UBERON:0007914: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0007914 | |||
|is_a=UBERON:0001474 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=head or neck bone | |||
|namespace= | |||
|obo_creation_date= | |||
|part_of=UBERON:0007811 | |part_of=UBERON:0007811 | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref=MA:0000569 | |||
}} | }} | ||
Revision as of 11:45, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|---|
| part_of: | UBERON:0007811(craniocervical region) |
Children
| is a: | UBERON:0003457 (head bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007914 (head or neck bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42206730..42206739, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_c7b014f591b3f452f653d0547dd682df | p12@B3galt5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_c7b014f591b3f452f653d0547dd682df | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_c7b014f591b3f452f653d0547dd682df | p@chr16:93971357..93971363, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_c7b014f591b3f452f653d0547dd682df | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_c7b014f591b3f452f653d0547dd682df | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_c7b014f591b3f452f653d0547dd682df | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_c7b014f591b3f452f653d0547dd682df | p3@Epyc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_c7b014f591b3f452f653d0547dd682df | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_c7b014f591b3f452f653d0547dd682df | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_c7b014f591b3f452f653d0547dd682df | p15@Mctp1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_c7b014f591b3f452f653d0547dd682df | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_c7b014f591b3f452f653d0547dd682df | p4@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:154459184..154459195, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_c7b014f591b3f452f653d0547dd682df | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_c7b014f591b3f452f653d0547dd682df | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_c7b014f591b3f452f653d0547dd682df | p1@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_c7b014f591b3f452f653d0547dd682df | p@chr15:58022966..58022995, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_c7b014f591b3f452f653d0547dd682df | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_c7b014f591b3f452f653d0547dd682df | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42207375..42207384, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_c7b014f591b3f452f653d0547dd682df | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_c7b014f591b3f452f653d0547dd682df | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_c7b014f591b3f452f653d0547dd682df | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_c7b014f591b3f452f653d0547dd682df | p1@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_c7b014f591b3f452f653d0547dd682df | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_c7b014f591b3f452f653d0547dd682df | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:4689837..4689845, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_c7b014f591b3f452f653d0547dd682df | p@chr8:94180607..94180619, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_c7b014f591b3f452f653d0547dd682df | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_c7b014f591b3f452f653d0547dd682df | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_c7b014f591b3f452f653d0547dd682df | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:144115382..144115389, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_c7b014f591b3f452f653d0547dd682df | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:13572961..13572974, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_c7b014f591b3f452f653d0547dd682df | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_c7b014f591b3f452f653d0547dd682df | p1@Dytn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_c7b014f591b3f452f653d0547dd682df | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_c7b014f591b3f452f653d0547dd682df | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_c7b014f591b3f452f653d0547dd682df | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_c7b014f591b3f452f653d0547dd682df | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_c7b014f591b3f452f653d0547dd682df | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_c7b014f591b3f452f653d0547dd682df | p4@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_c7b014f591b3f452f653d0547dd682df | p1@Tomt |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_c7b014f591b3f452f653d0547dd682df | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_c7b014f591b3f452f653d0547dd682df | p@chr8:13414289..13414295, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_c7b014f591b3f452f653d0547dd682df | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_c7b014f591b3f452f653d0547dd682df | p1@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_c7b014f591b3f452f653d0547dd682df | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_c7b014f591b3f452f653d0547dd682df | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_c7b014f591b3f452f653d0547dd682df | p2@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_c7b014f591b3f452f653d0547dd682df | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_c7b014f591b3f452f653d0547dd682df | p3@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_c7b014f591b3f452f653d0547dd682df | p2@Otof |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_c7b014f591b3f452f653d0547dd682df | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_c7b014f591b3f452f653d0547dd682df | p2@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_c7b014f591b3f452f653d0547dd682df | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_c7b014f591b3f452f653d0547dd682df | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_c7b014f591b3f452f653d0547dd682df | p2@Gm1322 |
