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{{UBERON
{{UBERON
|id=UBERON:0011249
|alt_id=
|name=appendicular skeletal system
|namespace=
|def="Subdivision of the skeletal system which consists of the appendicular skeleton plus associated joints." [UBERON:cjm]
|xref=FMA:7484
|is_a=UBERON:0000075
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Subdivision of the skeletal system which consists of the appendicular skeleton plus associated joints." [UBERON:cjm]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0011249
|is_a=UBERON:0000075
|is_obsolete=
|located_in=
|located_in=
|name=appendicular skeletal system
|namespace=
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=FMA:7484
}}
}}

Revision as of 11:51, 12 September 2014

Name:appendicular skeletal system
Definition:"Subdivision of the skeletal system which consists of the appendicular skeleton plus associated joints." [UBERON:cjm]
Xrefs:
links:
FMA:7484

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000075(subdivision of skeletal system)



Children

part of:UBERON:0002091 (appendicular skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011249 (appendicular skeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.4e-49FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_b0bde04fc9d930a9d5b84801f8bd91ddp26@Myo18a
3.4e-49FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_b0bde04fc9d930a9d5b84801f8bd91ddp26@Myo18a
4.96e-49FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_cbabc9cced35d1a5b747867936cd3eaep@chr9:21934585..21934591, -
4.96e-49FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_cbabc9cced35d1a5b747867936cd3eaep@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_cbabc9cced35d1a5b747867936cd3eaep@chr9:21934585..21934591, -
4.96e-49FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_cbabc9cced35d1a5b747867936cd3eaep@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_cbabc9cced35d1a5b747867936cd3eaep@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_cbabc9cced35d1a5b747867936cd3eaep@chr8:75097542..75097549, +
3.15e-44FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_271ab17e861652883e549b797021c167p@chr6:51525810..51525817, +
3.15e-44FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_271ab17e861652883e549b797021c167p@chr6:51525810..51525817, +
9.78e-40FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_f50096bbe9a33022a5a8bc3233978b03p@chr19:4876870..4876880, -
9.78e-40FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_f50096bbe9a33022a5a8bc3233978b03p@chr19:4876870..4876880, -
1.15e-39FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_8b2844d50c2011fcc0358d7e31f9ab94p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_8b2844d50c2011fcc0358d7e31f9ab94p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_8b2844d50c2011fcc0358d7e31f9ab94p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_8b2844d50c2011fcc0358d7e31f9ab94p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_8b2844d50c2011fcc0358d7e31f9ab94p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_8b2844d50c2011fcc0358d7e31f9ab94p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_8b2844d50c2011fcc0358d7e31f9ab94p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_8b2844d50c2011fcc0358d7e31f9ab94p@chr1:174140324..174140335, -
1.55e-39FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_9551be285c11d056e358de8eabfb6e65p@chr1:174143249..174143260, -
1.55e-39FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_9551be285c11d056e358de8eabfb6e65p@chr1:174143249..174143260, -
3.03e-39FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_d5c4f363dddd61c4d18a11d5215e734fp@chr6:51525869..51525891, +
3.03e-39FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_d5c4f363dddd61c4d18a11d5215e734fp@chr6:51525869..51525891, +
9.31e-39FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_272b1db41fc1e0d11c01c02562bb185cp3@Asb16
9.31e-39FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_272b1db41fc1e0d11c01c02562bb185cp3@Asb16
2.41e-35FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_c1876d97fe9fcb30259dfe69e160767dp@chr7:133604286..133604297, -
2.41e-35FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_c1876d97fe9fcb30259dfe69e160767dp@chr7:133604286..133604297, -
2.95e-35FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_085335a19e1aa197e36b22223d5d61fap5@Pla2g5
2.95e-35FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_085335a19e1aa197e36b22223d5d61fap5@Pla2g5
9.53e-34FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_7be31a2d309bfd1ca305a644b217ceeap2@uc009mdq.1
9.53e-34FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_7be31a2d309bfd1ca305a644b217ceeap2@uc009mdq.1
1.23e-33FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_273abaec81b8f4124a9a55c6b7a1b5c4p3@Mmp9
1.23e-33FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_273abaec81b8f4124a9a55c6b7a1b5c4p3@Mmp9
1.58e-33FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_1c27f2364f056e920707a2aa7a4c23eap2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_1c27f2364f056e920707a2aa7a4c23eap2@Oscar
1.58e-33FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_1c27f2364f056e920707a2aa7a4c23eap@chr1:166815111..166815121, -
1.58e-33FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_1c27f2364f056e920707a2aa7a4c23eap@chr1:166815111..166815121, -
2.04e-33FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_19ceceefbcc2cefe845697544d7f86cep@chr11:75409652..75409664, +
2.04e-33FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_19ceceefbcc2cefe845697544d7f86cep4@Lipc
2.04e-33FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_19ceceefbcc2cefe845697544d7f86cep4@Lipc
2.04e-33FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_19ceceefbcc2cefe845697544d7f86cep@chr11:75409652..75409664, +
3.38e-33FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_64c0cb04eaaab4ca5b222a61e9df799cp6@Sp7
3.38e-33FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_64c0cb04eaaab4ca5b222a61e9df799cp6@Sp7
7.17e-33FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_892d180807b5cd72464801a797ab856ap@chr18:76271498..76271508, +
