DOID:450: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:450 | |||
|is_a=DOID:423 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=myotonic disease | |||
|namespace=disease_ontology | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=ICD9CM:359.2;;MSH:D020967;;NCI:C84913;;SNOMEDCT_2010_1_31:155096007;;SNOMEDCT_2010_1_31:193237003;;SNOMEDCT_2010_1_31:193240003;;SNOMEDCT_2010_1_31:267713009;;UMLS_CUI:C0553604 | |||
}} | }} |
Revision as of 10:35, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:423(myopathy) |
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Children
is a: | DOID:11722 (myotonic dystrophy) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Mouse (Mus musculus)
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:450 (myotonic disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data