFCP PHASE1:Hg19::chr10:4951559..4951578,+	p@chr10:4951559..4951578, +
1.48e-40	FFCP PHASE1:Hg19::chr17:39767356..39767365,+	p@chr17:39767356..39767365, +
1.48e-40	FFCP PHASE2:Hg19::chr17:39767356..39767365,+	p@chr17:39767356..39767365, +
1.48e-40	FFCP PHASE2:Hg19::chr10:4951559..4951578,+	p@chr10:4951559..4951578, +
2.21e-40	FFCP PHASE2:Hg19::chr21:23573043..23573054,+	p@chr21:23573043..23573054, +
2.21e-40	FFCP PHASE1:Hg19::chr22:48134043..48134048,+	p@chr22:48134043..48134048, +
2.21e-40	FFCP PHASE2:Hg19::chr22:48134043..48134048,+	p@chr22:48134043..48134048, +
2.21e-40	FFCP PHASE1:Hg19::chr21:23573043..23573054,+	p@chr21:23573043..23573054, +
3.3e-40	FFCP PHASE2:Hg19::chr5:16492681..16492683,+	p@chr5:16492681..16492683, +
3.3e-40	FFCP PHASE2:Hg19::chr17:7990883..7990893,-	p5@ALOX12B
3.3e-40	FFCP PHASE2:Hg19::chr10:127591732..127591739,-	p@chr10:127591732..127591739, -
3.3e-40	FFCP PHASE1:Hg19::chr10:127591732..127591739,-	p@chr10:127591732..127591739, -
3.3e-40	FFCP PHASE1:Hg19::chr4:15937680..15937694,+	p@chr4:15937680..15937694, +
3.3e-40	FFCP PHASE2:Hg19::chr4:15937680..15937694,+	p@chr4:15937680..15937694, +
3.3e-40	FFCP PHASE1:Hg19::chr5:16492681..16492683,+	p@chr5:16492681..16492683, +
3.3e-40	FFCP PHASE1:Hg19::chr17:7990883..7990893,-	p5@ALOX12B

Showing 1 to 100 of 100 entries

@@ Line 1: / Line 1: @@
 {{DOID
-|id=DOID:3149
+|alt_id=
-|name=keratoacanthoma
-|namespace=disease_ontology
-|def=
-|xref=MSH:D007636;;NCI:C3146;;SNOMEDCT_2010_1_31:156395005;;SNOMEDCT_2010_1_31:201061007;;SNOMEDCT_2010_1_31:201064004;;SNOMEDCT_2010_1_31:254662007;;SNOMEDCT_2010_1_31:267858008;;SNOMEDCT_2010_1_31:58220003;;UMLS_CUI:C0022572
-|is_a=DOID:3151
-|synonym="keratoacanthoma" EXACT [CSP2005:2020-2121];;"keratoacanthoma" EXACT [MTH:NOCODE];;"Keratoacanthoma (disorder)" EXACT [SNOMEDCT_2005_07_31:254662007];;"Keratoacanthoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:58220003]
 |comment=
-|alt_id=
-|disjoint_from=
-|union_of=
 |created_by=
-|obo_creation_date=
+|def=
-|subset=
 |derives_from=
 |develops_from=
+|disjoint_from=
 |has_quality=
+|id=DOID:3149
+|is_a=DOID:3151
+|is_obsolete=
 |located_in=
+|name=keratoacanthoma
+|namespace=disease_ontology
+|obo_creation_date=
 |part_of=
+|preceded_by=
 |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
-|is_obsolete=
+|subset=
-|preceded_by=
+|synonym="keratoacanthoma" EXACT [CSP2005:2020-2121];;"keratoacanthoma" EXACT [MTH:NOCODE];;"Keratoacanthoma (disorder)" EXACT [SNOMEDCT_2005_07_31:254662007];;"Keratoacanthoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:58220003]
+|union_of=
+|xref=MSH:D007636;;NCI:C3146;;SNOMEDCT_2010_1_31:156395005;;SNOMEDCT_2010_1_31:201061007;;SNOMEDCT_2010_1_31:201064004;;SNOMEDCT_2010_1_31:254662007;;SNOMEDCT_2010_1_31:267858008;;SNOMEDCT_2010_1_31:58220003;;UMLS_CUI:C0022572
 }}

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DOID:3149: Difference between revisions

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Revision as of 10:34, 12 September 2014

Ontology Tree: Loaded from BioPortal

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