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{{UBERON
{{UBERON
|id=UBERON:0003975
|alt_id=
|name=internal female genitalia
|namespace=
|def="the internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina." [MP:0009209]
|xref=BTO:0003099;;FMA:45654;;SCTID:303518005
|is_a=UBERON:0003134;;UBERON:0004175
|synonym="female internal genitalia" EXACT [FMA:45654];;"internal female genital organ" EXACT [BTO:0003099];;"internal genitalia of female reproductive system" EXACT [OBOL:automatic];;"organa genitalia feminina interna" RELATED [BTO:0003099]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="the internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina." [MP:0009209]
|subset=organ_slim
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003975
|is_a=UBERON:0003134 ;;UBERON:0004175
|is_obsolete=
|located_in=
|located_in=
|name=internal female genitalia
|namespace=
|obo_creation_date=
|part_of=UBERON:0000474
|part_of=UBERON:0000474
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=organ_slim
|preceded_by=
|synonym="female internal genitalia" EXACT [FMA:45654];;"internal female genital organ" EXACT [BTO:0003099];;"internal genitalia of female reproductive system" EXACT [OBOL:automatic];;"organa genitalia feminina interna" RELATED [BTO:0003099]
|union_of=
|xref=BTO:0003099;;FMA:45654;;SCTID:303518005
}}
}}

Revision as of 11:26, 12 September 2014

Name:internal female genitalia
Definition:"the internal feminine genital organs, including the ovaries, uterine tubes, uterus, uterine cervix, and vagina." [MP:0009209]
Xrefs:
links:

BTO:0003099
FMA:45654

SCTID:303518005
Synonyms: "female internal genitalia" EXACT [FMA:45654]
"internal female genital organ" EXACT [BTO:0003099]
"internal genitalia of female reproductive system" EXACT [OBOL:automatic]
"organa genitalia feminina interna" RELATED [BTO:0003099]
Subset: organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003134(female reproductive organ),UBERON:0004175(internal genitalia)
part_of:UBERON:0000474(female reproductive system)



Children

is a:UBERON:0006834 (uterus or analog)
part of:UBERON:0000996 (vagina)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003975 (internal female genitalia), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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