DOID:4468: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id=DOID:2617;;DOID:4940 | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="An adenocarcinoma that derives_from epithelial cells which have clear cytoplasm." [url:http://www.pathconsultddx.com/pathCon/diagnosis?pii | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:4468 | |||
|is_a=DOID:299 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=clear cell adenocarcinoma | |||
|namespace=disease_ontology | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym="Clear cell adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:30546008];;"Clear cell adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189633003];;"malignant Mesonephroma" EXACT [NCI2004_11_17:C4072];;"Mesonephroid Clear cell carcinoma" EXACT [NCI2004_11_17:C3766];;"mesonephroma" EXACT [];;"Mesonephroma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189861007];;"Mesonephroma, malignant (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:2221008];;"Water-Clear cell adenocarcinoma" EXACT [NCI2004_11_17:C4156];;"Water-clear cell adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:80727009];;"Water-clear cell carcinoma" EXACT [];;"Wolffian duct neoplasm" EXACT [NCI2004_11_17:C6782] | ||
|union_of= | |||
|xref=MSH:D008649;;NCI:C4072;;SNOMEDCT_2010_1_31:189633003;;SNOMEDCT_2010_1_31:189861007;;SNOMEDCT_2010_1_31:2221008;;SNOMEDCT_2010_1_31:30546008;;SNOMEDCT_2010_1_31:80727009;;UMLS_CUI:C0025490;;UMLS_CUI:C0206681;;UMLS_CUI:C0334322 | |||
}} | }} |
Revision as of 10:35, 12 September 2014
Name: | clear cell adenocarcinoma | |
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Namespace: | disease_ontology | |
Definition: | "An adenocarcinoma that derives_from epithelial cells which have clear cytoplasm." [url:http://www.pathconsultddx.com/pathCon/diagnosis?pii | |
Xrefs: |
| |
Synonyms: |
"Clear cell adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:30546008] "Clear cell adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189633003] "malignant Mesonephroma" EXACT [NCI2004_11_17:C4072] "Mesonephroid Clear cell carcinoma" EXACT [NCI2004_11_17:C3766] "mesonephroma" EXACT [] "Mesonephroma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189861007] "Mesonephroma, malignant (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:2221008] "Water-Clear cell adenocarcinoma" EXACT [NCI2004_11_17:C4156] "Water-clear cell adenocarcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:80727009] "Water-clear cell carcinoma" EXACT [] "Wolffian duct neoplasm" EXACT [NCI2004_11_17:C6782] | |
Alt_id: |
DOID:2617 DOID:4940 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:299(adenocarcinoma) |
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Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10636-108I6 (clear cell carcinoma cell line:TEN)
- 10638-108I8 (clear cell carcinoma cell line:JHOC-5)
- 10652-109B4
- 10656-109B8
- 10682-109E7
- 10780-110G6
Mouse (Mus musculus)
- 10636-108I6 (clear cell carcinoma cell line:TEN)
- 10638-108I8 (clear cell carcinoma cell line:JHOC-5)
- 10652-109B4
- 10656-109B8
- 10682-109E7
- 10780-110G6
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4468 (clear cell adenocarcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data