7.17e-33FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_892d180807b5cd72464801a797ab856ap@chr8:126415826..126415839, +
7.17e-33FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_892d180807b5cd72464801a797ab856ap@chr8:126415826..126415839, +
7.17e-33FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_892d180807b5cd72464801a797ab856ap@chr18:76271498..76271508, +
2.67e-30FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_ae6f0ebda4382e1f373c5e04b5159691p@chr2:32482387..32482399, +
2.67e-30FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_ae6f0ebda4382e1f373c5e04b5159691p@chr2:32482387..32482399, +
1.1e-29FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_7948f07ded3415873ddb3f23585a6688p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_7948f07ded3415873ddb3f23585a6688p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_7948f07ded3415873ddb3f23585a6688p@chr15:58649683..58649688, -
1.1e-29FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_7948f07ded3415873ddb3f23585a6688p@chr15:58649683..58649688, -
1.46e-29FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_8090585d04d877c2dd718caf2c3f4cfbp@chr7:133590998..133591009, -
1.46e-29FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_8090585d04d877c2dd718caf2c3f4cfbp@chr7:133590998..133591009, -
1.73e-29FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_1c560bd16d1c580c307e9cf19783e501p2@Myoz3
1.73e-29FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_1c560bd16d1c580c307e9cf19783e501p2@Myoz3
2.42e-29FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_13d6f03711362502530e0f95df798ab5p2@Myh4
2.42e-29FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_13d6f03711362502530e0f95df798ab5p2@Myh4
7.46e-29FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_46a585db8b715743932105106c3596d0p@chr1:57155729..57155740, -
7.46e-29FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_46a585db8b715743932105106c3596d0p@chr1:57155729..57155740, -
9.26e-29FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_8dd0442d10b7ebb9a4249a6a6a063d33p1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_8dd0442d10b7ebb9a4249a6a6a063d33p@chr11:67056544..67056589, -
9.26e-29FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_8dd0442d10b7ebb9a4249a6a6a063d33p1@Msmp
9.26e-29FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_8dd0442d10b7ebb9a4249a6a6a063d33p@chr11:67056544..67056589, -
1.15e-28FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_f789cd28e99de9b5adb477116a7ae266p@chrY:2858251..2858257, +
1.15e-28FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_f789cd28e99de9b5adb477116a7ae266p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_f789cd28e99de9b5adb477116a7ae266p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_f789cd28e99de9b5adb477116a7ae266p@chrY:2858251..2858257, +
1.43e-28FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_ee396763ff06afb18abea87081329b32p@chr6:34436258..34436292, +
1.43e-28FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_ee396763ff06afb18abea87081329b32p@chr6:34436258..34436292, +
2.2e-28FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_5404635ec7abf384e0eedd5f7229b9f6p@chr11:67069796..67069817, -
2.2e-28FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_5404635ec7abf384e0eedd5f7229b9f6p@chr11:67069796..67069817, -
2.72e-28FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_439a05142800ea318b87e0d2171c9057p@chr8:107702369..107702386, +
2.72e-28FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_439a05142800ea318b87e0d2171c9057p@chr8:107702369..107702386, +
3.45e-28FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_ad09c5871239e0e7fe2bcc08256b8840p1@Siglec15
3.45e-28FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_ad09c5871239e0e7fe2bcc08256b8840p1@Siglec15
6.5e-28FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_befa630eb0d4aece0c79ea02252f01bfp6@Atp2a1
6.5e-28FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_befa630eb0d4aece0c79ea02252f01bfp6@Atp2a1
8.9e-28FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_4c4377fbb8711044673bdca17ccf88f0p7@Atp2a1
8.9e-28FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_4c4377fbb8711044673bdca17ccf88f0p7@Atp2a1
1.42e-27FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_c4ceb1c3ba3d2ab9b649c2d055e42abcp@chr7:133600635..133600663, +
1.42e-27FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_c4ceb1c3ba3d2ab9b649c2d055e42abcp@chr7:133600635..133600663, +
1.42e-27FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_c4ceb1c3ba3d2ab9b649c2d055e42abcp@chr7:133592162..133592188, -
1.42e-27FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_c4ceb1c3ba3d2ab9b649c2d055e42abcp@chr7:133592162..133592188, -
6.75e-27FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_3222ea71e07021a26c72e5c16443b857p4@Sgca
6.75e-27FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_3222ea71e07021a26c72e5c16443b857p4@Sgca
1.66e-26FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_6c5543f40c681d753afb33157a31d76cp1@Mepe
1.66e-26FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_6c5543f40c681d753afb33157a31d76cp1@Mepe
3.47e-26FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_f6f48129cea67f9af682a8bc2ccba440p2@Tm4sf19
3.47e-26FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_f6f48129cea67f9af682a8bc2ccba440p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_f6f48129cea67f9af682a8bc2ccba440p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_f6f48129cea67f9af682a8bc2ccba440p2@Tm4sf19
1.12e-25FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_96d7ad081ddfd52cedcc3cc053c97ba1p5@Col11a2
1.12e-25FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_96d7ad081ddfd52cedcc3cc053c97ba1p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_96d7ad081ddfd52cedcc3cc053c97ba1p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_96d7ad081ddfd52cedcc3cc053c97ba1p5@Col11a2
1.36e-25FFCP PHASE2:Mm9::chr2:180890942..180890956,-#_ae195cad09b7d5d4caea4610e2d6acbbp@chr2:180890942..180890956, -
1.36e-25FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_ae195cad09b7d5d4caea4610e2d6acbbp@chr2:180890942..180890956, -

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